Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP08_F_H16
         (904 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75714-1|CAB00058.1|  194|Caenorhabditis elegans Hypothetical pr...   149   2e-36
Z48582-3|CAA88464.1|  401|Caenorhabditis elegans Hypothetical pr...    28   7.9  

>Z75714-1|CAB00058.1|  194|Caenorhabditis elegans Hypothetical
           protein ZC434.2 protein.
          Length = 194

 Score =  149 bits (362), Expect = 2e-36
 Identities = 71/130 (54%), Positives = 97/130 (74%), Gaps = 1/130 (0%)
 Frame = +3

Query: 102 QLIKARGAEADSFEPSISQALVELETNSDLKAQLRXLYITKAKEIELHNKKSIIIYVPMP 281
           +L+K+ G      E  +SQAL++LETN D+++QL+ LYI   KE+EL NK +IIIYVP+P
Sbjct: 7   KLLKSDGKVVSEIEKQVSQALIDLETNDDVQSQLKELYIVGVKEVELGNKSAIIIYVPVP 66

Query: 282 KLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRV-ANKQKRPRSRTLTSVY 458
           +LKAF KI   LVRELEKKF G+ ++ +  R+ILPKP   ++    KQKRPRSRTLT+V+
Sbjct: 67  QLKAFHKIHPALVRELEKKFGGRDILILAKRRILPKPQRGSKARPQKQKRPRSRTLTAVH 126

Query: 459 DAILEDLVFP 488
           DA L++LV+P
Sbjct: 127 DAWLDELVYP 136



 Score = 58.4 bits (135), Expect = 6e-09
 Identities = 26/58 (44%), Positives = 36/58 (62%)
 Frame = +1

Query: 490 AEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQFCIQEANGTRSYLRVPRTLF 663
           AE+VG+RIRVKLDG ++ KVHLDK+ QT + HK+  F    ++  G       P  +F
Sbjct: 137 AEVVGRRIRVKLDGKKVYKVHLDKSHQTNVGHKIGVFASVYRKLTGKDVTFEFPDPIF 194


>Z48582-3|CAA88464.1|  401|Caenorhabditis elegans Hypothetical
           protein F27E5.1 protein.
          Length = 401

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 18/70 (25%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
 Frame = +3

Query: 132 DSFEPSISQALVELETNSDLKAQLRXLYITKAKEIELHNKKSIIIY--VPMPKLKAFQKI 305
           D ++P+ S+ ++  + N DL  + R   I KA + E+H    ++ Y    +P + A++ I
Sbjct: 40  DIYDPAQSEKVLWFDVNLDLPPRQRFQQIAKAYKKEIHAVFDVLNYFLTIIPGVNAWELI 99

Query: 306 QIRLVRELEK 335
                  L+K
Sbjct: 100 GNMTASALDK 109


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,261,666
Number of Sequences: 27780
Number of extensions: 278098
Number of successful extensions: 757
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 733
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 755
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2297313942
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)