Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP08_F_K02
(848 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR456961-1|CAG33242.1| 286|Homo sapiens SSR1 protein. 130 8e-30
BT007387-1|AAP36051.1| 286|Homo sapiens signal sequence recepto... 130 8e-30
BC007710-1|AAH07710.1| 286|Homo sapiens signal sequence recepto... 130 8e-30
AF156965-1|AAD48778.1| 286|Homo sapiens translocon-associated p... 130 8e-30
AK222809-1|BAD96529.1| 286|Homo sapiens signal sequence recepto... 129 1e-29
AK222762-1|BAD96482.1| 286|Homo sapiens signal sequence recepto... 129 1e-29
AL139095-1|CAI16444.1| 286|Homo sapiens signal sequence recepto... 129 1e-29
AK075562-1|BAC11701.1| 259|Homo sapiens protein ( Homo sapiens ... 128 3e-29
Z12830-1|CAA78290.1| 286|Homo sapiens SSR alpha subunit protein. 127 4e-29
>CR456961-1|CAG33242.1| 286|Homo sapiens SSR1 protein.
Length = 286
Score = 130 bits (313), Expect = 8e-30
Identities = 84/198 (42%), Positives = 108/198 (54%), Gaps = 14/198 (7%)
Frame = +3
Query: 153 LXXFTFLIVPAALLCLGSGN-ILAXA----EXXXXXXXXXIEGEDNQV-VGDDA---LVD 305
L L+ PA +L G +LA A E IE ED++ V +D LV+
Sbjct: 7 LLLLLLLVFPATVLFRGGPRGLLAVAQDLTEDEETVEDSIIEDEDDEAEVEEDEPTDLVE 66
Query: 306 DDESV-----VKSSQDIDTTILFTKPVPSLGDLTFDIQAGYPVEFFVGFINKGSVXYVVE 470
D E ++S DTTILF K G+ D A V+F VGF NKG+ ++VE
Sbjct: 67 DKEEEDVSGEPEASPSADTTILFVK-----GE---DFPANNIVKFLVGFTNKGTEDFIVE 118
Query: 471 SMEASFRYPMDYTYYIQNFTALPYNRXVXPXQEATFAYSFIPNEXXAGXPFGLXVQLNYX 650
S++ASFRYP DY +YIQNFTALP N V P ++ATF YSFIP E G PFGL + LNY
Sbjct: 119 SLDASFRYPQDYQFYIQNFTALPLNTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYK 178
Query: 651 XAXGXAYXXXVYNXTLTL 704
G + V+N T+T+
Sbjct: 179 DLNGNVFQDAVFNQTVTV 196
>BT007387-1|AAP36051.1| 286|Homo sapiens signal sequence receptor,
alpha (translocon-associated protein alpha) protein.
Length = 286
Score = 130 bits (313), Expect = 8e-30
Identities = 84/198 (42%), Positives = 108/198 (54%), Gaps = 14/198 (7%)
Frame = +3
Query: 153 LXXFTFLIVPAALLCLGSGN-ILAXA----EXXXXXXXXXIEGEDNQV-VGDDA---LVD 305
L L+ PA +L G +LA A E IE ED++ V +D LV+
Sbjct: 7 LLLLLLLVFPATVLFRGGPRGLLAVAQDLTEDEETVEDSIIEDEDDEAEVEEDEPTDLVE 66
Query: 306 DDESV-----VKSSQDIDTTILFTKPVPSLGDLTFDIQAGYPVEFFVGFINKGSVXYVVE 470
D E ++S DTTILF K G+ D A V+F VGF NKG+ ++VE
Sbjct: 67 DKEEEDVSGEPEASPSADTTILFVK-----GE---DFPANNIVKFLVGFTNKGTEDFIVE 118
Query: 471 SMEASFRYPMDYTYYIQNFTALPYNRXVXPXQEATFAYSFIPNEXXAGXPFGLXVQLNYX 650
S++ASFRYP DY +YIQNFTALP N V P ++ATF YSFIP E G PFGL + LNY
Sbjct: 119 SLDASFRYPQDYQFYIQNFTALPLNTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYK 178
Query: 651 XAXGXAYXXXVYNXTLTL 704
G + V+N T+T+
Sbjct: 179 DLNGNVFQDAVFNQTVTV 196
>BC007710-1|AAH07710.1| 286|Homo sapiens signal sequence receptor,
alpha (translocon-associated protein alpha) protein.
