Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP08_F_H20
         (886 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_04_0129 + 17520753-17520842,17521651-17521741,17521887-175220...    81   1e-15

>03_04_0129 +
           17520753-17520842,17521651-17521741,17521887-17522070,
           17522149-17522224
          Length = 146

 Score = 81.0 bits (191), Expect = 1e-15
 Identities = 33/53 (62%), Positives = 44/53 (83%)
 Frame = +3

Query: 126 VKTVAAHLKKTGKVKVPEHMDLVKXARFKELAPYDPDWFYVRCAAILRHIYIR 284
           VK  +AHLK++GK+++PE +D+VK ARFKEL PYDPDW+Y R A+I R IY+R
Sbjct: 18  VKAYSAHLKRSGKMELPEWVDIVKTARFKELPPYDPDWYYTRAASIARKIYLR 70



 Score = 78.6 bits (185), Expect = 6e-15
 Identities = 33/64 (51%), Positives = 48/64 (75%)
 Frame = +1

Query: 295 GVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRD 474
           GV    KI+GGR+RNG  P HFC+SSG+I+R  LQ L+ + +++    GGR++T+QGRRD
Sbjct: 74  GVGGFQKIYGGRQRNGSRPPHFCKSSGAISRNILQQLQKMGIIDVDPKGGRLITSQGRRD 133

Query: 475 LDRI 486
           LD++
Sbjct: 134 LDQV 137


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,079,555
Number of Sequences: 37544
Number of extensions: 266817
Number of successful extensions: 640
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 630
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 640
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2503236492
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)