Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP08_F_H22
(886 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_1115 - 34225793-34225843,34225998-34226072,34226861-342268... 65 8e-11
11_06_0212 - 21319441-21319498,21319737-21319867,21319944-213200... 46 3e-05
12_01_0398 - 3143745-3143777,3144045-3144126,3144863-3144975,314... 40 0.002
02_03_0230 + 16620856-16620991,16622157-16622239,16632090-166321... 39 0.005
01_05_0457 + 22423998-22424039,22424139-22424415,22424540-224246... 38 0.008
01_05_0593 + 23494515-23494706,23495819-23495936,23496302-234963... 38 0.011
11_01_0449 - 3473662-3475049,3476026-3476128,3476215-3476439,347... 34 0.17
01_06_0462 + 29561928-29561957,29562101-29562317,29562412-295624... 33 0.23
01_05_0049 + 17577358-17577993 33 0.23
04_04_0786 - 28052981-28053040,28053123-28053222,28053447-280535... 32 0.70
08_02_0821 + 21545013-21545082,21545660-21545769,21546302-215463... 31 0.93
05_01_0356 + 2785410-2785670,2785843-2785960,2786800-2786891,278... 31 1.2
02_01_0206 + 1388149-1388330,1388527-1388629,1388896-1388964,138... 31 1.2
10_08_0954 + 21779561-21779639,21779780-21779862,21786887-217869... 31 1.6
07_03_0588 - 19715677-19715754,19715843-19715942,19716170-197162... 31 1.6
12_01_0450 - 3552701-3552865,3552971-3553195,3553306-3553473,355... 30 2.8
12_01_0217 + 1647319-1648327,1648462-1648577,1648650-1648817,164... 29 3.8
11_01_0216 + 1693889-1694897,1695034-1695149,1695222-1695389,169... 29 3.8
05_06_0200 + 26329211-26329251,26329471-26329564,26329691-263297... 29 3.8
01_05_0743 + 24835349-24836009,24836925-24837068,24837154-248373... 29 3.8
05_07_0280 - 28920864-28920971,28921076-28921175,28921267-289213... 29 5.0
03_05_0385 + 23689664-23689784,23689930-23690012,23690138-236901... 29 5.0
04_04_0881 + 29055724-29059197 29 6.6
08_02_1240 + 25504789-25504794,25505421-25505555,25505854-255059... 28 8.7
02_05_0340 + 28105222-28105960,28106844-28106987,28107083-281072... 28 8.7
>02_05_1115 -
34225793-34225843,34225998-34226072,34226861-34226898,
34227017-34227113,34227843-34227967,34228071-34228140
Length = 151
Score = 64.9 bits (151), Expect = 8e-11
Identities = 41/124 (33%), Positives = 68/124 (54%), Gaps = 2/124 (1%)
Frame = +3
Query: 300 MGNKSSLLLREEXIAQIQEETG--FTPNQIERLYSRFTSLDKNDCGTLSREDFLRIPELA 473
MGN SS+L + + I ++QE F+ +I LY RF LD++ G +S ++FL IPE +
Sbjct: 1 MGNASSMLTQYD-IEEVQEHCNYLFSQQEIVSLYERFCQLDRSAKGFISEDEFLSIPEFS 59
Query: 474 INPLSERIVQSFFAESHDDRVNFLQFMRVLAXFXPIKXNRENXLXCREEKLRFAFSMYDL 653
+NPLS+R+++ D +NF F+ L+ F + ++K+ F +YD+
