BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP08_F_H13
(884 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT024264-1|ABC86326.1| 208|Drosophila melanogaster IP15818p pro... 244 2e-64
AY061217-1|AAL28765.2| 221|Drosophila melanogaster LD16326p pro... 244 2e-64
AE013599-4000|AAS64772.1| 203|Drosophila melanogaster CG2746-PB... 244 2e-64
AE013599-3999|AAF47305.1| 203|Drosophila melanogaster CG2746-PA... 244 2e-64
X74776-1|CAA52784.1| 203|Drosophila melanogaster ribosomal prot... 241 1e-63
L02106-2|AAA99872.1| 465|Drosophila melanogaster ribonucleoprot... 32 0.92
L02106-1|AAA99873.1| 471|Drosophila melanogaster ribonucleoprot... 32 0.92
BT010254-1|AAQ23572.1| 196|Drosophila melanogaster RE34656p pro... 32 0.92
BT001320-1|AAN71075.1| 434|Drosophila melanogaster AT15526p pro... 32 0.92
AE014297-4014|AAX53003.1| 434|Drosophila melanogaster CG6354-PE... 32 0.92
AE014297-4013|AAX53002.1| 434|Drosophila melanogaster CG6354-PD... 32 0.92
AE014297-4012|AAX53001.1| 471|Drosophila melanogaster CG6354-PI... 32 0.92
AE014297-4011|AAX53000.1| 471|Drosophila melanogaster CG6354-PH... 32 0.92
AE014297-4010|AAX52999.1| 471|Drosophila melanogaster CG6354-PF... 32 0.92
AE014297-4009|AAF56633.1| 471|Drosophila melanogaster CG6354-PB... 32 0.92
AE014297-4008|AAX52998.1| 465|Drosophila melanogaster CG6354-PG... 32 0.92
AE014297-4007|AAX52997.1| 465|Drosophila melanogaster CG6354-PC... 32 0.92
AE014297-4006|AAN14092.1| 465|Drosophila melanogaster CG6354-PA... 32 0.92
>BT024264-1|ABC86326.1| 208|Drosophila melanogaster IP15818p
protein.
Length = 208
Score = 244 bits (596), Expect = 2e-64
Identities = 116/155 (74%), Positives = 124/155 (80%)
Frame = +2
Query: 104 LKLQKXLAASVMRCGKKXVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARV 283
LKLQK LAASV+RCGKK VWLDPNEINEIANTNSRQNIRK+IKDGL+IKKPV VHSR RV
Sbjct: 9 LKLQKRLAASVLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSRYRV 68
Query: 284 RKNTEARRKGRHCGFGKRRGTANARMPQKEXXXXXXXXXXXXXXXYXTAKKIDRHLYHSL 463
RKNTEARRKGRHCGFGKR+GTANARMP K Y +KKIDRHLYH L
Sbjct: 69 RKNTEARRKGRHCGFGKRKGTANARMPTKLLWMQRQRVLRRLLKKYRDSKKIDRHLYHDL 128
Query: 464 YMKAKGNVFXNKRVLMEYXHRKKAXKAXTXMLSDQ 568
YMK KGNVF NKRVLMEY H+KKA K + ML+DQ
Sbjct: 129 YMKCKGNVFKNKRVLMEYIHKKKAEKQRSKMLADQ 163
>AY061217-1|AAL28765.2| 221|Drosophila melanogaster LD16326p
protein.
Length = 221
Score = 244 bits (596), Expect = 2e-64
Identities = 116/155 (74%), Positives = 124/155 (80%)
Frame = +2
Query: 104 LKLQKXLAASVMRCGKKXVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARV 283
LKLQK LAASV+RCGKK VWLDPNEINEIANTNSRQNIRK+IKDGL+IKKPV VHSR RV
Sbjct: 22 LKLQKRLAASVLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSRYRV 81
Query: 284 RKNTEARRKGRHCGFGKRRGTANARMPQKEXXXXXXXXXXXXXXXYXTAKKIDRHLYHSL 463
RKNTEARRKGRHCGFGKR+GTANARMP K Y +KKIDRHLYH L
Sbjct: 82 RKNTEARRKGRHCGFGKRKGTANARMPTKLLWMQRQRVLRRLLKKYRDSKKIDRHLYHDL 141
Query: 464 YMKAKGNVFXNKRVLMEYXHRKKAXKAXTXMLSDQ 568
YMK KGNVF NKRVLMEY H+KKA K + ML+DQ
Sbjct: 142 YMKCKGNVFKNKRVLMEYIHKKKAEKQRSKMLADQ 176
>AE013599-4000|AAS64772.1| 203|Drosophila melanogaster CG2746-PB,
isoform B protein.
