Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP08_F_H12
         (884 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    25   4.1  
AY146758-1|AAO12073.1|  289|Anopheles gambiae odorant-binding pr...    24   7.1  
AJ618930-1|CAF02010.2|  273|Anopheles gambiae odorant-binding pr...    24   7.1  
AF393485-1|AAL60410.1|  289|Anopheles gambiae odorant binding pr...    24   7.1  

>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 24.6 bits (51), Expect = 4.1
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = +3

Query: 300 KYRMTVKILKINITKSFYTNRLQRIYIKCTVYFGQKLL 413
           K + T+K L  +    F  N  + IY+ C +Y   KLL
Sbjct: 743 KKKTTIKQL-FSAASKFQKNLKRGIYLACVLYHEDKLL 779


>AY146758-1|AAO12073.1|  289|Anopheles gambiae odorant-binding
           protein AgamOBP30 protein.
          Length = 289

 Score = 23.8 bits (49), Expect = 7.1
 Identities = 12/43 (27%), Positives = 21/43 (48%)
 Frame = +3

Query: 288 CMVRKYRMTVKILKINITKSFYTNRLQRIYIKCTVYFGQKLLR 416
           C++R Y     +L+  +    Y   L RIY++C  Y  + + R
Sbjct: 211 CVLRCY-----MLRTGLYSEQYGPNLDRIYVQCNNYANETVFR 248


>AJ618930-1|CAF02010.2|  273|Anopheles gambiae odorant-binding
           protein OBPjj83c protein.
          Length = 273

 Score = 23.8 bits (49), Expect = 7.1
 Identities = 12/43 (27%), Positives = 21/43 (48%)
 Frame = +3

Query: 288 CMVRKYRMTVKILKINITKSFYTNRLQRIYIKCTVYFGQKLLR 416
           C++R Y     +L+  +    Y   L RIY++C  Y  + + R
Sbjct: 195 CVLRCY-----MLRTGLYSEQYGPNLDRIYVQCNNYANETVFR 232


>AF393485-1|AAL60410.1|  289|Anopheles gambiae odorant binding
           protein 1 protein.
          Length = 289

 Score = 23.8 bits (49), Expect = 7.1
 Identities = 12/43 (27%), Positives = 21/43 (48%)
 Frame = +3

Query: 288 CMVRKYRMTVKILKINITKSFYTNRLQRIYIKCTVYFGQKLLR 416
           C++R Y     +L+  +    Y   L RIY++C  Y  + + R
Sbjct: 211 CVLRCY-----MLRTGLYSEQYGPNLDRIYVQCNNYANETVFR 248


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 774,564
Number of Sequences: 2352
Number of extensions: 14396
Number of successful extensions: 18
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 95093730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)