Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP08_F_I18
(890 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0873 - 32372143-32372287,32372678-32372754,32372863-323730... 93 4e-19
09_04_0359 + 16941904-16942110,16943636-16943785,16944084-169442... 91 8e-19
03_03_0128 - 14677152-14677296,14677381-14677457,14679836-14680312 86 4e-17
07_03_1385 + 26189034-26189294,26189427-26189636,26191016-261910... 79 4e-15
03_05_1098 - 30395704-30395837,30396644-30396751,30396933-303971... 64 1e-10
06_01_0751 + 5630036-5630233,5630623-5630718,5631420-5631629,563... 61 1e-09
08_02_1381 - 26551920-26552053,26552963-26553070,26553154-265533... 46 3e-05
09_04_0676 - 19383757-19383890,19384308-19384415,19384493-193846... 39 0.005
08_02_0963 + 23068851-23069042,23069262-23069414,23069590-230696... 32 0.53
01_03_0103 - 12567986-12568141,12568307-12568442,12568751-125688... 31 1.6
01_01_0608 - 4513604-4513701,4513790-4513919,4514027-4514116,451... 30 2.1
07_03_1551 + 27646445-27647096,27647229-27647374 29 3.8
01_07_0226 + 42130300-42131430,42131530-42131715,42133244-421333... 29 5.0
08_01_0889 + 8753877-8754236,8754995-8755054,8755174-8755250,875... 28 8.7
07_03_1124 + 24157441-24157483,24157989-24158020,24158135-241583... 28 8.7
02_02_0062 - 6476019-6476419,6476624-6476960,6476985-6479657 28 8.7
>02_05_0873 -
32372143-32372287,32372678-32372754,32372863-32373072,
32374645-32374869
Length = 218
Score = 92.7 bits (220), Expect = 4e-19
Identities = 49/140 (35%), Positives = 84/140 (60%)
Frame = +3
Query: 318 GHILSQKDTVTKGKFSFVTENYDMFEVCFISKVPSERRGIPHQVSLDIKIGIEAKTYEGI 497
G+ L + T G+F+F T + CF + S +G ++LD KIGI AK ++ I
Sbjct: 81 GNTLHHNENATVGQFAFTTSEAGNYLACFW--IDSAEKGSGISINLDWKIGIAAKDWDVI 138
Query: 498 GEAAKLKPMEVELKRLEDLSEAIVQDFTLMRKREXEMRDTNESTNNRVLFFSIFSMACLL 677
+ K++ +E+EL++LE ++I Q+ ++ RE EMR +E TN RV +FSI S++ +
Sbjct: 139 AKKEKIEGVELELRKLEVAVQSIHQNMIYLKAREAEMRTVSEKTNARVAWFSILSLSVCI 198
Query: 678 GLATWQVLYLRRFFKAKKLI 737
++ Q+ +L+ +F+ KKLI
Sbjct: 199 VVSILQLWHLQGYFQKKKLI 218
>09_04_0359 +
16941904-16942110,16943636-16943785,16944084-16944293,
16944376-16944452,16944554-16944698
Length = 262
Score = 91.5 bits (217), Expect = 8e-19
Identities = 47/140 (33%), Positives = 85/140 (60%)
Frame = +3
Query: 318 GHILSQKDTVTKGKFSFVTENYDMFEVCFISKVPSERRGIPHQVSLDIKIGIEAKTYEGI 497
G I+ K V+ G+FSF T + CF + ++R + +++LD ++GI K ++ +
Sbjct: 125 GDIVHHKQKVSTGQFSFTTAEAGNYLACFSADGRNKRLVV--KLNLDWRVGIATKDWDSV 182
Query: 498 GEAAKLKPMEVELKRLEDLSEAIVQDFTLMRKREXEMRDTNESTNNRVLFFSIFSMACLL 677
+ KL+ +E+EL +LE +AI ++ L+R +E MRDT+E TN R + SI S+ +
Sbjct: 183 AKKEKLEGVELELVKLETSVQAIHENLLLLRSKEANMRDTSEKTNARATWLSIISLIVCI 242
Query: 678 GLATWQVLYLRRFFKAKKLI 737
++ Q+ +L+++F+ KKLI
Sbjct: 243 IVSVLQLWHLQQYFRKKKLI 262
Score = 35.5 bits (78), Expect = 0.057
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Frame = +2
Query: 155 SLIWH---GTDAIMWSLAPNTHKCLKEELHANVLVAGEYDV 268