Length = 203
Score = 244 bits (596), Expect = 2e-64
Identities = 116/155 (74%), Positives = 124/155 (80%)
Frame = +2
Query: 104 LKLQKXLAASVMRCGKKXVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARV 283
LKLQK LAASV+RCGKK VWLDPNEINEIANTNSRQNIRK+IKDGL+IKKPV VHSR RV
Sbjct: 4 LKLQKRLAASVLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSRYRV 63
Query: 284 RKNTEARRKGRHCGFGKRRGTANARMPQKEXXXXXXXXXXXXXXXYXTAKKIDRHLYHSL 463
RKNTEARRKGRHCGFGKR+GTANARMP K Y +KKIDRHLYH L
Sbjct: 64 RKNTEARRKGRHCGFGKRKGTANARMPTKLLWMQRQRVLRRLLKKYRDSKKIDRHLYHDL 123
Query: 464 YMKAKGNVFXNKRVLMEYXHRKKAXKAXTXMLSDQ 568
YMK KGNVF NKRVLMEY H+KKA K + ML+DQ
Sbjct: 124 YMKCKGNVFKNKRVLMEYIHKKKAEKQRSKMLADQ 158
>AE013599-3999|AAF47305.1| 203|Drosophila melanogaster CG2746-PA,
isoform A protein.
Length = 203
Score = 244 bits (596), Expect = 2e-64
Identities = 116/155 (74%), Positives = 124/155 (80%)
Frame = +2
Query: 104 LKLQKXLAASVMRCGKKXVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARV 283
LKLQK LAASV+RCGKK VWLDPNEINEIANTNSRQNIRK+IKDGL+IKKPV VHSR RV
Sbjct: 4 LKLQKRLAASVLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSRYRV 63
Query: 284 RKNTEARRKGRHCGFGKRRGTANARMPQKEXXXXXXXXXXXXXXXYXTAKKIDRHLYHSL 463
RKNTEARRKGRHCGFGKR+GTANARMP K Y +KKIDRHLYH L
Sbjct: 64 RKNTEARRKGRHCGFGKRKGTANARMPTKLLWMQRQRVLRRLLKKYRDSKKIDRHLYHDL 123
Query: 464 YMKAKGNVFXNKRVLMEYXHRKKAXKAXTXMLSDQ 568
YMK KGNVF NKRVLMEY H+KKA K + ML+DQ
Sbjct: 124 YMKCKGNVFKNKRVLMEYIHKKKAEKQRSKMLADQ 158
>X74776-1|CAA52784.1| 203|Drosophila melanogaster ribosomal protein
L19 protein.
Length = 203
Score = 241 bits (589), Expect = 1e-63
Identities = 115/155 (74%), Positives = 123/155 (79%)
Frame = +2
Query: 104 LKLQKXLAASVMRCGKKXVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARV 283
LKLQK LAASV+RCGKK VWLDPNEINEIANTNSRQNIRK+IKDGL+IKKPV VHSR RV
Sbjct: 4 LKLQKRLAASVLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSRYRV 63
Query: 284 RKNTEARRKGRHCGFGKRRGTANARMPQKEXXXXXXXXXXXXXXXYXTAKKIDRHLYHSL 463
RKNTEARRK RHCGFGKR+GTANARMP K Y +KKIDRHLYH L
Sbjct: 64 RKNTEARRKDRHCGFGKRKGTANARMPTKLLWMQRQPFCRRLLKKYRDSKKIDRHLYHDL 123
Query: 464 YMKAKGNVFXNKRVLMEYXHRKKAXKAXTXMLSDQ 568
YMK KGNVF NKRVLMEY H+KKA K + ML+DQ
Sbjct: 124 YMKCKGNVFKNKRVLMEYIHKKKAEKQRSKMLADQ 158
>L02106-2|AAA99872.1| 465|Drosophila melanogaster ribonucleoprotein
protein.
