Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP08_F_J14
(861 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82274-1|CAB05226.1| 165|Caenorhabditis elegans Hypothetical pr... 219 2e-57
Z82274-14|CAJ76933.1| 50|Caenorhabditis elegans Hypothetical p... 47 2e-05
U66260-1|AAB07021.1| 1540|Caenorhabditis elegans multidrug resis... 28 7.4
U41554-8|ABA03118.1| 1534|Caenorhabditis elegans Multidrug resis... 28 7.4
U41554-7|AAM69107.1| 1534|Caenorhabditis elegans Multidrug resis... 28 7.4
U41554-6|AAL06032.1| 1534|Caenorhabditis elegans Multidrug resis... 28 7.4
U41554-5|AAD31550.2| 1528|Caenorhabditis elegans Multidrug resis... 28 7.4
AB199793-1|BAD88409.1| 1534|Caenorhabditis elegans multidrug res... 28 7.4
AC024785-5|AAF60596.1| 577|Caenorhabditis elegans C-type lectin... 28 9.8
>Z82274-1|CAB05226.1| 165|Caenorhabditis elegans Hypothetical
protein JC8.3a protein.
Length = 165
Score = 219 bits (536), Expect = 2e-57
Identities = 100/134 (74%), Positives = 121/134 (90%)
Frame = +3
Query: 183 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITV 362
MPPKFDP EIKIV LRCVGGEVGATS+LAPK+GPLGLSPKK+G+DIAKAT DWKGLK+T
Sbjct: 1 MPPKFDPTEIKIVYLRCVGGEVGATSALAPKVGPLGLSPKKIGEDIAKATQDWKGLKVTC 60
Query: 363 QLTVQNRXAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLEDVIGIAKIMRNRS 542
+LT+QNR A+I VVPSAA+LI++ LKEPPRDRKK KN+KHNG+++++ +I IA+IMR RS
Sbjct: 61 KLTIQNRVAKIDVVPSAASLIVKELKEPPRDRKKVKNVKHNGDLTVDTIIKIARIMRPRS 120
Query: 543 MARYLSGSVKEILG 584
MA+ L G+VKEILG
Sbjct: 121 MAKKLEGTVKEILG 134
Score = 47.2 bits (107), Expect = 2e-05
Identities = 19/33 (57%), Positives = 25/33 (75%)
Frame = +1
Query: 571 KRFLGTAQSVGCTVEGXPPHDLIDDINSGALTI 669
K LGTAQSVGCT++G PHD+I+ I +G + I
Sbjct: 130 KEILGTAQSVGCTIDGQHPHDIIESIANGEIEI 162
>Z82274-14|CAJ76933.1| 50|Caenorhabditis elegans Hypothetical
protein JC8.3c protein.
Length = 50
Score = 47.2 bits (107), Expect = 2e-05
Identities = 19/33 (57%), Positives = 25/33 (75%)
Frame = +1
Query: 571 KRFLGTAQSVGCTVEGXPPHDLIDDINSGALTI 669
K LGTAQSVGCT++G PHD+I+ I +G + I
Sbjct: 15 KEILGTAQSVGCTIDGQHPHDIIESIANGEIEI 47
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +3
Query: 528 MRNRSMARYLSGSVKEILG 584
MR RSMA+ L G+VKEILG
Sbjct: 1 MRPRSMAKKLEGTVKEILG 19
>U66260-1|AAB07021.1| 1540|Caenorhabditis elegans multidrug
resistance related protein1 protein.
Length = 1540
Score = 28.3 bits (60), Expect = 7.4
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = -2
Query: 464 LFTITRRLLKGSDDKGCCRG--NNSYLGXSVLNCQLHSDLETLP 339
+F + R L+ GSD + G NNS + V NC H+D T+P
Sbjct: 1 MFPLVRELVCGSDYELLETGWRNNSNI-PQVTNCGQHTDFSTIP 43
>U41554-8|ABA03118.1| 1534|Caenorhabditis elegans Multidrug
resistance protein familyprotein 1, isoform e protein.
Length = 1534
Score = 28.3 bits (60), Expect = 7.4
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = -2
Query: 464 LFTITRRLLKGSDDKGCCRG--NNSYLGXSVLNCQLHSDLETLP 339
+F + R L+ GSD + G NNS + V NC H+D T+P
Sbjct: 1 MFPLVRELVCGSDYELLETGWRNNSNI-PQVTNCGQHTDFSTIP 43
>U41554-7|AAM69107.1| 1534|Caenorhabditis elegans Multidrug
resistance protein familyprotein 1, isoform c protein.
Length = 1534
Score = 28.3 bits (60), Expect = 7.4
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = -2
Query: 464 LFTITRRLLKGSDDKGCCRG--NNSYLGXSVLNCQLHSDLETLP 339
+F + R L+ GSD + G NNS + V NC H+D T+P
Sbjct: 1 MFPLVRELVCGSDYELLETGWRNNSNI-PQVTNCGQHTDFSTIP 43
>U41554-6|AAL06032.1| 1534|Caenorhabditis elegans Multidrug
resistance protein familyprotein 1, isoform b protein.
Length = 1534
Score = 28.3 bits (60), Expect = 7.4
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = -2
Query: 464 LFTITRRLLKGSDDKGCCRG--NNSYLGXSVLNCQLHSDLETLP 339
+F + R L+ GSD + G NNS + V NC H+D T+P
Sbjct: 1 MFPLVRELVCGSDYELLETGWRNNSNI-PQVTNCGQHTDFSTIP 43
>U41554-5|AAD31550.2| 1528|Caenorhabditis elegans Multidrug
resistance protein familyprotein 1, isoform a protein.
Length = 1528
Score = 28.3 bits (60), Expect = 7.4
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = -2
Query: 464 LFTITRRLLKGSDDKGCCRG--NNSYLGXSVLNCQLHSDLETLP 339
+F + R L+ GSD + G NNS + V NC H+D T+P
Sbjct: 1 MFPLVRELVCGSDYELLETGWRNNSNI-PQVTNCGQHTDFSTIP 43
>AB199793-1|BAD88409.1| 1534|Caenorhabditis elegans multidrug
resistance-associatedprotein protein.
Length = 1534
Score = 28.3 bits (60), Expect = 7.4
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = -2
Query: 464 LFTITRRLLKGSDDKGCCRG--NNSYLGXSVLNCQLHSDLETLP 339
+F + R L+ GSD + G NNS + V NC H+D T+P
Sbjct: 1 MFPLVRELVCGSDYELLETGWRNNSNI-PQVTNCGQHTDFSTIP 43
>AC024785-5|AAF60596.1| 577|Caenorhabditis elegans C-type lectin
protein 73 protein.
Length = 577
Score = 27.9 bits (59), Expect = 9.8
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -2
Query: 356 DLETLPVTCGLGNVITHLFRRQTKRTDFR 270
D ++LP+ C LG V+ + ++ TDFR
Sbjct: 386 DSQSLPIWCKLGKVVKYKYKVTPGWTDFR 414
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,808,620
Number of Sequences: 27780
Number of extensions: 294558
Number of successful extensions: 716
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 700
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 716
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2150453690
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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