Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP08_F_J05
(886 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC084158-4|AAK68562.1| 299|Caenorhabditis elegans Hypothetical ... 235 2e-62
AC084158-3|AAL00872.1| 313|Caenorhabditis elegans Hypothetical ... 231 5e-61
AC084158-5|AAO21417.1| 200|Caenorhabditis elegans Hypothetical ... 165 4e-41
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 31 1.4
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 31 1.4
AF043700-6|AAB97569.2| 443|Caenorhabditis elegans Hypothetical ... 30 1.9
AL132902-6|CAC14421.1| 316|Caenorhabditis elegans Hypothetical ... 29 4.4
Z82089-1|CAB05002.1| 983|Caenorhabditis elegans Hypothetical pr... 29 5.8
Z81511-2|CAB04167.1| 983|Caenorhabditis elegans Hypothetical pr... 29 5.8
Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical pr... 29 5.8
Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical pr... 29 5.8
AL021180-1|CAA15980.1| 383|Caenorhabditis elegans Hypothetical ... 29 5.8
AF303252-1|AAG50210.1| 383|Caenorhabditis elegans 3E324 protein. 29 5.8
Z75533-1|CAA99815.1| 423|Caenorhabditis elegans Hypothetical pr... 28 7.7
>AC084158-4|AAK68562.1| 299|Caenorhabditis elegans Hypothetical
protein Y69A2AR.18a protein.
Length = 299
Score = 235 bits (576), Expect = 2e-62
Identities = 125/242 (51%), Positives = 160/242 (66%), Gaps = 4/242 (1%)
Frame = +3
Query: 168 RNXAXLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFYER--- 338
R A LK ISIRLKSVKNIQKIT+SMKMV+AAKY +AER+LK AR YG GA F++
Sbjct: 23 RGFATLKDISIRLKSVKNIQKITKSMKMVAAAKYAKAERELKGARAYGVGAKTFFDNIDP 82
Query: 339 -AEVTPPEDDPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAENIKVICVGDKSRGI 515
E ++ KQ+ V +TSDRGLCG VH+ + K +N L+ G + I+V+ +GDKSR
Sbjct: 83 VVEGVEKQESKKQVLVLITSDRGLCGGVHSSIVKEAKNILNNAGDKEIRVVAIGDKSRAG 142
Query: 516 LQRLYGKHIISVANEIGRLPPTFLDASQLATAILTSGYEFGSGKIIYNKFKSVVSYAQSD 695
LQRLY I+ NEIGR PP+F DAS A AIL SGY+F +G I++N+FK+VVSY S
Sbjct: 143 LQRLYANSILLSGNEIGRAPPSFADASIAAKAILDSGYDFETGTILFNRFKTVVSYETSK 202
Query: 696 LPLYTKKSIESASKLTAYDSLDSDVLQSYTEFSLASXXXXXXXXXXXXXXXRXRMTAMDN 875
L + ++I++ L+ YDS+D DVLQSY+E+SLA RMTAMD
Sbjct: 203 LQILPLEAIKAKEALSTYDSVDDDVLQSYSEYSLAQ-LIYYGMKESATSEQSSRMTAMDG 261
Query: 876 AS 881
AS
Sbjct: 262 AS 263
>AC084158-3|AAL00872.1| 313|Caenorhabditis elegans Hypothetical
protein Y69A2AR.18b protein.
