Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP08_F_I01
         (1058 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0446 + 3321832-3322232,3322398-3322455,3322810-3323748,332...    31   1.2  
06_01_0474 - 3362734-3362827,3363179-3363366,3363458-3363700,336...    30   3.6  
02_05_0686 - 30900748-30902167,30903442-30904742                       30   3.6  
02_04_0407 + 22645775-22645865,22645998-22646269                       29   4.7  

>01_01_0446 +
           3321832-3322232,3322398-3322455,3322810-3323748,
           3324504-3324654,3324740-3324818,3325826-3325934
          Length = 578

 Score = 31.5 bits (68), Expect = 1.2
 Identities = 13/30 (43%), Positives = 13/30 (43%)
 Frame = -3

Query: 492 PKKXPXXXGXPPPRXPXPFGXPGGXGXXXP 403
           P   P   G PPP  P   G PGG G   P
Sbjct: 347 PGSYPPSYGAPPPNPPYSGGAPGGQGSLPP 376


>06_01_0474 -
           3362734-3362827,3363179-3363366,3363458-3363700,
           3363820-3364098,3364189-3364386,3364475-3365110,
           3365209-3365463,3365579-3365685,3365770-3369566,
           3369677-3370166,3370918-3371308,3371481-3371573,
           3371687-3371810,3372544-3372791
          Length = 2380

 Score = 29.9 bits (64), Expect = 3.6
 Identities = 12/26 (46%), Positives = 12/26 (46%)
 Frame = -3

Query: 480 PXXXGXPPPRXPXPFGXPGGXGXXXP 403
           P   G PPP  P   G PGG G   P
Sbjct: 7   PPGTGAPPPPPPAAVGPPGGVGGGKP 32


>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 29.9 bits (64), Expect = 3.6
 Identities = 14/41 (34%), Positives = 15/41 (36%)
 Frame = -3

Query: 492 PKKXPXXXGXPPPRXPXPFGXPGGXGXXXPKXXXPKTPXXP 370
           P   P   G  PP  P P G  GG     PK    + P  P
Sbjct: 353 PPPPPPPKGPSPPPPPPPGGKKGGPPPPPPKGGASRPPAAP 393


>02_04_0407 + 22645775-22645865,22645998-22646269
          Length = 120

 Score = 29.5 bits (63), Expect = 4.7
 Identities = 14/31 (45%), Positives = 14/31 (45%)
 Frame = +3

Query: 894 GGNXPPPXGGGXXXFGRFKXXPXXXGGGXXP 986
           GG   PP GGG    GR    P   GGG  P
Sbjct: 48  GGGGYPPRGGGYGYPGRGYGYPGRGGGGGYP 78


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,280,087
Number of Sequences: 37544
Number of extensions: 384417
Number of successful extensions: 463
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 327
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 433
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3141165724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)