Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP08_F_I24
         (877 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U23139-15|AAK31488.1|  387|Caenorhabditis elegans Hypothetical p...   182   3e-46
Z73098-4|CAD44145.1|  565|Caenorhabditis elegans Hypothetical pr...    29   5.8  
Z73098-3|CAD44144.1|  501|Caenorhabditis elegans Hypothetical pr...    29   5.8  
Z67880-1|CAA91794.1|  256|Caenorhabditis elegans Hypothetical pr...    29   5.8  

>U23139-15|AAK31488.1|  387|Caenorhabditis elegans Hypothetical
           protein F13H8.7 protein.
          Length = 387

 Score =  182 bits (443), Expect = 3e-46
 Identities = 96/199 (48%), Positives = 123/199 (61%), Gaps = 2/199 (1%)
 Frame = +3

Query: 123 LESIINNNLTGRDLEEFNRIHFGRRNNLEIKLKESSIXXXXXXXXXXXXXXF--PAKDEQ 296
           +E+ +   L G  L+E  RI +GR       L+ SSI              +   A+ EQ
Sbjct: 11  VETALAEKLDGVSLDEVERILYGRPYRA---LEISSIAEKLAQDGDFQLSGYIVDAQKEQ 67

Query: 297 TRPPRIVKVGIVQHSIAVPTDRPVNEQKKAIFNKVKKIIDVAGQEGVNIICFQELWNMPF 476
           TR PR+V+V  +Q+ I  PT   V EQ+ AI  +V  +I+ A   G N+I  QE W MPF
Sbjct: 68  TRAPRLVRVAAIQNKIHRPTTDSVVEQRDAIHQRVGAMIEAAASAGANVIGLQEAWTMPF 127

Query: 477 AFCTREKQPWCEFAESDEDGPTTXFLRELAIKYAMVIVSSILERDEKHSDILWNTAVVXS 656
           AFCTRE+ PW EFAES   GPTT FL +LA+K+ +VI+S ILERDE+  D++WNTAVV S
Sbjct: 128 AFCTRERLPWTEFAESVYTGPTTQFLSKLAVKHDIVIISPILERDEEKDDVIWNTAVVIS 187

Query: 657 DTGNVIGKHRXNHIPRVGD 713
            TG VIG+ R NHIPRVGD
Sbjct: 188 HTGRVIGRSRKNHIPRVGD 206



 Score = 41.5 bits (93), Expect = 8e-04
 Identities = 20/40 (50%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
 Frame = +2

Query: 713 FNESTTTWKVP-GHPVFXTXXXXIAVXICFGRXXVLNWMM 829
           FNEST   +   GHPVF T    I + IC+GR    NWMM
Sbjct: 207 FNESTYYMESTLGHPVFETKYGRIGINICYGRHHPQNWMM 246


>Z73098-4|CAD44145.1|  565|Caenorhabditis elegans Hypothetical
           protein T21C9.3b protein.
          Length = 565

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = +3

Query: 381 KAIFNKVKKIIDVAGQEGVNIICFQELWNMP-FAFCTREKQPWCEF 515
           K +F+  ++  D   +  +NI+ F E   MP   FC   +Q W  F
Sbjct: 46  KDVFDLFEEYFDYPKESDINIV-FNESMTMPNVTFCMSRQQAWSHF 90


>Z73098-3|CAD44144.1|  501|Caenorhabditis elegans Hypothetical
           protein T21C9.3a protein.
          Length = 501

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = +3

Query: 381 KAIFNKVKKIIDVAGQEGVNIICFQELWNMP-FAFCTREKQPWCEF 515
           K +F+  ++  D   +  +NI+ F E   MP   FC   +Q W  F
Sbjct: 46  KDVFDLFEEYFDYPKESDINIV-FNESMTMPNVTFCMSRQQAWSHF 90


>Z67880-1|CAA91794.1|  256|Caenorhabditis elegans Hypothetical
           protein C34E7.3 protein.
          Length = 256

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 16/49 (32%), Positives = 27/49 (55%)
 Frame = -1

Query: 559 SRRKXVVGPSSSDSANSHHGCFSLVQNAKGMFHNSWKQMMLTPSWPATS 413
           SR K     +SS   +  HG + +V+ AK  F + +++  +TPS P T+
Sbjct: 197 SRMKIRKDSNSSKKEDMEHGDWWIVRVAKMGFESCFQRRRITPSPPPTN 245


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,644,406
Number of Sequences: 27780
Number of extensions: 356556
Number of successful extensions: 1034
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1007
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1034
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)