Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP08_F_H13
(884 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X63527-1|CAA45090.1| 196|Homo sapiens ribosomal protein L19 pro... 220 5e-57
S56985-1|AAB25672.1| 196|Homo sapiens ribosomal protein L19 pro... 220 5e-57
BX537435-1|CAD97677.1| 205|Homo sapiens hypothetical protein pr... 220 5e-57
BC095445-1|AAH95445.1| 196|Homo sapiens ribosomal protein L19 p... 220 5e-57
BC066315-1|AAH66315.1| 196|Homo sapiens ribosomal protein L19 p... 220 5e-57
BC062709-1|AAH62709.1| 196|Homo sapiens ribosomal protein L19 p... 220 5e-57
BC013016-1|AAH13016.1| 196|Homo sapiens ribosomal protein L19 p... 220 5e-57
BC000530-1|AAH00530.1| 196|Homo sapiens ribosomal protein L19 p... 220 5e-57
AK223082-1|BAD96802.1| 196|Homo sapiens ribosomal protein L19 v... 220 5e-57
AY157980-1|AAN76335.1| 173|Homo sapiens ribosomal protein L19 p... 195 2e-49
>X63527-1|CAA45090.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 220 bits (538), Expect = 5e-57
Identities = 103/155 (66%), Positives = 119/155 (76%)
Frame = +2
Query: 104 LKLQKXLAASVMRCGKKXVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARV 283
L+LQK LA+SV+RCGKK VWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSRAR
Sbjct: 4 LRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSRARC 63
Query: 284 RKNTEARRKGRHCGFGKRRGTANARMPQKEXXXXXXXXXXXXXXXYXTAKKIDRHLYHSL 463
RKNT ARRKGRH G GKR+GTANARMP+K Y +KKIDRH+YHSL
Sbjct: 64 RKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSL 123
Query: 464 YMKAKGNVFXNKRVLMEYXHRKKAXKAXTXMLSDQ 568
Y+K KGNVF NKR+LME+ H+ KA KA +L+DQ
Sbjct: 124 YLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQ 158
>S56985-1|AAB25672.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 220 bits (538), Expect = 5e-57
Identities = 103/155 (66%), Positives = 119/155 (76%)
Frame = +2
Query: 104 LKLQKXLAASVMRCGKKXVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARV 283
L+LQK LA+SV+RCGKK VWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSRAR
Sbjct: 4 LRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSRARC 63
Query: 284 RKNTEARRKGRHCGFGKRRGTANARMPQKEXXXXXXXXXXXXXXXYXTAKKIDRHLYHSL 463
RKNT ARRKGRH G GKR+GTANARMP+K Y +KKIDRH+YHSL
Sbjct: 64 RKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSL 123
Query: 464 YMKAKGNVFXNKRVLMEYXHRKKAXKAXTXMLSDQ 568
Y+K KGNVF NKR+LME+ H+ KA KA +L+DQ
Sbjct: 124 YLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQ 158
>BX537435-1|CAD97677.1| 205|Homo sapiens hypothetical protein
protein.
Length = 205
Score = 220 bits (538), Expect = 5e-57
Identities = 103/155 (66%), Positives = 119/155 (76%)
Frame = +2
Query: 104 LKLQKXLAASVMRCGKKXVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARV 283
L+LQK LA+SV+RCGKK VWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSRAR
Sbjct: 13 LRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSRARC 72
Query: 284 RKNTEARRKGRHCGFGKRRGTANARMPQKEXXXXXXXXXXXXXXXYXTAKKIDRHLYHSL 463
RKNT ARRKGRH G GKR+GTANARMP+K Y +KKIDRH+YHSL
Sbjct: 73 RKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSL 132
Query: 464 YMKAKGNVFXNKRVLMEYXHRKKAXKAXTXMLSDQ 568
Y+K KGNVF NKR+LME+ H+ KA KA +L+DQ
Sbjct: 133 YLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQ 167
>BC095445-1|AAH95445.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 220 bits (538), Expect = 5e-57
Identities = 103/155 (66%), Positives = 119/155 (76%)
Frame = +2
Query: 104 LKLQKXLAASVMRCGKKXVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARV 283
L+LQK LA+SV+RCGKK VWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSRAR
Sbjct: 4 LRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSRARC 63
Query: 284 RKNTEARRKGRHCGFGKRRGTANARMPQKEXXXXXXXXXXXXXXXYXTAKKIDRHLYHSL 463
RKNT ARRKGRH G GKR+GTANARMP+K Y +KKIDRH+YHSL
Sbjct: 64 RKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSL 123
Query: 464 YMKAKGNVFXNKRVLMEYXHRKKAXKAXTXMLSDQ 568
Y+K KGNVF NKR+LME+ H+ KA KA +L+DQ
Sbjct: 124 YLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQ 158
>BC066315-1|AAH66315.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 220 bits (538), Expect = 5e-57
Identities = 103/155 (66%), Positives = 119/155 (76%)
Frame = +2
Query: 104 LKLQKXLAASVMRCGKKXVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARV 283
L+LQK LA+SV+RCGKK VWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSRAR
Sbjct: 4 LRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSRARC 63
Query: 284 RKNTEARRKGRHCGFGKRRGTANARMPQKEXXXXXXXXXXXXXXXYXTAKKIDRHLYHSL 463