+L+W G A+ + P+ KC+ EE+ +NV+V G+Y V
Sbjct: 16 ALLWWMAAGAGAVWLEIPPSATKCVSEEIQSNVVVIGDYSV 56
>03_03_0128 - 14677152-14677296,14677381-14677457,14679836-14680312
Length = 232
Score = 85.8 bits (203), Expect = 4e-17
Identities = 46/150 (30%), Positives = 77/150 (51%)
Frame = +3
Query: 288 RVDYIIKDSKGHILSQKDTVTKGKFSFVTENYDMFEVCFISKVPSERRGIPHQVSLDIKI 467
RV + G+ L + V G F+F + CF + P R D +
Sbjct: 85 RVSLRVTSPYGNSLHYSENVQSGNFAFTASEAGDYLACFWA--PDHRPTATVGFEFDWRS 142
Query: 468 GIEAKTYEGIGEAAKLKPMEVELKRLEDLSEAIVQDFTLMRKREXEMRDTNESTNNRVLF 647
G+ A+ + + + ++ MEVELK+LED +I ++ +R RE EM++ N TN+R+ +
Sbjct: 143 GVSARDWTNVAKKGQVDMMEVELKKLEDTINSIHEEMFYLRAREEEMQELNRRTNSRMAW 202
Query: 648 FSIFSMACLLGLATWQVLYLRRFFKAKKLI 737
FS+A L +A Q+ +L+ FF+ KKL+
Sbjct: 203 LGFFSLAICLSVAGLQLWHLKNFFERKKLL 232
>07_03_1385 +
26189034-26189294,26189427-26189636,26191016-26191092,
26191196-26191340
Length = 230
Score = 79.4 bits (187), Expect = 4e-15
Identities = 40/150 (26%), Positives = 79/150 (52%)
Frame = +3
Query: 288 RVDYIIKDSKGHILSQKDTVTKGKFSFVTENYDMFEVCFISKVPSERRGIPHQVSLDIKI 467
R+ + G+ + + V G F+F + CF + P + + D +
Sbjct: 83 RISLRVTSPYGNSVHYAENVPSGNFAFTATEAGDYLACFWA--PDHKPPVSIGFEFDWRS 140
Query: 468 GIEAKTYEGIGEAAKLKPMEVELKRLEDLSEAIVQDFTLMRKREXEMRDTNESTNNRVLF 647
G+ AK + + + ++ ME+ELK+LE+ ++I ++ +R+RE EM++ N+ TN+R+ +
Sbjct: 141 GVAAKDWSNVAKKGQVDVMEMELKKLEETIKSIHEEMFYLREREEEMQNLNKQTNSRMAW 200
Query: 648 FSIFSMACLLGLATWQVLYLRRFFKAKKLI 737
S+ L +A Q+ +L+ FF+ KKL+
Sbjct: 201 LGFLSLGICLSVAGLQLWHLKTFFERKKLL 230
Score = 29.5 bits (63), Expect = 3.8
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +2
Query: 140 LVLLLSLIWHGTDAIMWSLAPNTHKCLKEELHANVLVAGEYDV 268
++LLLS A+ + L KC+ +E+ N +V G+Y V
Sbjct: 24 VLLLLSAAPRTARALRFDLESGHTKCISDEIKVNSMVVGKYHV 66
>03_05_1098 -
30395704-30395837,30396644-30396751,30396933-30397119,
30398127-30398330
Length = 210
Score = 64.5 bits (150), Expect = 1e-10
Identities = 38/143 (26%), Positives = 66/143 (46%)
Frame = +3
Query: 291 VDYIIKDSKGHILSQKDTVTKGKFSFVTENYDMFEVCFISKVPSERRGIPHQVSLDIKIG 470
+D + G+ + + KF F M++ CF + G P VS I +G
Sbjct: 65 IDLTVTSPGGNTVYTLKGKSGDKFEFKAPRGGMYKFCFHNPY-----GAPETVSFYIHVG 119
Query: 471 IEAKTYEGIGEAAKLKPMEVELKRLEDLSEAIVQDFTLMRKREXEMRDTNESTNNRVLFF 650
+ + L P+ V++ L++ E++ + ++ RE R TNEST RV+F+
Sbjct: 120 -HIPNEHNLAKDEHLDPINVKIAELKEALESVTAEQKYLKAREARHRHTNESTRRRVMFY 178
Query: 651 SIFSMACLLGLATWQVLYLRRFF 719
+I +G + QV+Y+RR F
Sbjct: 179 TIAEYLAFMGASALQVVYIRRLF 201
>06_01_0751 +
5630036-5630233,5630623-5630718,5631420-5631629,
5631735-5631811,5632204-5632222,5632304-5632348
Length = 214
Score = 61.3 bits (142), Expect = 1e-09
Identities = 31/98 (31%), Positives = 55/98 (56%)
Frame = +3
Query: 318 GHILSQKDTVTKGKFSFVTENYDMFEVCFISKVPSERRGIPHQVSLDIKIGIEAKTYEGI 497
G+ + + T G+F+F T + CF P + G+ ++LD KIGI AK ++ +
Sbjct: 104 GNTVHHNENATTGQFAFTTSEAGNYLACFWLDSPEKGSGV--SLNLDWKIGIAAKDWDTV 161
Query: 498 GEAAKLKPMEVELKRLEDLSEAIVQDFTLMRKREXEMR 611
