Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP08_F_J15
         (858 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.            25   2.9  
AB107248-1|BAE72063.1|  278|Anopheles gambiae Bcl-2 family prote...    25   2.9  
EF014219-1|ABJ91581.1|  647|Anopheles gambiae cation proton anti...    24   5.1  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    24   6.8  

>EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.
          Length = 213

 Score = 25.0 bits (52), Expect = 2.9
 Identities = 9/30 (30%), Positives = 18/30 (60%)
 Frame = -3

Query: 604 FDVWAGSSEAVLAGDAAIYFRGSGASAVIY 515
           F++W  + +      A +Y+RG+ A+ V+Y
Sbjct: 75  FEIWDTAGQERYHSLAPMYYRGAQAAIVVY 104


>AB107248-1|BAE72063.1|  278|Anopheles gambiae Bcl-2 family protein
           Anob-1 protein.
          Length = 278

 Score = 25.0 bits (52), Expect = 2.9
 Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
 Frame = +2

Query: 299 VVNNLIIDKRRNTMEYCYKLWVG-NGQDIVKKYFPLSFRTHHGRKLRQAHLQKLQPRL*S 475
           ++N  I+ + RN+ME+C     G  G  +V++  P+      G +L + H     PRL S
Sbjct: 85  LLNRKILQRLRNSMEHCMAGSGGLGGGAVVREALPI--LNGMGEELERMH-----PRLYS 137

Query: 476 SVPQPI 493
           +V + I
Sbjct: 138 NVSRQI 143


>EF014219-1|ABJ91581.1|  647|Anopheles gambiae cation proton
           antiporter protein.
          Length = 647

 Score = 24.2 bits (50), Expect = 5.1
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = -3

Query: 589 GSSEAVLAGDAAIYFRGSGASAVIYRQFSHSRDW 488
           G     + G   I+F G+G   V++  F+ S  W
Sbjct: 403 GGGLLAVFGSEEIHFEGAGPLGVVFAAFTASYFW 436


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 23.8 bits (49), Expect = 6.8
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -1

Query: 168 SADSSTTPALAASTHIANTTRS 103
           +AD S++PA ++ TH   T RS
Sbjct: 236 TADPSSSPAYSSITHYEPTARS 257


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 714,050
Number of Sequences: 2352
Number of extensions: 13412
Number of successful extensions: 31
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 91372671
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)