Length = 465
Score = 32.3 bits (70), Expect = 0.92
Identities = 20/57 (35%), Positives = 26/57 (45%)
Frame = -1
Query: 641 PPXWRQYVPRGACVPPLLYCGGPQPGR*AXSSWPXQPSSCGXTP*AHACSXTHYPSP 471
PP +Q P GA VPP + GP P A +W P G P +H + P+P
Sbjct: 330 PPPVQQVPPVGA-VPPPMGHNGPPPT--APGNWNMPPPVPGAAPPSHQQQSSQQPTP 383
>L02106-1|AAA99873.1| 471|Drosophila melanogaster ribonucleoprotein
protein.
Length = 471
Score = 32.3 bits (70), Expect = 0.92
Identities = 20/57 (35%), Positives = 26/57 (45%)
Frame = -1
Query: 641 PPXWRQYVPRGACVPPLLYCGGPQPGR*AXSSWPXQPSSCGXTP*AHACSXTHYPSP 471
PP +Q P GA VPP + GP P A +W P G P +H + P+P
Sbjct: 330 PPPVQQVPPVGA-VPPPMGHNGPPPT--APGNWNMPPPVPGAAPPSHQQQSSQQPTP 383
>BT010254-1|AAQ23572.1| 196|Drosophila melanogaster RE34656p
protein.
Length = 196
Score = 32.3 bits (70), Expect = 0.92
Identities = 20/57 (35%), Positives = 26/57 (45%)
Frame = -1
Query: 641 PPXWRQYVPRGACVPPLLYCGGPQPGR*AXSSWPXQPSSCGXTP*AHACSXTHYPSP 471
PP +Q P GA VPP + GP P A +W P G P +H + P+P
Sbjct: 92 PPPVQQVPPVGA-VPPPMGHNGPPPT--APGNWNMPPPVPGAAPPSHQQQSSQQPTP 145
>BT001320-1|AAN71075.1| 434|Drosophila melanogaster AT15526p
protein.
Length = 434
Score = 32.3 bits (70), Expect = 0.92
Identities = 20/57 (35%), Positives = 26/57 (45%)
Frame = -1
Query: 641 PPXWRQYVPRGACVPPLLYCGGPQPGR*AXSSWPXQPSSCGXTP*AHACSXTHYPSP 471
PP +Q P GA VPP + GP P A +W P G P +H + P+P
Sbjct: 330 PPPVQQVPPVGA-VPPPMGHNGPPPT--APGNWNMPPPVPGAAPPSHQQQSSQQPTP 383
>AE014297-4014|AAX53003.1| 434|Drosophila melanogaster CG6354-PE,
isoform E protein.
Length = 434
Score = 32.3 bits (70), Expect = 0.92
Identities = 20/57 (35%), Positives = 26/57 (45%)
Frame = -1
Query: 641 PPXWRQYVPRGACVPPLLYCGGPQPGR*AXSSWPXQPSSCGXTP*AHACSXTHYPSP 471
PP +Q P GA VPP + GP P A +W P G P +H + P+P
Sbjct: 330 PPPVQQVPPVGA-VPPPMGHNGPPPT--APGNWNMPPPVPGAAPPSHQQQSSQQPTP 383
>AE014297-4013|AAX53002.1| 434|Drosophila melanogaster CG6354-PD,
isoform D protein.
Length = 434
Score = 32.3 bits (70), Expect = 0.92
Identities = 20/57 (35%), Positives = 26/57 (45%)
Frame = -1
Query: 641 PPXWRQYVPRGACVPPLLYCGGPQPGR*AXSSWPXQPSSCGXTP*AHACSXTHYPSP 471
PP +Q P GA VPP + GP P A +W P G P +H + P+P
Sbjct: 330 PPPVQQVPPVGA-VPPPMGHNGPPPT--APGNWNMPPPVPGAAPPSHQQQSSQQPTP 383
>AE014297-4012|AAX53001.1| 471|Drosophila melanogaster CG6354-PI,
isoform I protein.
Length = 471
Score = 32.3 bits (70), Expect = 0.92
Identities = 20/57 (35%), Positives = 26/57 (45%)
Frame = -1
Query: 641 PPXWRQYVPRGACVPPLLYCGGPQPGR*AXSSWPXQPSSCGXTP*AHACSXTHYPSP 471
PP +Q P GA VPP + GP P A +W P G P +H + P+P
Sbjct: 330 PPPVQQVPPVGA-VPPPMGHNGPPPT--APGNWNMPPPVPGAAPPSHQQQSSQQPTP 383
>AE014297-4011|AAX53000.1| 471|Drosophila melanogaster CG6354-PH,
isoform H protein.
