Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP08_F_K02
         (848 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024852-1|AAK66027.1|  257|Caenorhabditis elegans Hypothetical ...   107   7e-24
U00050-2|AAL02479.1|  582|Caenorhabditis elegans Hypothetical pr...    29   5.5  
U00050-1|AAA50697.1|  583|Caenorhabditis elegans Hypothetical pr...    29   5.5  

>AC024852-1|AAK66027.1|  257|Caenorhabditis elegans Hypothetical
           protein Y71F9AM.6 protein.
          Length = 257

 Score =  107 bits (258), Expect = 7e-24
 Identities = 51/134 (38%), Positives = 76/134 (56%)
 Frame = +3

Query: 303 DDDESVVKSSQDIDTTILFTKPVPSLGDLTFDIQAGYPVEFFVGFINKGSVXYVVESMEA 482
           +DD+  + +S D      F +P  S  ++  +   G PV++ +GF NKG   +VV+  E 
Sbjct: 37  EDDDLTIGASPDAGLAFHFVQP--SDANVVREFYTGKPVKYLIGFQNKGEKDFVVKYAET 94

Query: 483 SFRYPMDYTYYIQNFTALPYNRXVXPXQEATFAYSFIPNEXXAGXPFGLXVQLNYXXAXG 662
           SFR+P D++Y++QNFT   YNR V P +E T  Y F  +E  AG P GL V ++Y  A G
Sbjct: 95  SFRFPTDHSYHLQNFTRGEYNRRVAPKEEVTLDYGFYAHETFAGRPVGLVVNVHYQDADG 154

Query: 663 XAYXXXVYNXTLTL 704
             +   VYN T+ +
Sbjct: 155 NVFVNNVYNQTINI 168


>U00050-2|AAL02479.1|  582|Caenorhabditis elegans Hypothetical
           protein F09F7.5b protein.
          Length = 582

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = +3

Query: 264 GEDNQVVGDDALVDDDESVVKSSQDIDTTILFTKPVPS 377
           GE+ QVVGD  + D+ E  V++++D         P PS
Sbjct: 523 GEEFQVVGDTKINDEQEDRVEATKDKINDAFIMLPPPS 560


>U00050-1|AAA50697.1|  583|Caenorhabditis elegans Hypothetical
           protein F09F7.5a protein.
          Length = 583

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = +3

Query: 264 GEDNQVVGDDALVDDDESVVKSSQDIDTTILFTKPVPS 377
           GE+ QVVGD  + D+ E  V++++D         P PS
Sbjct: 524 GEEFQVVGDTKINDEQEDRVEATKDKINDAFIMLPPPS 561


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,186,907
Number of Sequences: 27780
Number of extensions: 200871
Number of successful extensions: 426
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 422
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 426
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2108493618
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)