Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP08_F_K01
         (877 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061320-1|AAL28868.1|   65|Drosophila melanogaster LD23674p pro...    38   0.014
AE014298-1341|AAF46503.2|   65|Drosophila melanogaster CG2998-PA...    38   0.014
AE014297-4512|AAF56992.1|   64|Drosophila melanogaster CG15527-P...    35   0.17 

>AY061320-1|AAL28868.1|   65|Drosophila melanogaster LD23674p
           protein.
          Length = 65

 Score = 38.3 bits (85), Expect = 0.014
 Identities = 18/31 (58%), Positives = 19/31 (61%)
 Frame = +2

Query: 191 CTXVXVXFXGXXXRXIXRNVXGPVRDGXXLT 283
           CT V V F G   R I RNV GPVR+G  LT
Sbjct: 23  CTQVKVEFLGEQNRQIIRNVKGPVREGDILT 53



 Score = 31.9 bits (69), Expect = 1.2
 Identities = 15/21 (71%), Positives = 16/21 (76%)
 Frame = +1

Query: 124 MXXPXVLARVVKVLGRTGSXG 186
           M  P V ARV+KVLGRTGS G
Sbjct: 1   MDKPVVWARVMKVLGRTGSQG 21


>AE014298-1341|AAF46503.2|   65|Drosophila melanogaster CG2998-PA
           protein.
          Length = 65

 Score = 38.3 bits (85), Expect = 0.014
 Identities = 18/31 (58%), Positives = 19/31 (61%)
 Frame = +2

Query: 191 CTXVXVXFXGXXXRXIXRNVXGPVRDGXXLT 283
           CT V V F G   R I RNV GPVR+G  LT
Sbjct: 23  CTQVKVEFLGEQNRQIIRNVKGPVREGDILT 53



 Score = 31.9 bits (69), Expect = 1.2
 Identities = 15/21 (71%), Positives = 16/21 (76%)
 Frame = +1

Query: 124 MXXPXVLARVVKVLGRTGSXG 186
           M  P V ARV+KVLGRTGS G
Sbjct: 1   MDKPVVWARVMKVLGRTGSQG 21


>AE014297-4512|AAF56992.1|   64|Drosophila melanogaster CG15527-PA
           protein.
          Length = 64

 Score = 34.7 bits (76), Expect = 0.17
 Identities = 17/31 (54%), Positives = 18/31 (58%)
 Frame = +2

Query: 191 CTXVXVXFXGXXXRXIXRNVXGPVRDGXXLT 283
           CT V V F G   R I RNV GPVR G  L+
Sbjct: 22  CTQVRVEFLGDQSRQIIRNVKGPVRVGDILS 52


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,459,870
Number of Sequences: 53049
Number of extensions: 135318
Number of successful extensions: 129
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 122
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 129
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4250176164
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)