Sbjct: 60 LNPLSKRLLRMV------DGLNFKDFVSFLSTF--------SAKASVQQKIELIFKVYDI 105
Query: 654 DXDG 665
D G
Sbjct: 106 DGKG 109
>11_06_0212 -
21319441-21319498,21319737-21319867,21319944-21320033,
21320141-21320298,21320646-21320721
Length = 170
Score = 46.4 bits (105), Expect = 3e-05
Identities = 34/115 (29%), Positives = 54/115 (46%), Gaps = 1/115 (0%)
Frame = +3
Query: 357 ETGFTPNQIERLYSRFTSLDKNDCGTLSREDFLRI-PELAINPLSERIVQSFFAESHDDR 533
E+ QI F+ DKN+ G +SRE+ + L + P S+ +Q +D
Sbjct: 2 ESHLNEQQISDFRDAFSLFDKNNDGCISREELATVLTRLGMAP-SQEDLQDMIVAVDEDG 60
Query: 534 VNFLQFMRVLAXFXPIKXNRENXLXCREEKLRFAFSMYDLDXDGXISXDDLLAIL 698
++F LA K EN EE+LR AF ++D D +G IS ++L ++
Sbjct: 61 NGTIEFDEFLAIMK--KKLYENDKGDDEEELRKAFRIFDKDDNGFISRNELSMVM 113
>12_01_0398 -
3143745-3143777,3144045-3144126,3144863-3144975,
3145072-3145152,3145517-3145569,3146042-3146150,
3147512-3147571,3147689-3147771,3147913-3148086,
3148133-3148172
Length = 275
Score = 40.3 bits (90), Expect = 0.002
Identities = 32/119 (26%), Positives = 54/119 (45%), Gaps = 5/119 (4%)
Frame = +3
Query: 345 QIQEETGFTPNQIERLYSRFTSLDKN--DCGTLSREDF---LRIPELAINPLSERIVQSF 509
++ ET F N+IE LY F + D G +++E+F L + ++R+
Sbjct: 65 RLARETVFNVNEIEALYELFKKISSAVVDDGLINKEEFQLALFKTNRKDSMFADRVFD-L 123
Query: 510 FAESHDDRVNFLQFMRVLAXFXPIKXNRENXLXCREEKLRFAFSMYDLDXDGXISXDDL 686
F H+ + F +F R L+ F P ++K+ FAF +YDL G I ++
Sbjct: 124 FDTKHNGILGFEEFARALSVFHPNAPI--------DDKIDFAFKLYDLKQQGFIEKQEV 174
>02_03_0230 +
16620856-16620991,16622157-16622239,16632090-16632149,
16632795-16632903,16633285-16633337,16633503-16633559,
16633730-16633846
Length = 204
Score = 39.1 bits (87), Expect = 0.005
Identities = 32/115 (27%), Positives = 56/115 (48%), Gaps = 5/115 (4%)
Frame = +3
Query: 357 ETGFTPNQIERLYSRFTSLDKN--DCGTLSREDF-LRI--PELAINPLSERIVQSFFAES 521
+T FT N+IE LY F +D + G +++E+F LR+ PE ++++ F +
Sbjct: 43 QTIFTVNEIEALYELFKRIDGAIIEYGKINKEEFNLRVFGPEKGGTMFTDQVFDLFDLKL 102
Query: 522 HDDRVNFLQFMRVLAXFXPIKXNRENXLXCREEKLRFAFSMYDLDXDGXISXDDL 686
+ + F +F L+ F P E+K+ F+F +YD+ G I +L
Sbjct: 103 -EQALGFEEFAVALSIFHPDTP--------MEDKIDFSFQLYDIKNQGFIERAEL 148
>01_05_0457 +
22423998-22424039,22424139-22424415,22424540-22424622,
22425378-22425437,22425610-22425718,22425805-22425857,
22425953-22426033,22426125-22426237,22426421-22426475
Length = 290
Score = 38.3 bits (85), Expect = 0.008
Identities = 33/136 (24%), Positives = 68/136 (50%), Gaps = 7/136 (5%)
Frame = +3
Query: 312 SSLLLREEXIAQIQEETG-FTPNQIERLYSRFTSLDKN--DCGTLSREDF----LRIPEL 470
+SL LR+ +A++ +E+ F+ N++E L+ + + + D G + +E+ + P