RKNT ARRKGRH G GKR+GTANARMP+K Y +KKIDRH+YHSL
Sbjct: 64 RKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSL 123
Query: 464 YMKAKGNVFXNKRVLMEYXHRKKAXKAXTXMLSDQ 568
Y+K KGNVF NKR+LME+ H+ KA KA +L+DQ
Sbjct: 124 YLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQ 158
>BC062709-1|AAH62709.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 220 bits (538), Expect = 5e-57
Identities = 103/155 (66%), Positives = 119/155 (76%)
Frame = +2
Query: 104 LKLQKXLAASVMRCGKKXVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARV 283
L+LQK LA+SV+RCGKK VWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSRAR
Sbjct: 4 LRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSRARC 63
Query: 284 RKNTEARRKGRHCGFGKRRGTANARMPQKEXXXXXXXXXXXXXXXYXTAKKIDRHLYHSL 463
RKNT ARRKGRH G GKR+GTANARMP+K Y +KKIDRH+YHSL
Sbjct: 64 RKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSL 123
Query: 464 YMKAKGNVFXNKRVLMEYXHRKKAXKAXTXMLSDQ 568
Y+K KGNVF NKR+LME+ H+ KA KA +L+DQ
Sbjct: 124 YLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQ 158
>BC013016-1|AAH13016.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 220 bits (538), Expect = 5e-57
Identities = 103/155 (66%), Positives = 119/155 (76%)
Frame = +2
Query: 104 LKLQKXLAASVMRCGKKXVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARV 283
L+LQK LA+SV+RCGKK VWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSRAR
Sbjct: 4 LRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSRARC 63
Query: 284 RKNTEARRKGRHCGFGKRRGTANARMPQKEXXXXXXXXXXXXXXXYXTAKKIDRHLYHSL 463
RKNT ARRKGRH G GKR+GTANARMP+K Y +KKIDRH+YHSL
Sbjct: 64 RKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSL 123
Query: 464 YMKAKGNVFXNKRVLMEYXHRKKAXKAXTXMLSDQ 568
Y+K KGNVF NKR+LME+ H+ KA KA +L+DQ
Sbjct: 124 YLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQ 158
>BC000530-1|AAH00530.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 220 bits (538), Expect = 5e-57
Identities = 103/155 (66%), Positives = 119/155 (76%)
Frame = +2
Query: 104 LKLQKXLAASVMRCGKKXVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARV 283
L+LQK LA+SV+RCGKK VWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSRAR
Sbjct: 4 LRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSRARC 63
Query: 284 RKNTEARRKGRHCGFGKRRGTANARMPQKEXXXXXXXXXXXXXXXYXTAKKIDRHLYHSL 463
RKNT ARRKGRH G GKR+GTANARMP+K Y +KKIDRH+YHSL
Sbjct: 64 RKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSL 123
Query: 464 YMKAKGNVFXNKRVLMEYXHRKKAXKAXTXMLSDQ 568
Y+K KGNVF NKR+LME+ H+ KA KA +L+DQ
Sbjct: 124 YLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQ 158
>AK223082-1|BAD96802.1| 196|Homo sapiens ribosomal protein L19
variant protein.
Length = 196
Score = 220 bits (538), Expect = 5e-57
Identities = 103/155 (66%), Positives = 119/155 (76%)
Frame = +2
Query: 104 LKLQKXLAASVMRCGKKXVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARV 283
L+LQK LA+SV+RCGKK VWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSRAR
Sbjct: 4 LRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSRARC 63
Query: 284 RKNTEARRKGRHCGFGKRRGTANARMPQKEXXXXXXXXXXXXXXXYXTAKKIDRHLYHSL 463
RKNT ARRKGRH G GKR+GTANARMP+K Y +KKIDRH+YHSL
Sbjct: 64 RKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSL 123
Query: 464 YMKAKGNVFXNKRVLMEYXHRKKAXKAXTXMLSDQ 568
Y+K KGNVF NKR+LME+ H+ KA KA +L+DQ
Sbjct: 124 YLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQ 158
>AY157980-1|AAN76335.1| 173|Homo sapiens ribosomal protein L19
protein.
Length = 173
Score = 195 bits (475), Expect = 2e-49
Identities = 91/139 (65%), Positives = 104/139 (74%)
Frame = +2
Query: 152 KXVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKGRHCGFG 331
K VWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSRAR RKNT ARRKGRH G G
Sbjct: 1 KKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIG 60
Query: 332 KRRGTANARMPQKEXXXXXXXXXXXXXXXYXTAKKIDRHLYHSLYMKAKGNVFXNKRVLM 511
KR+GTANARMP+K Y +KKIDRH+YHSLY+K KGNVF NKR+LM
Sbjct: 61 KRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNVFKNKRILM 120
Query: 512 EYXHRKKAXKAXTXMLSDQ 568
E+ H+ KA KA +L+DQ
Sbjct: 121 EHIHKLKADKARKKLLADQ 139
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,053,334
Number of Sequences: 237096
Number of extensions: 2182021
Number of successful extensions: 3673
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3511
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3663
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11326166088
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -