Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP08_F_J15
         (858 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-808|AAF50957.4| 1286|Drosophila melanogaster CG3047-PA ...    31   1.5  
AE014297-3800|AAN14054.2|  881|Drosophila melanogaster CG31439-P...    30   3.5  
BT001820-1|AAN71575.1|  372|Drosophila melanogaster RH41633p pro...    29   6.2  
AE014296-1708|AAF50224.3|  388|Drosophila melanogaster CG6767-PB...    29   6.2  

>AE014134-808|AAF50957.4| 1286|Drosophila melanogaster CG3047-PA
           protein.
          Length = 1286

 Score = 31.5 bits (68), Expect = 1.5
 Identities = 26/94 (27%), Positives = 32/94 (34%)
 Frame = +3

Query: 117 SQCACSPPAPASWNYPRTA*ALLTKTSRTNCTTASSPVTTTVLYVRAWNTRAKARAASFK 296
           S CA +   P     P T+    T    T  T+ S P TTT        TR         
Sbjct: 359 STCAPTTTTPRPTTTPSTSRPTTTTPRSTTTTSTSRPTTTTPRSTTTTTTRRPTTTTPRS 418

Query: 297 M*LTI*SLTRDGTPWSTATSCGSATDRILSKSTS 398
              T  S     TP ST T+  S       +ST+
Sbjct: 419 TTTTSTSRPTTTTPRSTTTTTTSRPTTTTPRSTT 452



 Score = 29.9 bits (64), Expect = 4.7
 Identities = 25/85 (29%), Positives = 28/85 (32%)
 Frame = +3

Query: 117  SQCACSPPAPASWNYPRTA*ALLTKTSRTNCTTASSPVTTTVLYVRAWNTRAKARAASFK 296
            S CA +   P S     T+    T    T  TT S P TTT        T          
Sbjct: 1079 STCAPTTTTPRSTTTTTTSRPTTTTPRSTTTTTTSRPTTTTPRSTTTPCTSRPTTTTPRS 1138

Query: 297  M*LTI*SLTRDGTPWSTATSCGSAT 371
               T  S     TP ST T C + T
Sbjct: 1139 TTTTTTSRPTTTTPRSTTTPCPTTT 1163


>AE014297-3800|AAN14054.2|  881|Drosophila melanogaster CG31439-PA
           protein.
          Length = 881

 Score = 30.3 bits (65), Expect = 3.5
 Identities = 20/90 (22%), Positives = 31/90 (34%)
 Frame = +3

Query: 129 CSPPAPASWNYPRTA*ALLTKTSRTNCTTASSPVTTTVLYVRAWNTRAKARAASFKM*LT 308
           C+P    +     T     T T+ T  TT  +P TTT        T       +      
Sbjct: 599 CTPTTTTTTTTTTTTTTTTTTTTTTTTTTTCTPTTTTTTTTTTTTTTTTTTTTTTTTCTP 658

Query: 309 I*SLTRDGTPWSTATSCGSATDRILSKSTS 398
             + T   T  +T T+C   T    + +T+
Sbjct: 659 TTTTTTTTTTTTTTTTCTPTTTTTTTTTTT 688


>BT001820-1|AAN71575.1|  372|Drosophila melanogaster RH41633p
           protein.
          Length = 372

 Score = 29.5 bits (63), Expect = 6.2
 Identities = 17/75 (22%), Positives = 38/75 (50%)
 Frame = +2

Query: 92  NKMKLLVVFAMCVLAASAGVVELSADSMSPSNQDLEDKLYNSILTGDYDSAVRKSLEYES 271
           N M+LL++   C +A+++ V  +       + QD +DKL  S    +     +K+ +++ 
Sbjct: 97  NLMELLIMINACKIASASRVTAV-IPCFPYARQDKKDKLAGSEDNAESKKLAKKNYDWKF 155

Query: 272 QGQGSIVQNVVNNLI 316
           + +  I   +V N++
Sbjct: 156 RSRAPISAKLVANML 170


>AE014296-1708|AAF50224.3|  388|Drosophila melanogaster CG6767-PB,
           isoform B protein.
          Length = 388

 Score = 29.5 bits (63), Expect = 6.2
 Identities = 17/75 (22%), Positives = 38/75 (50%)
 Frame = +2

Query: 92  NKMKLLVVFAMCVLAASAGVVELSADSMSPSNQDLEDKLYNSILTGDYDSAVRKSLEYES 271
           N M+LL++   C +A+++ V  +       + QD +DKL  S    +     +K+ +++ 
Sbjct: 113 NLMELLIMINACKIASASRVTAV-IPCFPYARQDKKDKLAGSEDNAESKKLAKKNYDWKF 171

Query: 272 QGQGSIVQNVVNNLI 316
           + +  I   +V N++
Sbjct: 172 RSRAPISAKLVANML 186


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,297,271
Number of Sequences: 53049
Number of extensions: 633986
Number of successful extensions: 2272
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2065
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2246
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4126982652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)