Sbjct: 90 TSLTLRQ--LARLADESRCFSVNEVEALFELYKKISCSIIDDGLIHKEELQLALFKTPS- 146
Query: 471 AINPLSERIVQSFFAESHDDRVNFLQFMRVLAXFXPIKXNRENXLXCREEKLRFAFSMYD 650
N +R+ F E + + F +F+ L+ F P+ E+K+ FAF +YD
Sbjct: 147 GQNLFLDRVFD-LFDEKKNGVIEFDEFIHALSVFHPLAP--------LEDKINFAFRLYD 197
Query: 651 LDXDGXISXDDLLAIL 698
L G I ++++ ++
Sbjct: 198 LRQTGFIEREEVMQMV 213
>01_05_0593 +
23494515-23494706,23495819-23495936,23496302-23496384,
23496468-23496524,23497004-23497112,23497230-23497282,
23497644-23497724,23497815-23497931
Length = 269
Score = 37.9 bits (84), Expect = 0.011
Identities = 32/113 (28%), Positives = 49/113 (43%), Gaps = 4/113 (3%)
Frame = +3
Query: 360 TGFTPNQIERLYSRFTSLDKNDC--GTLSREDF--LRIPELAINPLSERIVQSFFAESHD 527
T FT N++E LY F L + G + +E+F N +R+ F + +
Sbjct: 102 TPFTVNEVEALYDLFRKLSNSIIKDGLIHKEEFHLALFRNKKTNLFVDRVFD-LFDQKGN 160
Query: 528 DRVNFLQFMRVLAXFXPIKXNRENXLXCREEKLRFAFSMYDLDXDGXISXDDL 686
+ F +F+R L+ F P E+K FAF +YDL G I +L
Sbjct: 161 GVIEFDEFVRSLSVFHPDAPE--------EQKAGFAFKLYDLRQTGFIERHEL 205
>11_01_0449 -
3473662-3475049,3476026-3476128,3476215-3476439,
3476689-3476856,3477414-3477529,3477640-3477792,
3477879-3478022,3478980-3479583
Length = 966
Score = 33.9 bits (74), Expect = 0.17
Identities = 27/103 (26%), Positives = 47/103 (45%)
Frame = +3
Query: 378 QIERLYSRFTSLDKNDCGTLSREDFLRIPELAINPLSERIVQSFFAESHDDRVNFLQFMR 557
+I L F +D +D GT++ ++ + + L+E +Q+ + D + +
Sbjct: 349 EIGGLKELFKMIDTDDSGTITFDELKEGLKRVGSELTEHEIQALMEAADIDNSGTIDYGE 408
Query: 558 VLAXFXPIKXNRENXLXCREEKLRFAFSMYDLDXDGXISXDDL 686
+A + N L REE L AFS +D D G I+ D+L
Sbjct: 409 FIAATLHM-----NKLE-REENLVSAFSFFDKDGSGFITIDEL 445
>01_06_0462 +
29561928-29561957,29562101-29562317,29562412-29562494,
29563065-29563124,29563526-29563634,29563732-29563784,
29564270-29564350,29564431-29564547
Length = 249
Score = 33.5 bits (73), Expect = 0.23
Identities = 35/138 (25%), Positives = 65/138 (47%), Gaps = 7/138 (5%)
Frame = +3
Query: 294 RKMGNKSSLLLREEXIAQIQEETG-FTPNQIERLYSRFTSLDKN--DCGTLSREDF---- 452
R+ G + L RE +A + +E+ F+ N++E LY + + + D G + +E+
Sbjct: 62 RRAGGR--LTFRE--LADLADESRCFSVNEVEALYELYKKISCSIVDDGLIHKEELQLAL 117
Query: 453 LRIPELAINPLSERIVQSFFAESHDDRVNFLQFMRVLAXFXPIKXNRENXLXCREEKLRF 632
R P N +R+ F E + + F +F+ ++ F P L E+K+ F
Sbjct: 118 FRTPA-GKNLFLDRVFD-LFDEKKNSVIEFEEFIHAISVFHP-----NTPL---EDKIDF 167
Query: 633 AFSMYDLDXDGXISXDDL 686
+F +YDL G I +++
Sbjct: 168 SFRLYDLRQTGFIEREEV 185
>01_05_0049 + 17577358-17577993
Length = 211
Score = 33.5 bits (73), Expect = 0.23
Identities = 27/126 (21%), Positives = 58/126 (46%), Gaps = 1/126 (0%)
Frame = +3