Length = 471
Score = 32.3 bits (70), Expect = 0.92
Identities = 20/57 (35%), Positives = 26/57 (45%)
Frame = -1
Query: 641 PPXWRQYVPRGACVPPLLYCGGPQPGR*AXSSWPXQPSSCGXTP*AHACSXTHYPSP 471
PP +Q P GA VPP + GP P A +W P G P +H + P+P
Sbjct: 330 PPPVQQVPPVGA-VPPPMGHNGPPPT--APGNWNMPPPVPGAAPPSHQQQSSQQPTP 383
>AE014297-4010|AAX52999.1| 471|Drosophila melanogaster CG6354-PF,
isoform F protein.
Length = 471
Score = 32.3 bits (70), Expect = 0.92
Identities = 20/57 (35%), Positives = 26/57 (45%)
Frame = -1
Query: 641 PPXWRQYVPRGACVPPLLYCGGPQPGR*AXSSWPXQPSSCGXTP*AHACSXTHYPSP 471
PP +Q P GA VPP + GP P A +W P G P +H + P+P
Sbjct: 330 PPPVQQVPPVGA-VPPPMGHNGPPPT--APGNWNMPPPVPGAAPPSHQQQSSQQPTP 383
>AE014297-4009|AAF56633.1| 471|Drosophila melanogaster CG6354-PB,
isoform B protein.
Length = 471
Score = 32.3 bits (70), Expect = 0.92
Identities = 20/57 (35%), Positives = 26/57 (45%)
Frame = -1
Query: 641 PPXWRQYVPRGACVPPLLYCGGPQPGR*AXSSWPXQPSSCGXTP*AHACSXTHYPSP 471
PP +Q P GA VPP + GP P A +W P G P +H + P+P
Sbjct: 330 PPPVQQVPPVGA-VPPPMGHNGPPPT--APGNWNMPPPVPGAAPPSHQQQSSQQPTP 383
>AE014297-4008|AAX52998.1| 465|Drosophila melanogaster CG6354-PG,
isoform G protein.
Length = 465
Score = 32.3 bits (70), Expect = 0.92
Identities = 20/57 (35%), Positives = 26/57 (45%)
Frame = -1
Query: 641 PPXWRQYVPRGACVPPLLYCGGPQPGR*AXSSWPXQPSSCGXTP*AHACSXTHYPSP 471
PP +Q P GA VPP + GP P A +W P G P +H + P+P
Sbjct: 330 PPPVQQVPPVGA-VPPPMGHNGPPPT--APGNWNMPPPVPGAAPPSHQQQSSQQPTP 383
>AE014297-4007|AAX52997.1| 465|Drosophila melanogaster CG6354-PC,
isoform C protein.
Length = 465
Score = 32.3 bits (70), Expect = 0.92
Identities = 20/57 (35%), Positives = 26/57 (45%)
Frame = -1
Query: 641 PPXWRQYVPRGACVPPLLYCGGPQPGR*AXSSWPXQPSSCGXTP*AHACSXTHYPSP 471
PP +Q P GA VPP + GP P A +W P G P +H + P+P
Sbjct: 330 PPPVQQVPPVGA-VPPPMGHNGPPPT--APGNWNMPPPVPGAAPPSHQQQSSQQPTP 383
>AE014297-4006|AAN14092.1| 465|Drosophila melanogaster CG6354-PA,
isoform A protein.
Length = 465
Score = 32.3 bits (70), Expect = 0.92
Identities = 20/57 (35%), Positives = 26/57 (45%)
Frame = -1
Query: 641 PPXWRQYVPRGACVPPLLYCGGPQPGR*AXSSWPXQPSSCGXTP*AHACSXTHYPSP 471
PP +Q P GA VPP + GP P A +W P G P +H + P+P
Sbjct: 330 PPPVQQVPPVGA-VPPPMGHNGPPPT--APGNWNMPPPVPGAAPPSHQQQSSQQPTP 383
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,480,682
Number of Sequences: 53049
Number of extensions: 631910
Number of successful extensions: 1304
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1255
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1293
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4311772920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -