Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP08_F_H20
(886 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M81757-1|AAA89070.1| 145|Homo sapiens S19 ribosomal protein pro... 97 1e-19
BC018616-1|AAH18616.1| 145|Homo sapiens ribosomal protein S19 p... 97 1e-19
BC017386-1|AAH17386.1| 157|Homo sapiens ribosomal protein S19 p... 97 1e-19
BC007615-1|AAH07615.1| 145|Homo sapiens ribosomal protein S19 p... 97 1e-19
BC000023-1|AAH00023.1| 145|Homo sapiens ribosomal protein S19 p... 97 1e-19
AF092907-1|AAD13668.1| 145|Homo sapiens ribosomal protein S19 p... 97 1e-19
AL163302-1|CAB90481.1| 211|Homo sapiens PRED59 protein. 32 3.2
>M81757-1|AAA89070.1| 145|Homo sapiens S19 ribosomal protein
protein.
Length = 145
Score = 96.7 bits (230), Expect = 1e-19
Identities = 45/64 (70%), Positives = 54/64 (84%)
Frame = +1
Query: 295 GVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRD 474
GV ++TKI+GGR+RNGV PSHF R S S+AR+ LQ+LE LK+VEK QDGGR LT QG+RD
Sbjct: 71 GVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRD 130
Query: 475 LDRI 486
LDRI
Sbjct: 131 LDRI 134
Score = 76.6 bits (180), Expect = 1e-13
Identities = 32/59 (54%), Positives = 45/59 (76%)
Frame = +3
Query: 108 LHKPSLVKTVAAHLKKTGKVKVPEHMDLVKXARFKELAPYDPDWFYVRCAAILRHIYIR 284
+++ V+ +AA LKK+GK+KVPE +D VK A+ KELAPYD +WFY R A+ RH+Y+R
Sbjct: 9 VNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHLYLR 67
>BC018616-1|AAH18616.1| 145|Homo sapiens ribosomal protein S19
protein.
Length = 145
Score = 96.7 bits (230), Expect = 1e-19
Identities = 45/64 (70%), Positives = 54/64 (84%)
Frame = +1
Query: 295 GVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRD 474
GV ++TKI+GGR+RNGV PSHF R S S+AR+ LQ+LE LK+VEK QDGGR LT QG+RD
Sbjct: 71 GVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRD 130
Query: 475 LDRI 486
LDRI
Sbjct: 131 LDRI 134
Score = 76.6 bits (180), Expect = 1e-13
Identities = 32/59 (54%), Positives = 45/59 (76%)
Frame = +3
Query: 108 LHKPSLVKTVAAHLKKTGKVKVPEHMDLVKXARFKELAPYDPDWFYVRCAAILRHIYIR 284
+++ V+ +AA LKK+GK+KVPE +D VK A+ KELAPYD +WFY R A+ RH+Y+R
Sbjct: 9 VNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHLYLR 67
>BC017386-1|AAH17386.1| 157|Homo sapiens ribosomal protein S19
protein.
Length = 157
Score = 96.7 bits (230), Expect = 1e-19
Identities = 45/64 (70%), Positives = 54/64 (84%)
Frame = +1
Query: 295 GVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRD 474
GV ++TKI+GGR+RNGV PSHF R S S+AR+ LQ+LE LK+VEK QDGGR LT QG+RD
Sbjct: 83 GVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRD 142
Query: 475 LDRI 486
LDRI
Sbjct: 143 LDRI 146
Score = 76.6 bits (180), Expect = 1e-13
Identities = 32/59 (54%), Positives = 45/59 (76%)
Frame = +3
Query: 108 LHKPSLVKTVAAHLKKTGKVKVPEHMDLVKXARFKELAPYDPDWFYVRCAAILRHIYIR 284
+++ V+ +AA LKK+GK+KVPE +D VK A+ KELAPYD +WFY R A+ RH+Y+R
Sbjct: 21 VNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHLYLR 79
>BC007615-1|AAH07615.1| 145|Homo sapiens ribosomal protein S19
protein.
Length = 145
Score = 96.7 bits (230), Expect = 1e-19
Identities = 45/64 (70%), Positives = 54/64 (84%)
Frame = +1
Query: 295 GVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRD 474
GV ++TKI+GGR+RNGV PSHF R S S+AR+ LQ+LE LK+VEK QDGGR LT QG+RD
Sbjct: 71 GVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRD 130
Query: 475 LDRI 486
LDRI
Sbjct: 131 LDRI 134
Score = 76.6 bits (180), Expect = 1e-13
Identities = 32/59 (54%), Positives = 45/59 (76%)
Frame = +3
Query: 108 LHKPSLVKTVAAHLKKTGKVKVPEHMDLVKXARFKELAPYDPDWFYVRCAAILRHIYIR 284
+++ V+ +AA LKK+GK+KVPE +D VK A+ KELAPYD +WFY R A+ RH+Y+R
Sbjct: 9 VNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHLYLR 67
>BC000023-1|AAH00023.1| 145|Homo sapiens ribosomal protein S19
protein.
Length = 145
Score = 96.7 bits (230), Expect = 1e-19
Identities = 45/64 (70%), Positives = 54/64 (84%)
Frame = +1
Query: 295 GVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRD 474
GV ++TKI+GGR+RNGV PSHF R S S+AR+ LQ+LE LK+VEK QDGGR LT QG+RD
Sbjct: 71 GVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRD 130
Query: 475 LDRI 486
LDRI
Sbjct: 131 LDRI 134
Score = 76.6 bits (180), Expect = 1e-13
Identities = 32/59 (54%), Positives = 45/59 (76%)
Frame = +3
Query: 108 LHKPSLVKTVAAHLKKTGKVKVPEHMDLVKXARFKELAPYDPDWFYVRCAAILRHIYIR 284
+++ V+ +AA LKK+GK+KVPE +D VK A+ KELAPYD +WFY R A+ RH+Y+R
Sbjct: 9 VNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHLYLR 67
>AF092907-1|AAD13668.1| 145|Homo sapiens ribosomal protein S19
protein.
Length = 145
Score = 96.7 bits (230), Expect = 1e-19
Identities = 45/64 (70%), Positives = 54/64 (84%)
Frame = +1
Query: 295 GVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRD 474
GV ++TKI+GGR+RNGV PSHF R S S+AR+ LQ+LE LK+VEK QDGGR LT QG+RD
Sbjct: 71 GVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRD 130
Query: 475 LDRI 486
LDRI
Sbjct: 131 LDRI 134
Score = 76.6 bits (180), Expect = 1e-13
Identities = 32/59 (54%), Positives = 45/59 (76%)
Frame = +3
Query: 108 LHKPSLVKTVAAHLKKTGKVKVPEHMDLVKXARFKELAPYDPDWFYVRCAAILRHIYIR 284
+++ V+ +AA LKK+GK+KVPE +D VK A+ KELAPYD +WFY R A+ RH+Y+R
Sbjct: 9 VNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHLYLR 67
>AL163302-1|CAB90481.1| 211|Homo sapiens PRED59 protein.
Length = 211
Score = 31.9 bits (69), Expect = 3.2
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +2
Query: 260 HPSSYLHSLTXLESRLSPRSLVGANVMELHLHIS-AGHQAVLHARLCNR 403
H S ++SL L LSP + + EL H + GHQ +LH LC+R
Sbjct: 150 HHSFCVYSLEILWKELSPPNFIPLTNDELEFHRTVCGHQKILHG-LCHR 197
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,522,359
Number of Sequences: 237096
Number of extensions: 1545692
Number of successful extensions: 3015
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2824
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3015
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11326166088
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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