Query: 312 SSLLLREEXIAQIQEETGFTPNQIERLYSRFTSLDKNDCGTLSREDF-LRIPELAINPLS 488
SS +++ Q Q+E +Q+ L F S D+N G+L++ + + L + P +
Sbjct: 39 SSCSAQQQQQQQQQQEEPLGDDQLGELREIFRSFDRNGDGSLTQLELGSLLRSLGLKPST 98
Query: 489 ERIVQSFFAESHDDRVNFLQFMRVLAXFXPIKXNRENXLXCREEKLRFAFSMYDLDXDGX 668
+ + S + + ++F +A P + E+++R F+++D D +G
Sbjct: 99 DEL-DSLIQRADTNSNGLIEFSEFVALVAP--ELLYDRAPYSEDQIRRLFNIFDRDGNGF 155
Query: 669 ISXDDL 686
I+ +L
Sbjct: 156 ITAAEL 161
>04_04_0786 -
28052981-28053040,28053123-28053222,28053447-28053574,
28053654-28053821,28053901-28054013,28054135-28054287,
28054385-28054528,28054794-28055529
Length = 533
Score = 31.9 bits (69), Expect = 0.70
Identities = 28/107 (26%), Positives = 49/107 (45%), Gaps = 1/107 (0%)
Frame = +3
Query: 369 TPNQIERLYSRFTSLDKNDCGTLSREDF-LRIPELAINPLSERIVQSFFAESHDDRVNFL 545
+P +I+ L F ++D + GT++ E+ + + +L + +SE VQ D+ +
Sbjct: 389 SPEEIKGLKQMFNNMDTDRSGTITVEELKVGLTKLG-SRISEAEVQKLMEAVDVDKSGSI 447
Query: 546 QFMRVLAXFXPIKXNRENXLXCREEKLRFAFSMYDLDXDGXISXDDL 686
+ L K E +EE L AF +D D G I+ D+L
Sbjct: 448 DYSEFLTAMIN-KHKLE-----KEEDLLRAFQHFDKDNSGYITRDEL 488
>08_02_0821 +
21545013-21545082,21545660-21545769,21546302-21546376,
21546825-21546875
Length = 101
Score = 31.5 bits (68), Expect = 0.93
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +3
Query: 630 FAFSMYDLDXDGXISXDDLLAILHMMVGA 716
F F +YD D +G ++ DD+L+IL + G+
Sbjct: 24 FIFRVYDTDCNGKVAFDDILSILRDLSGS 52
>05_01_0356 +
2785410-2785670,2785843-2785960,2786800-2786891,
2787114-2787176,2787299-2787397,2787726-2787884,
2788420-2788491,2788567-2788699,2788813-2788877,
2789016-2789091,2789236-2789337,2789524-2789716,
2790576-2790654,2792939-2793007,2793261-2793311,
2793680-2793742,2793926-2794041,2794263-2794347,
2794898-2794957,2795594-2795639,2796011-2796084,
2796350-2796400,2796474-2796674,2796747-2796791,
2797063-2797156,2797226-2797371,2797510-2797739,
2798136-2798196,2798290-2798347,2799020-2799513
Length = 1151
Score = 31.1 bits (67), Expect = 1.2
Identities = 19/63 (30%), Positives = 32/63 (50%)
Frame = +3
Query: 330 EEXIAQIQEETGFTPNQIERLYSRFTSLDKNDCGTLSREDFLRIPELAINPLSERIVQSF 509
EE Q E F+ +R+ F +LDK+ GTLS+++ + E A L++ ++
Sbjct: 358 EEVTDTEQAENWFSLTSAQRICDMFLALDKDTNGTLSKQE---LKEYADGTLTDIFIERV 414
Query: 510 FAE 518
F E
Sbjct: 415 FDE 417
>02_01_0206 +
1388149-1388330,1388527-1388629,1388896-1388964,
1389684-1389803,1390352-1390482,1390840-1390881,
1390961-1391138,1391241-1391319,1391441-1391610,
1392503-1392629,1392731-1392846,1392926-1393033,
1393118-1393180,1393283-1393456,1393814-1393978
Length = 608
