Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP08_F_J02
         (870 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0687 - 5651002-5651453,5651535-5651951,5652621-5653338,565...    30   2.8  
10_08_0095 + 14760292-14760624,14760689-14761000,14761768-147624...    30   2.8  
11_06_0610 - 25449085-25453284                                         29   3.7  
04_03_0795 - 19704354-19704464,19705152-19705214,19705298-197053...    29   6.4  

>11_01_0687 -
           5651002-5651453,5651535-5651951,5652621-5653338,
           5654106-5654417,5654482-5654814
          Length = 743

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 27/72 (37%), Positives = 29/72 (40%), Gaps = 3/72 (4%)
 Frame = +1

Query: 211 SRRHPRXVTWXKQMGGGKVFGTLGQNDXGLFGKAGYNREIFNDDRGKLTG-QAYGTRVLG 387
           SR H    TW KQ  GGK  G  G    G  G  G  R  +       TG Q YG  V  
Sbjct: 387 SRSHYIVQTWQKQF-GGKGAGGQGGGQPGYEGGTGQQR--YGVGAPPPTGQQGYGGGVPP 443

Query: 388 P--GGDSTNYGG 417
           P   G  T +GG
Sbjct: 444 PTCSGGHTGFGG 455


>10_08_0095 +
           14760292-14760624,14760689-14761000,14761768-14762489,
           14762905-14763187,14763419-14763650,14763736-14764187
          Length = 777

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 27/72 (37%), Positives = 29/72 (40%), Gaps = 3/72 (4%)
 Frame = +1

Query: 211 SRRHPRXVTWXKQMGGGKVFGTLGQNDXGLFGKAGYNREIFNDDRGKLTG-QAYGTRVLG 387
           SR H    TW KQ  GGK  G  G    G  G  G  R  +       TG Q YG  V  
Sbjct: 387 SRSHYIVQTWQKQF-GGKGAGGQGGGQPGYEGGTGQQR--YGVGAPPPTGQQGYGGGVPP 443

Query: 388 P--GGDSTNYGG 417
           P   G  T +GG
Sbjct: 444 PTCSGGHTGFGG 455


>11_06_0610 - 25449085-25453284
          Length = 1399

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 23/44 (52%), Positives = 27/44 (61%)
 Frame = -2

Query: 383  KTLVP*A*PVSLPRSSLKISLL*PAFPKSPXSFCPKVPKTLPPP 252
            K+L P A PVSLP   +K SL  P  P +P S  P V K+LPPP
Sbjct: 1262 KSLPPPA-PVSLPPPPVK-SL--P--PPAPVSLPPPVVKSLPPP 1299


>04_03_0795 -
           19704354-19704464,19705152-19705214,19705298-19705378,
           19705468-19705623,19705711-19705785,19706477-19706587,
           19707206-19707304,19707453-19707546,19707779-19707838,
           19709262-19709334,19711448-19711490,19711533-19711606,
           19711985-19712075,19712170-19712214,19712533-19712589,
           19713440-19713544,19713817-19713932,19714625-19714634,
           19714810-19714920,19715502-19715594,19715664-19715690,
           19715736-19715798,19716326-19716451,19716812-19716949,
           19717164-19717832,19717949-19718123,19718269-19718450
          Length = 1015

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = -3

Query: 526 YPDPTHRSLXLSSQIXHRFVYL 461
           YPDP HR+  LS Q  H +V L
Sbjct: 251 YPDPQHRTTALSLQGGHMYVLL 272


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,577,330
Number of Sequences: 37544
Number of extensions: 218834
Number of successful extensions: 577
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 555
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 576
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2444475072
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)