Length = 286
Score = 130 bits (313), Expect = 8e-30
Identities = 84/198 (42%), Positives = 108/198 (54%), Gaps = 14/198 (7%)
Frame = +3
Query: 153 LXXFTFLIVPAALLCLGSGN-ILAXA----EXXXXXXXXXIEGEDNQV-VGDDA---LVD 305
L L+ PA +L G +LA A E IE ED++ V +D LV+
Sbjct: 7 LLLLLLLVFPATVLFRGGPRGLLAVAQDLTEDEETVEDSIIEDEDDEAEVEEDEPTDLVE 66
Query: 306 DDESV-----VKSSQDIDTTILFTKPVPSLGDLTFDIQAGYPVEFFVGFINKGSVXYVVE 470
D E ++S DTTILF K G+ D A V+F VGF NKG+ ++VE
Sbjct: 67 DKEEEDVSGEPEASPSADTTILFVK-----GE---DFPANNIVKFLVGFTNKGTEDFIVE 118
Query: 471 SMEASFRYPMDYTYYIQNFTALPYNRXVXPXQEATFAYSFIPNEXXAGXPFGLXVQLNYX 650
S++ASFRYP DY +YIQNFTALP N V P ++ATF YSFIP E G PFGL + LNY
Sbjct: 119 SLDASFRYPQDYQFYIQNFTALPLNTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYK 178
Query: 651 XAXGXAYXXXVYNXTLTL 704
G + V+N T+T+
Sbjct: 179 DLNGNVFQDAVFNQTVTV 196
>AF156965-1|AAD48778.1| 286|Homo sapiens translocon-associated
protein alpha subunit protein.
Length = 286
Score = 130 bits (313), Expect = 8e-30
Identities = 84/198 (42%), Positives = 108/198 (54%), Gaps = 14/198 (7%)
Frame = +3
Query: 153 LXXFTFLIVPAALLCLGSGN-ILAXA----EXXXXXXXXXIEGEDNQV-VGDDA---LVD 305
L L+ PA +L G +LA A E IE ED++ V +D LV+
Sbjct: 7 LLLLLLLVFPATVLFRGGPRGLLAVAQDLTEDEETVEDSIIEDEDDEAEVEEDEPTDLVE 66
Query: 306 DDESV-----VKSSQDIDTTILFTKPVPSLGDLTFDIQAGYPVEFFVGFINKGSVXYVVE 470
D E ++S DTTILF K G+ D A V+F VGF NKG+ ++VE
Sbjct: 67 DKEEEDVSGEPEASPSADTTILFVK-----GE---DFPANNIVKFLVGFTNKGTEDFIVE 118
Query: 471 SMEASFRYPMDYTYYIQNFTALPYNRXVXPXQEATFAYSFIPNEXXAGXPFGLXVQLNYX 650
S++ASFRYP DY +YIQNFTALP N V P ++ATF YSFIP E G PFGL + LNY
Sbjct: 119 SLDASFRYPQDYQFYIQNFTALPLNTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYK 178
Query: 651 XAXGXAYXXXVYNXTLTL 704
G + V+N T+T+
Sbjct: 179 DLNGNVFQDAVFNQTVTV 196
>AK222809-1|BAD96529.1| 286|Homo sapiens signal sequence receptor,
alpha variant protein.
Length = 286
Score = 129 bits (312), Expect = 1e-29
Identities = 69/148 (46%), Positives = 89/148 (60%)
Frame = +3
Query: 261 EGEDNQVVGDDALVDDDESVVKSSQDIDTTILFTKPVPSLGDLTFDIQAGYPVEFFVGFI 440
E E +V +D +D ++S DTTILF K G+ D A V+F VGF
Sbjct: 58 EDEPTDLV-EDKEEEDVSGEPEASPSADTTILFVK-----GE---DFPANNIVKFLVGFT 108
Query: 441 NKGSVXYVVESMEASFRYPMDYTYYIQNFTALPYNRXVXPXQEATFAYSFIPNEXXAGXP 620
NKG+ ++VES++ASFRYP DY +YIQNFTALP N V P ++ATF YSFIP E G P
Sbjct: 109 NKGTEDFIVESLDASFRYPQDYQFYIQNFTALPLNTVVPPQRQATFEYSFIPAEPMGGRP 168
Query: 621 FGLXVQLNYXXAXGXAYXXXVYNXTLTL 704
FGL + LNY G + V+N T+T+
Sbjct: 169 FGLVINLNYKDLNGNVFQDAVFNQTVTV 196
>AK222762-1|BAD96482.1| 286|Homo sapiens signal sequence receptor,
alpha variant protein.
Length = 286
Score = 129 bits (312), Expect = 1e-29
Identities = 69/148 (46%), Positives = 89/148 (60%)
Frame = +3
Query: 261 EGEDNQVVGDDALVDDDESVVKSSQDIDTTILFTKPVPSLGDLTFDIQAGYPVEFFVGFI 440
E E +V +D +D ++S DTTILF K G+ D A V+F VGF
Sbjct: 58 EDEPTDLV-EDKEEEDVSGEPEASPSADTTILFVK-----GE---DFPANNIVKFLVGFT 108
Query: 441 NKGSVXYVVESMEASFRYPMDYTYYIQNFTALPYNRXVXPXQEATFAYSFIPNEXXAGXP 620
NKG+ ++VES++ASFRYP DY +YIQNFTALP N V P ++ATF YSFIP E G P
Sbjct: 109 NKGTEDFIVESLDASFRYPQDYQFYIQNFTALPLNTVVPPQRQATFEYSFIPAEPMGGRP 168
Query: 621 FGLXVQLNYXXAXGXAYXXXVYNXTLTL 704
FGL + LNY G + V+N T+T+
Sbjct: 169 FGLVINLNYKDLNGNVFQDAVFNQTVTV 196
>AL139095-1|CAI16444.1| 286|Homo sapiens signal sequence receptor,
alpha (translocon-associated protein alpha) protein.