Score = 31.1 bits (67), Expect = 1.2
Identities = 27/113 (23%), Positives = 50/113 (44%), Gaps = 5/113 (4%)
Frame = +3
Query: 378 QIERLYSRFTSLDKNDCGTLSREDFLR-----IPELAINPLSERIVQSFFAESHDDRVNF 542
++ L +F ++D + G++S E+ +P P I+Q+ + + D V+F
Sbjct: 449 ELADLKDQFDAIDVDKSGSISIEEMRHALAKDLPWRLKGPRVLEIIQAIDSNT-DGLVDF 507
Query: 543 LQFMRVLAXFXPIKXNRENXLXCREEKLRFAFSMYDLDXDGXISXDDLLAILH 701
+F+ + R + AFS +DLD DG I+ D+L + H
Sbjct: 508 EEFVAATLHIHQMAELDSERWGLR---CQAAFSKFDLDGDGYITPDELRMVQH 557
>10_08_0954 +
21779561-21779639,21779780-21779862,21786887-21786946,
21786980-21787169,21787250-21787302,21787523-21787603,
21787703-21787819
Length = 220
Score = 30.7 bits (66), Expect = 1.6
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +3
Query: 615 EEKLRFAFSMYDLDXDGXISXDDLLAILHMMVG 713
EEK+ F+F +YD+D G I ++ +L ++G
Sbjct: 133 EEKIDFSFKLYDMDNTGFIERKEVKQMLIALLG 165
>07_03_0588 -
19715677-19715754,19715843-19715942,19716170-19716297,
19716385-19716552,19716623-19716735,19716820-19716972,
19717082-19717225,19718710-19719427
Length = 533
Score = 30.7 bits (66), Expect = 1.6
Identities = 27/107 (25%), Positives = 48/107 (44%)
Frame = +3
Query: 378 QIERLYSRFTSLDKNDCGTLSREDFLRIPELAINPLSERIVQSFFAESHDDRVNFLQFMR 557
+I+ L FT++D ++ GT++ E+ + LSE V+ + D + ++
Sbjct: 386 EIKGLKQMFTNMDTDNSGTITYEELKAGLAKLGSKLSEAEVKQLMEAADVDGNGSIDYVE 445
Query: 558 VLAXFXPIKXNRENXLXCREEKLRFAFSMYDLDXDGXISXDDLLAIL 698
F +R R+E L AF +D D G I+ D+L + L
Sbjct: 446 ----FITATMHRHKLE--RDEHLFKAFQYFDKDNSGFITRDELESAL 486
>12_01_0450 -
3552701-3552865,3552971-3553195,3553306-3553473,
3554514-3554629,3554735-3554887,3554978-3555121,
3556667-3557276
Length = 526
Score = 29.9 bits (64), Expect = 2.8
Identities = 26/103 (25%), Positives = 46/103 (44%)
Frame = +3
Query: 378 QIERLYSRFTSLDKNDCGTLSREDFLRIPELAINPLSERIVQSFFAESHDDRVNFLQFMR 557
+I L F +D ++ GT++ ++ + + L E +Q+ + D + +
Sbjct: 351 EIGGLKELFKMIDTDNSGTITYDELKNGLKRVGSDLMEPEIQALMDAADIDNSGTIDYGE 410
Query: 558 VLAXFXPIKXNRENXLXCREEKLRFAFSMYDLDXDGXISXDDL 686
LA + N L REE L AF+ +D D G I+ D+L
Sbjct: 411 FLAATLHM-----NKLE-REENLVSAFTFFDKDGSGFITIDEL 447
>12_01_0217 +
1647319-1648327,1648462-1648577,1648650-1648817,
1648911-1649038,1649121-1649220,1649329-1649433
Length = 541
Score = 29.5 bits (63), Expect = 3.8
Identities = 22/103 (21%), Positives = 45/103 (43%)
Frame = +3
Query: 378 QIERLYSRFTSLDKNDCGTLSREDFLRIPELAINPLSERIVQSFFAESHDDRVNFLQFMR 557
+I+ L F ++DK++ GT++ E+ S+ ++ + D + +
Sbjct: 385 EIKGLKEMFKNIDKDNSGTITLEELKNGLAKQGTKFSDNEIEQLMEAADADGNGIIDYEE 444
Query: 558 VLAXFXPIKXNRENXLXCREEKLRFAFSMYDLDXDGXISXDDL 686