Length = 313
Score = 231 bits (565), Expect = 5e-61
Identities = 117/215 (54%), Positives = 152/215 (70%), Gaps = 4/215 (1%)
Frame = +3
Query: 168 RNXAXLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFYER--- 338
R A LK ISIRLKSVKNIQKIT+SMKMV+AAKY +AER+LK AR YG GA F++
Sbjct: 23 RGFATLKDISIRLKSVKNIQKITKSMKMVAAAKYAKAERELKGARAYGVGAKTFFDNIDP 82
Query: 339 -AEVTPPEDDPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAENIKVICVGDKSRGI 515
E ++ KQ+ V +TSDRGLCG VH+ + K +N L+ G + I+V+ +GDKSR
Sbjct: 83 VVEGVEKQESKKQVLVLITSDRGLCGGVHSSIVKEAKNILNNAGDKEIRVVAIGDKSRAG 142
Query: 516 LQRLYGKHIISVANEIGRLPPTFLDASQLATAILTSGYEFGSGKIIYNKFKSVVSYAQSD 695
LQRLY I+ NEIGR PP+F DAS A AIL SGY+F +G I++N+FK+VVSY S
Sbjct: 143 LQRLYANSILLSGNEIGRAPPSFADASIAAKAILDSGYDFETGTILFNRFKTVVSYETSK 202
Query: 696 LPLYTKKSIESASKLTAYDSLDSDVLQSYTEFSLA 800
L + ++I++ L+ YDS+D DVLQSY+E+SLA
Sbjct: 203 LQILPLEAIKAKEALSTYDSVDDDVLQSYSEYSLA 237
>AC084158-5|AAO21417.1| 200|Caenorhabditis elegans Hypothetical
protein Y69A2AR.18c protein.
Length = 200
Score = 165 bits (401), Expect = 4e-41
Identities = 86/154 (55%), Positives = 106/154 (68%), Gaps = 4/154 (2%)
Frame = +3
Query: 168 RNXAXLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERDLKAARPYGEGAVQFYER--- 338
R A LK ISIRLKSVKNIQKIT+SMKMV+AAKY +AER+LK AR YG GA F++
Sbjct: 23 RGFATLKDISIRLKSVKNIQKITKSMKMVAAAKYAKAERELKGARAYGVGAKTFFDNIDP 82
Query: 339 -AEVTPPEDDPKQLFVAMTSDRGLCGAVHTGVSKVIRNRLSEPGAENIKVICVGDKSRGI 515
E ++ KQ+ V +TSDRGLCG VH+ + K +N L+ G + I+V+ +GDKSR
Sbjct: 83 VVEGVEKQESKKQVLVLITSDRGLCGGVHSSIVKEAKNILNNAGDKEIRVVAIGDKSRAG 142
Query: 516 LQRLYGKHIISVANEIGRLPPTFLDASQLATAIL 617
LQRLY I+ NEIGR PP+F DAS A AIL
Sbjct: 143 LQRLYANSILLSGNEIGRAPPSFADASIAAKAIL 176
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 30.7 bits (66), Expect = 1.4
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Frame = -3
Query: 575 WETSDLI-SNTNDVLSVQSLQDTARFISHTDHLDVLSTRFAETVADHFGYTSVY-SSAQT 402
W+T I T + V++ + + L +E + D+FG+T V+ +SA T
Sbjct: 71 WDTQQQIWEKTFGSMDVEASTSRIALTDNNYLIPALPDVSSEILFDYFGFTEVHKTSAST 130
Query: 401 SVRGHSNK 378
V HSNK
Sbjct: 131 LVAKHSNK 138
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 30.7 bits (66), Expect = 1.4
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Frame = -3
Query: 575 WETSDLI-SNTNDVLSVQSLQDTARFISHTDHLDVLSTRFAETVADHFGYTSVY-SSAQT 402
W+T I T + V++ + + L +E + D+FG+T V+ +SA T
Sbjct: 71 WDTQQQIWEKTFGSMDVEASTSRIALTDNNYLIPALPDVSSEILFDYFGFTEVHKTSAST 130
Query: 401 SVRGHSNK 378
V HSNK
Sbjct: 131 LVAKHSNK 138
>AF043700-6|AAB97569.2| 443|Caenorhabditis elegans Hypothetical
protein K09H9.2 protein.
Length = 443
Score = 30.3 bits (65), Expect = 1.9
Identities = 15/53 (28%), Positives = 24/53 (45%)
Frame = +3
Query: 288 LKAARPYGEGAVQFYERAEVTPPEDDPKQLFVAMTSDRGLCGAVHTGVSKVIR 446
L RP+ + + + E +P DP F+ ++ D + GA G S IR
Sbjct: 63 LSKNRPFDQAMNKTMTKMEFSPDYSDPSSEFMLLSVDESVIGAFSEGQSLTIR 115
>AL132902-6|CAC14421.1| 316|Caenorhabditis elegans Hypothetical
protein Y71A12B.6 protein.