+ K++ +E+EL++LE E+I + ++ RE EMR
Sbjct: 162 AKKEKIEGVELELRKLEAAVESIHHNLLYLKAREAEMR 199
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Frame = +2
Query: 131 VQYLVLLLSLIWHG--TDAIMWSLAPNTHKCLKEELHANVLVAGEY 262
V +V++++L+ G +A+ L P KC+ EE+ NV+V +Y
Sbjct: 4 VAAMVVVVALLLGGGAVEAVWLDLPPTGTKCVSEEIQPNVVVLADY 49
>08_02_1381 -
26551920-26552053,26552963-26553070,26553154-26553340,
26554107-26554316
Length = 212
Score = 46.4 bits (105), Expect = 3e-05
Identities = 32/151 (21%), Positives = 61/151 (40%)
Frame = +3
Query: 276 YRXQRVDYIIKDSKGHILSQKDTVTKGKFSFVTENYDMFEVCFISKVPSERRGIPHQVSL 455
Y VD ++KD G + T KF F+ + + CF +K P V
Sbjct: 62 YSEDGVDLVVKDPNGAQVRDSRDKTSDKFEFIVQKRGVHRFCFTNKSPYH-----ETVDF 116
Query: 456 DIKIGIEAKTYEGIGEAAKLKPMEVELKRLEDLSEAIVQDFTLMRKREXEMRDTNESTNN 635
D+ +G ++ + P+ ++ +L++ I + + + NE+ +
Sbjct: 117 DVHVG-HFSYFDQHAKDEHFAPLFEQIAKLDEALYNIQFEQHWLEAQTDRQAILNENMSR 175
Query: 636 RVLFFSIFSMACLLGLATWQVLYLRRFFKAK 728
R + ++ A L+ + QV LRR F+ K
Sbjct: 176 RAVHKALLESAALIAASVIQVYLLRRLFERK 206
>09_04_0676 -
19383757-19383890,19384308-19384415,19384493-19384679,
19384937-19385143
Length = 211
Score = 39.1 bits (87), Expect = 0.005
Identities = 29/151 (19%), Positives = 57/151 (37%)
Frame = +3
Query: 276 YRXQRVDYIIKDSKGHILSQKDTVTKGKFSFVTENYDMFEVCFISKVPSERRGIPHQVSL 455
Y VD +++D G+ + KF F+ + CF +K P V
Sbjct: 61 YTEDGVDLVVRDPNGNQIHDSRDKISDKFEFIVHRRGVHRFCFTNKSPYH-----ETVDF 115
Query: 456 DIKIGIEAKTYEGIGEAAKLKPMEVELKRLEDLSEAIVQDFTLMRKREXEMRDTNESTNN 635
D+ + Y+ + + ++ +L++ I + + + NE+ +
Sbjct: 116 DVLVS-HFSYYDQHAKDEHFSALFEQIAKLDEALYNIQFEQHWLEAQTDRQAILNENMSR 174
Query: 636 RVLFFSIFSMACLLGLATWQVLYLRRFFKAK 728
R + + F A L+ + QV L R F+ K
Sbjct: 175 RAVHKAFFESAALIAASVVQVYLLHRLFERK 205
>08_02_0963 +
23068851-23069042,23069262-23069414,23069590-23069666,
23069744-23069762,23070182-23070202
Length = 153
Score = 32.3 bits (70), Expect = 0.53
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +2
Query: 140 LVLLLSLIWHGTDAIMWSLAPNTHKCLKEELHANVLVAGEYDV 268
L L L + +A+ L+ KC E + +NV+V G+YD+
Sbjct: 8 LALALWCLVADGEAVWMELSTTATKCFSERIQSNVVVIGDYDI 50
>01_03_0103 -
12567986-12568141,12568307-12568442,12568751-12568824,
12568932-12569175,12569480-12569766,12570618-12571103,
12571348-12571459,12571540-12571745,12573071-12573276,
12573831-12574162,12574284-12574825,12574967-12576308,
12576386-12576457,12578438-12578505,12579011-12580174
Length = 1808
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = -1
Query: 518 LQFCSLPDPFISLCFYADFNI*AYLMWNTSSF*WYFRYKANFKHIIIL 375
L C + S Y+ FN+ + L W + S W+ +N+++I++L
Sbjct: 647 LTLCCFEEDCSSRAIYSGFNLSSSLDWQSYSKRWWMGELSNYEYILVL 694
>01_01_0608 -
4513604-4513701,4513790-4513919,4514027-4514116,
4514225-4514330,4514442-4514542,4514678-4514773,
4514860-4514959,4515133-4515269,4515563-4515661,
4515740-4515937,4516058-4516235,4516635-4516690,
4516781-4516933,4517248-4517340,4517422-4517523,