+ + N+ + REE L AF +D D G I+ ++L
Sbjct: 445 FVT--ATVHMNKMD----REEHLYTAFQYFDKDNSGYITKEEL 481
>11_01_0216 +
1693889-1694897,1695034-1695149,1695222-1695389,
1695482-1695609,1695692-1695791,1696124-1696168
Length = 521
Score = 29.5 bits (63), Expect = 3.8
Identities = 22/103 (21%), Positives = 45/103 (43%)
Frame = +3
Query: 378 QIERLYSRFTSLDKNDCGTLSREDFLRIPELAINPLSERIVQSFFAESHDDRVNFLQFMR 557
+I+ L F ++DK++ GT++ E+ S+ ++ + D + +
Sbjct: 385 EIKGLKEMFKNIDKDNSGTITLEELKNGLAKQGTKFSDNEIEQLMEAADADGNGIIDYEE 444
Query: 558 VLAXFXPIKXNRENXLXCREEKLRFAFSMYDLDXDGXISXDDL 686
+ + N+ + REE L AF +D D G I+ ++L
Sbjct: 445 FVT--ATVHMNKMD----REEHLYTAFQYFDKDNSGYITKEEL 481
>05_06_0200 +
26329211-26329251,26329471-26329564,26329691-26329750,
26329871-26329979,26330065-26330117,26330244-26330324,
26330429-26330541,26330637-26330691
Length = 201
Score = 29.5 bits (63), Expect = 3.8
Identities = 28/111 (25%), Positives = 49/111 (44%), Gaps = 5/111 (4%)
Frame = +3
Query: 369 TPNQIERLYSRFTSLDKNDC--GTLSREDF---LRIPELAINPLSERIVQSFFAESHDDR 533
T N++E L + + + G + +E+F L N ++R+ F + +
Sbjct: 19 TVNEVEALRELYNKMSYSIIKDGLIHKEEFQLALFRNSRKANLFADRVFDLFDLK-RNGV 77
Query: 534 VNFLQFMRVLAXFXPIKXNRENXLXCREEKLRFAFSMYDLDXDGXISXDDL 686
+ F +F+R L+ F P + EK FAF +YDL G I ++L
Sbjct: 78 IEFGEFVRSLSVFHPKAP--------KSEKTAFAFKLYDLRGTGYIEKEEL 120
>01_05_0743 +
24835349-24836009,24836925-24837068,24837154-24837306,
24837627-24837742,24837826-24837993,24838610-24838737,
24838827-24838926,24839119-24839205
Length = 518
Score = 29.5 bits (63), Expect = 3.8
Identities = 25/104 (24%), Positives = 48/104 (46%), Gaps = 1/104 (0%)
Frame = +3
Query: 378 QIERLYSRFTSLDKNDCGTLSREDFLR-IPELAINPLSERIVQSFFAESHDDRVNFLQFM 554
+I L F SLD ++ GT++ E+ +P+L +SE ++ + D + +
Sbjct: 368 EITGLKEMFRSLDTDNSGTITLEELRSGLPKLG-TKISESEIRQLMEAADVDGNGTIDYA 426
Query: 555 RVLAXFXPIKXNRENXLXCREEKLRFAFSMYDLDXDGXISXDDL 686
++ + NR +E+ + AF +D D G I+ D+L
Sbjct: 427 EFIS--ATMHMNRLE----KEDHILKAFEYFDKDHSGYITVDEL 464
>05_07_0280 -
28920864-28920971,28921076-28921175,28921267-28921394,
28922013-28922180,28922280-28922395,28922584-28922736,
28922904-28923047,28923401-28924133
Length = 549
Score = 29.1 bits (62), Expect = 5.0
Identities = 25/104 (24%), Positives = 49/104 (47%), Gaps = 1/104 (0%)
Frame = +3
Query: 378 QIERLYSRFTSLDKNDCGTLSREDF-LRIPELAINPLSERIVQSFFAESHDDRVNFLQFM 554
+I L F SLD ++ GT++ E+ +P+L +SE ++ + D + ++
Sbjct: 392 EIVGLKEMFKSLDTDNSGTITLEELRAGLPKLG-TKISESELRQLMEAADVDGNGSIDYV 450
Query: 555 RVLAXFXPIKXNRENXLXCREEKLRFAFSMYDLDXDGXISXDDL 686
++ + NR +E+ + AF +D D G I+ D+L
