Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP08_F_J15
         (858 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0224 + 21447875-21448944,21449465-21449624                       30   2.1  
05_06_0086 - 25447063-25447182,25448082-25448702                       29   3.6  
01_05_0084 - 17991783-17992583                                         29   3.6  
11_01_0800 - 7047425-7048253,7048340-7048927,7049050-7049268,704...    29   6.3  
09_04_0003 - 13577369-13578082,13579045-13579092                       29   6.3  
01_06_1631 - 38760452-38760466,38760696-38760788,38760838-38761539     28   8.3  

>11_06_0224 + 21447875-21448944,21449465-21449624
          Length = 409

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 18/58 (31%), Positives = 32/58 (55%)
 Frame = -1

Query: 225 VRMLLYSLSSRSWLEGLMLSADSSTTPALAASTHIANTTRSFILLGAFSXRVSRLQXK 52
           +R +L +L   +  + LML     T+PA+AA+  + N T  FI + A S  + R++ +
Sbjct: 133 LRFVLLALGGVTGFQALMLQGMKRTSPAIAAA--MPNLTPGFIFVVAASLGLERVRLR 188


>05_06_0086 - 25447063-25447182,25448082-25448702
          Length = 246

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 16/42 (38%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
 Frame = -3

Query: 676 PGRDTGHRRRNERW-LSLRHRGCRGFDVWAGSSEAVLAGDAA 554
           P R    R    RW LS+ H G    D W GS  A    +AA
Sbjct: 52  PARARRRRTTAARWRLSVAHPGAEAADAWGGSGVAGPCAEAA 93


>01_05_0084 - 17991783-17992583
          Length = 266

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 13/55 (23%), Positives = 29/55 (52%)
 Frame = +2

Query: 350 YKLWVGNGQDIVKKYFPLSFRTHHGRKLRQAHLQKLQPRL*SSVPQPIPRMRELP 514
           Y+L V +G+ + K+Y  +  R H  R+  ++ L  L+    +++P+ +     +P
Sbjct: 173 YELTVEDGRRLAKQYSQVLMRRHRARQTAESSLLSLKKEAIAALPEKLRAAAMIP 227


>11_01_0800 -
           7047425-7048253,7048340-7048927,7049050-7049268,
           7049398-7049518,7050593-7050983
          Length = 715

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 19/69 (27%), Positives = 27/69 (39%), Gaps = 3/69 (4%)
 Frame = +3

Query: 204 NCTTASSPVTTTVLYVRAWNTRAKARAASFKM*LTI*SLTRDGTPWSTATSCGSATD--- 374
           +C TAS      +L+        K R    +    I  + R    W+   SCG+  D   
Sbjct: 579 DCATASDTTQIKLLFGAKGAVHIKGRCIGGERRFAIYRMERGVDKWTVKCSCGATDDDGE 638

Query: 375 RILSKSTSH 401
           R+LS  T H
Sbjct: 639 RMLSCDTCH 647


>09_04_0003 - 13577369-13578082,13579045-13579092
          Length = 253

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 24/86 (27%), Positives = 36/86 (41%), Gaps = 2/86 (2%)
 Frame = +3

Query: 240 VLYVRAWNTRAKARAASFKM*LTI*SLTRDGTPWSTATSC-GSATDRILSKSTSH*ALEL 416
           +LYVR WN    A +A+F +      L+      S A  C G A       S +    + 
Sbjct: 64  MLYVRQWNNLQYASSAAFLLTAYSHYLSSSSASASAALRCPGGAAAAAEMVSLARSQADY 123

Query: 417 IMAGNYVKLIYR-NYNLXSEARFHNQ 491
           I+  N ++L Y   Y     AR H++
Sbjct: 124 ILGRNPLRLSYMVGYGRRYPARVHHR 149


>01_06_1631 - 38760452-38760466,38760696-38760788,38760838-38761539
          Length = 269

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = -3

Query: 616 GCRGFDVWAGSSEAVLAGDAAIY 548
           GCR  DV+  ++EA+  GDA +Y
Sbjct: 245 GCRLDDVFGNATEAISTGDANVY 267


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,038,312
Number of Sequences: 37544
Number of extensions: 396862
Number of successful extensions: 1262
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1204
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1262
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2397465936
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)