4517609-4517650,4517812-4517855,4518087-4518186,
4518323-4518394,4518499-4518621,4519309-4519452
Length = 753
Score = 30.3 bits (65), Expect = 2.1
Identities = 21/96 (21%), Positives = 46/96 (47%), Gaps = 3/96 (3%)
Frame = +3
Query: 369 VTENYDMFEVCFISKVPSERRG---IPHQVSLDIKIGIEAKTYEGIGEAAKLKPMEVELK 539
VT D F+ + V R+G + HQ + +IK E K + + +P+E LK
Sbjct: 341 VTYTSDYFQALYEHAVELIRKGLAYVDHQTAEEIKEYREKK----MNSPWRDRPIEESLK 396
Query: 540 RLEDLSEAIVQDFTLMRKREXEMRDTNESTNNRVLF 647
ED+ ++ + + + +M++ N++ ++ + +
Sbjct: 397 LFEDMRRGLIAEGAATLRMKQDMQNDNKNMSDLIAY 432
>07_03_1551 + 27646445-27647096,27647229-27647374
Length = 265
Score = 29.5 bits (63), Expect = 3.8
Identities = 12/51 (23%), Positives = 25/51 (49%)
Frame = -3
Query: 288 FAPCISVTSYSPATNTLACNSSFKHLCVFGAKLHIIASVPCQIKLSNNTRY 136
F C+ + +PA + +A + ++ +C+FG K +I ++L Y
Sbjct: 189 FLRCLQSSRQTPARDGIAAAAIYRSMCIFGLKTILIPYRTNLVRLQTGPNY 239
>01_07_0226 +
42130300-42131430,42131530-42131715,42133244-42133345,
42133425-42133481,42133563-42133658,42133736-42133828,
42133945-42134064,42134155-42134187,42134266-42134316,
42135129-42135191
Length = 643
Score = 29.1 bits (62), Expect = 5.0
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +3
Query: 348 TKGKFSFVTENYDMFEVCFISKVPSE 425
T+G+F + ENYD++ C VP +
Sbjct: 585 TRGRFRSMKENYDLYVACIDETVPEK 610
>08_01_0889 +
8753877-8754236,8754995-8755054,8755174-8755250,
8755481-8755622,8755736-8755772,8755852-8755921,
8756021-8756212,8756321-8756413,8756545-8756773,
8756861-8756944,8757041-8757192,8757279-8757375,
8757576-8757725,8757813-8757890,8757982-8758104,
8758169-8758315,8758418-8758472,8758807-8758874
Length = 737
Score = 28.3 bits (60), Expect = 8.7
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +2
Query: 662 DGVPLGSGHLASPVPSQV 715
DG PLG G LA P PS +
Sbjct: 385 DGTPLGGGSLAPPFPSPI 402
>07_03_1124 +
24157441-24157483,24157989-24158020,24158135-24158353,
24158553-24158634,24158726-24158898
Length = 182
Score = 28.3 bits (60), Expect = 8.7
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +2
Query: 116 TINMEVQYLVLLLSLIWHGTDAIMWSLAPNTHKCLKEELH-ANVLVAGEYDVTEIQG 283
T+ M LVL L+++WH + + L H C + L+ A + AG D + G
Sbjct: 84 TVGMVHLVLVLHLTMLWHMEERVDNLLHRGGHLCRDQSLNDAEAIEAGWLDCLRVVG 140
>02_02_0062 - 6476019-6476419,6476624-6476960,6476985-6479657
Length = 1136
Score = 28.3 bits (60), Expect = 8.7
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +3
Query: 471 IEAKTYEGIGEAAKLKPMEVELKRLEDLSEAIVQDFTLMRK 593
IE K EGIG LK + +++ RLE + A + ++ K
Sbjct: 507 IEGKIPEGIGNLINLKLLYMDINRLEGIIPASLGKLKMLNK 547
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,824,514
Number of Sequences: 37544
Number of extensions: 379133
Number of successful extensions: 879
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 843
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 876
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2506954360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -