Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP08_F_H22
         (886 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    23   3.7  
AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    23   3.7  
AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    23   4.9  
DQ325133-1|ABD14147.1|  181|Apis mellifera complementary sex det...    22   6.5  
DQ325075-1|ABD14089.1|  181|Apis mellifera complementary sex det...    22   6.5  
DQ325074-1|ABD14088.1|  181|Apis mellifera complementary sex det...    22   6.5  
DQ325073-1|ABD14087.1|  181|Apis mellifera complementary sex det...    22   6.5  
DQ325072-1|ABD14086.1|  181|Apis mellifera complementary sex det...    22   6.5  
DQ325071-1|ABD14085.1|  181|Apis mellifera complementary sex det...    22   6.5  
DQ325070-1|ABD14084.1|  181|Apis mellifera complementary sex det...    22   6.5  
DQ325069-1|ABD14083.1|  181|Apis mellifera complementary sex det...    22   6.5  
DQ325068-1|ABD14082.1|  181|Apis mellifera complementary sex det...    22   6.5  
AY569696-1|AAS86649.1|  414|Apis mellifera complementary sex det...    22   6.5  
AY569695-1|AAS86648.1|  414|Apis mellifera complementary sex det...    22   6.5  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          22   8.6  

>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -2

Query: 684 GHLWIXYHHXPDH 646
           GH+ I Y H PDH
Sbjct: 368 GHVAISYIHDPDH 380


>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +3

Query: 105 FNFFTVISNGXVIYISC 155
           F F  ++ NG VI+I C
Sbjct: 58  FTFLALLGNGLVIWIFC 74


>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 17/54 (31%), Positives = 26/54 (48%)
 Frame = +3

Query: 345 QIQEETGFTPNQIERLYSRFTSLDKNDCGTLSREDFLRIPELAINPLSERIVQS 506
           ++QEE  F P++I +L      L KN   TL     L      ++ L+ R+ QS
Sbjct: 265 KMQEEKIFEPHRIPQLQEVSEFLKKNTGFTLRPAAGLLTSRDFLSSLAFRVFQS 318


>DQ325133-1|ABD14147.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 144 YISCYKNFEKHNYH 185
           Y + Y N+ KHNY+
Sbjct: 94  YNNNYNNYNKHNYN 107


>DQ325075-1|ABD14089.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 144 YISCYKNFEKHNYH 185
           Y + Y N+ KHNY+
Sbjct: 94  YNNNYNNYNKHNYN 107


>DQ325074-1|ABD14088.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 144 YISCYKNFEKHNYH 185
           Y + Y N+ KHNY+
Sbjct: 94  YNNNYNNYNKHNYN 107


>DQ325073-1|ABD14087.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 144 YISCYKNFEKHNYH 185
           Y + Y N+ KHNY+
Sbjct: 94  YNNNYNNYNKHNYN 107


>DQ325072-1|ABD14086.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 144 YISCYKNFEKHNYH 185
           Y + Y N+ KHNY+
Sbjct: 94  YNNNYNNYNKHNYN 107


>DQ325071-1|ABD14085.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 144 YISCYKNFEKHNYH 185
           Y + Y N+ KHNY+
Sbjct: 94  YNNNYNNYNKHNYN 107


>DQ325070-1|ABD14084.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 144 YISCYKNFEKHNYH 185
           Y + Y N+ KHNY+
Sbjct: 94  YNNNYNNYNKHNYN 107


>DQ325069-1|ABD14083.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 144 YISCYKNFEKHNYH 185
           Y + Y N+ KHNY+
Sbjct: 94  YNNNYNNYNKHNYN 107


>DQ325068-1|ABD14082.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 144 YISCYKNFEKHNYH 185
           Y + Y N+ KHNY+
Sbjct: 94  YNNNYNNYNKHNYN 107


>AY569696-1|AAS86649.1|  414|Apis mellifera complementary sex
           determiner protein.
          Length = 414

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 144 YISCYKNFEKHNYH 185
           Y + Y N+ KHNY+
Sbjct: 327 YNNNYNNYNKHNYN 340


>AY569695-1|AAS86648.1|  414|Apis mellifera complementary sex
           determiner protein.
          Length = 414

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 144 YISCYKNFEKHNYH 185
           Y + Y N+ KHNY+
Sbjct: 327 YNNNYNNYNKHNYN 340


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +1

Query: 499 CNXSLLKATMTELTSCSS 552
           CN + LKA    L++CSS
Sbjct: 42  CNEASLKAHKVVLSACSS 59


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,016
Number of Sequences: 438
Number of extensions: 3434
Number of successful extensions: 17
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28766349
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)