Length = 316
Score = 29.1 bits (62), Expect = 4.4
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +1
Query: 643 ERSFTTSSSLWSRTPSPTCP 702
E T S+SLW+ TP P CP
Sbjct: 124 EFDITVSNSLWTFTPVPACP 143
>Z82089-1|CAB05002.1| 983|Caenorhabditis elegans Hypothetical
protein ZK270.1 protein.
Length = 983
Score = 28.7 bits (61), Expect = 5.8
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +3
Query: 615 LTSGYEFGSGKIIYNKFKSVVSYAQSDLPLYTKKSIESASKL-TAYDSLDSDVLQSYT 785
+ GYEFGS +I N+ + ++ + ++ + + SK A + SD LQ YT
Sbjct: 482 IVGGYEFGSDEIDKNRMEINIAENRVNIARHHRPLTRQPSKFHEATQPIISDSLQKYT 539
>Z81511-2|CAB04167.1| 983|Caenorhabditis elegans Hypothetical
protein ZK270.1 protein.
Length = 983
Score = 28.7 bits (61), Expect = 5.8
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +3
Query: 615 LTSGYEFGSGKIIYNKFKSVVSYAQSDLPLYTKKSIESASKL-TAYDSLDSDVLQSYT 785
+ GYEFGS +I N+ + ++ + ++ + + SK A + SD LQ YT
Sbjct: 482 IVGGYEFGSDEIDKNRMEINIAENRVNIARHHRPLTRQPSKFHEATQPIISDSLQKYT 539
>Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical protein
T04F3.1 protein.
Length = 3517
Score = 28.7 bits (61), Expect = 5.8
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = -3
Query: 590 VQESRWETSDLISNTNDVLSVQSLQDTARFISHTDHL-DVLSTRFAETVADHFGY 429
V +S DL +NT+ + S + T + T+ D S R T+ D FGY
Sbjct: 2425 VLKSSISLDDLFNNTSGIEKTTSEKTTTTTTTRTETTTDTYSKRSTSTLVDRFGY 2479
>Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical protein
T04F3.1 protein.
Length = 3517
Score = 28.7 bits (61), Expect = 5.8
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = -3
Query: 590 VQESRWETSDLISNTNDVLSVQSLQDTARFISHTDHL-DVLSTRFAETVADHFGY 429
V +S DL +NT+ + S + T + T+ D S R T+ D FGY
Sbjct: 2425 VLKSSISLDDLFNNTSGIEKTTSEKTTTTTTTRTETTTDTYSKRSTSTLVDRFGY 2479
>AL021180-1|CAA15980.1| 383|Caenorhabditis elegans Hypothetical
protein Y44F5A.1 protein.
Length = 383
Score = 28.7 bits (61), Expect = 5.8
Identities = 19/42 (45%), Positives = 21/42 (50%)
Frame = +3
Query: 486 ICVGDKSRGILQRLYGKHIISVANEIGRLPPTFLDASQLATA 611
+CV D G R K SV I LPPT L + QLATA
Sbjct: 75 LCVFDIDTGKRVRCILKCHRSVPTAICTLPPTALKSQQLATA 116
>AF303252-1|AAG50210.1| 383|Caenorhabditis elegans 3E324 protein.
Length = 383
Score = 28.7 bits (61), Expect = 5.8
Identities = 19/42 (45%), Positives = 21/42 (50%)
Frame = +3
Query: 486 ICVGDKSRGILQRLYGKHIISVANEIGRLPPTFLDASQLATA 611
+CV D G R K SV I LPPT L + QLATA
Sbjct: 75 LCVFDIDTGKRVRCILKCHRSVPTAICTLPPTALKSQQLATA 116
>Z75533-1|CAA99815.1| 423|Caenorhabditis elegans Hypothetical
protein C54G4.2 protein.
Length = 423
Score = 28.3 bits (60), Expect = 7.7
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -3
Query: 608 SGQLTCVQESRWETSDLISNTNDVLSVQSLQDTARFISH 492
S +T ES +TSDLIS+ D + +F+SH
Sbjct: 64 SASITPSTESTMKTSDLISSIGDHTEGEPSNGNTKFVSH 102
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,138,512
Number of Sequences: 27780
Number of extensions: 407326
Number of successful extensions: 1087
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1024
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1084
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2234373834
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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