Length = 286
Score = 129 bits (311), Expect = 1e-29
Identities = 82/198 (41%), Positives = 107/198 (54%), Gaps = 14/198 (7%)
Frame = +3
Query: 153 LXXFTFLIVPAALLCLGSGN-ILAXA----EXXXXXXXXXIEGEDNQVVGD-----DALV 302
L L+ PA +L G +LA A E IE ED++ + D +
Sbjct: 7 LLLLLLLVFPATVLFRGGPRGLLAVAQDLTEDEETVEDSIIEDEDDEAEVEEDEPTDLVK 66
Query: 303 DDDESVV----KSSQDIDTTILFTKPVPSLGDLTFDIQAGYPVEFFVGFINKGSVXYVVE 470
D +E V ++S DTTILF K G+ D A V+F VGF NKG+ ++VE
Sbjct: 67 DKEEEDVSGEPEASPSADTTILFVK-----GE---DFPANNIVKFLVGFTNKGTEDFIVE 118
Query: 471 SMEASFRYPMDYTYYIQNFTALPYNRXVXPXQEATFAYSFIPNEXXAGXPFGLXVQLNYX 650
S++ASFRYP DY +YIQNFTALP N V P ++ATF YSFIP E G PFGL + LNY
Sbjct: 119 SLDASFRYPQDYQFYIQNFTALPLNTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYK 178
Query: 651 XAXGXAYXXXVYNXTLTL 704
G + V+N T+T+
Sbjct: 179 DLNGNVFQDAVFNQTVTV 196
>AK075562-1|BAC11701.1| 259|Homo sapiens protein ( Homo sapiens
cDNA PSEC0262 fis, clone NT2RP3004505, highly similar to
TRANSLOCON-ASSOCIATED PROTEIN, ALPHA SUBUNIT PRECURSOR.
).
Length = 259
Score = 128 bits (309), Expect = 3e-29
Identities = 65/137 (47%), Positives = 85/137 (62%), Gaps = 1/137 (0%)
Frame = +3
Query: 297 LVDDDESVVKSS-QDIDTTILFTKPVPSLGDLTFDIQAGYPVEFFVGFINKGSVXYVVES 473
L +D+E+V S +D D + P+ DL D A V+F VGF NKG+ ++VES
Sbjct: 35 LTEDEETVEDSIIEDEDDEAEVEEDEPT--DLVEDFPANNIVKFLVGFTNKGTEDFIVES 92
Query: 474 MEASFRYPMDYTYYIQNFTALPYNRXVXPXQEATFAYSFIPNEXXAGXPFGLXVQLNYXX 653
++ASFRYP DY +YIQNFTALP N V P ++ATF YSFIP E G PFGL + LNY
Sbjct: 93 LDASFRYPQDYQFYIQNFTALPLNTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKD 152
Query: 654 AXGXAYXXXVYNXTLTL 704
G + V+N T+T+
Sbjct: 153 LNGNVFQDAVFNQTVTV 169
>Z12830-1|CAA78290.1| 286|Homo sapiens SSR alpha subunit protein.
Length = 286
Score = 127 bits (307), Expect = 4e-29
Identities = 68/148 (45%), Positives = 89/148 (60%)
Frame = +3
Query: 261 EGEDNQVVGDDALVDDDESVVKSSQDIDTTILFTKPVPSLGDLTFDIQAGYPVEFFVGFI 440
E E +V +D +D ++S DTTILF K G+ D A V+F VGF
Sbjct: 58 EDEPTDLV-EDKEEEDVSGEPEASPSADTTILFVK-----GE---DFPANNIVKFLVGFT 108
Query: 441 NKGSVXYVVESMEASFRYPMDYTYYIQNFTALPYNRXVXPXQEATFAYSFIPNEXXAGXP 620
NKG+ ++VES++ASFRYP D+ +YIQNFTALP N V P ++ATF YSFIP E G P
Sbjct: 109 NKGTEDFIVESLDASFRYPQDHQFYIQNFTALPLNTVVPPQRQATFEYSFIPAEPMGGRP 168
Query: 621 FGLXVQLNYXXAXGXAYXXXVYNXTLTL 704
FGL + LNY G + V+N T+T+
Sbjct: 169 FGLVINLNYKDLNGNVFQDAVFNQTVTV 196
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,971,885
Number of Sequences: 237096
Number of extensions: 1335165
Number of successful extensions: 1653
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1624
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1648
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10761200974
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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