Sbjct: 451 EFIS--ATMHMNRLE----KEDHIYKAFEYFDKDHSGFITVDEL 488
>03_05_0385 +
23689664-23689784,23689930-23690012,23690138-23690197,
23690390-23690455,23690456-23690564,23691595-23691647,
23692948-23693028,23693319-23693390
Length = 214
Score = 29.1 bits (62), Expect = 5.0
Identities = 18/63 (28%), Positives = 28/63 (44%)
Frame = +3
Query: 498 VQSFFAESHDDRVNFLQFMRVLAXFXPIKXNRENXLXCREEKLRFAFSMYDLDXDGXISX 677
V F H+ + F +F R L+ F P +EK+ F+F +YDL G I
Sbjct: 111 VFDLFDTKHNGILGFEEFARALSVFHPNAP--------LDEKIDFSFQLYDLKQQGFIER 162
Query: 678 DDL 686
++
Sbjct: 163 QEV 165
>04_04_0881 + 29055724-29059197
Length = 1157
Score = 28.7 bits (61), Expect = 6.6
Identities = 20/47 (42%), Positives = 23/47 (48%)
Frame = +3
Query: 381 IERLYSRFTSLDKNDCGTLSREDFLRIPELAINPLSERIVQSFFAES 521
+E+L R SL +LSR LR L N LS I QSF A S
Sbjct: 104 LEKLSLRSNSLSGTIPASLSRISSLRAVYLQYNSLSGPIPQSFLANS 150
>08_02_1240 +
25504789-25504794,25505421-25505555,25505854-25505964,
25506091-25506183,25506264-25506884,25506970-25507143,
25507239-25507464,25507560-25507651,25507744-25507842,
25507936-25507984,25508071-25508124,25508312-25508484,
25508561-25508632,25508713-25508808,25509032-25509048,
25509704-25509875,25509973-25510071,25510381-25510484,
25510940-25511126,25511212-25511220
Length = 862
Score = 28.3 bits (60), Expect = 8.7
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +3
Query: 354 EETGFTPNQIERLYSRFTSLDKNDCGTLSREDFLRIPELAINPLSERIV 500
EE NQ + + FTS K + T+ +D L IP NP+++ +
Sbjct: 465 EENNDDVNQAVKKNNNFTSSPKGNSKTILDDDKLPIPNEEFNPVNKSTI 513
>02_05_0340 +
28105222-28105960,28106844-28106987,28107083-28107235,
28107418-28107533,28107819-28107986,28108792-28109016,
28110445-28110483,28110497-28110592
Length = 559
Score = 28.3 bits (60), Expect = 8.7
Identities = 23/103 (22%), Positives = 45/103 (43%)
Frame = +3
Query: 378 QIERLYSRFTSLDKNDCGTLSREDFLRIPELAINPLSERIVQSFFAESHDDRVNFLQFMR 557
+I L F ++D ++ G ++ ++ + L + ++ + D + ++
Sbjct: 394 EIAGLKEMFKAMDTDNSGAITYDELKEGMRKYGSTLKDTEIRDLMEAADVDNSGTIDYIE 453
Query: 558 VLAXFXPIKXNRENXLXCREEKLRFAFSMYDLDXDGXISXDDL 686
+A + N L REE L AFS +D D G I+ D+L
Sbjct: 454 FIAATLHL-----NKLE-REEHLVAAFSYFDKDGSGYITVDEL 490
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,696,122
Number of Sequences: 37544
Number of extensions: 273000
Number of successful extensions: 419
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 408
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 418
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2503236492
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -