Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP08_F_H12
         (884 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT024215-1|ABC86277.1|  887|Drosophila melanogaster RE23733p pro...    95   9e-20
AE014296-1767|AAN11938.2|  887|Drosophila melanogaster CG6718-PD...    95   9e-20
AE014296-1766|AAN11937.2|  887|Drosophila melanogaster CG6718-PC...    95   9e-20
AE014296-1765|AAN11936.2|  887|Drosophila melanogaster CG6718-PB...    95   9e-20
AE014296-1764|AAF50194.3|  877|Drosophila melanogaster CG6718-PA...    95   9e-20

>BT024215-1|ABC86277.1|  887|Drosophila melanogaster RE23733p
           protein.
          Length = 887

 Score = 95.5 bits (227), Expect = 9e-20
 Identities = 46/130 (35%), Positives = 79/130 (60%), Gaps = 1/130 (0%)
 Frame = +2

Query: 275 DSMLLYGPKIPNDGKNPKDKYYEIVLYKPFTENLHQMYSLLRSETLESAEXKFIVFKERI 454
           D+MLL+ P  P +  N K   YEI+L +P +++    +SL RS   + AE +F  F +R+
Sbjct: 46  DAMLLFAP--PFNSSNEKRAVYEIILQRPTSDSNTTSFSLYRSPVQQEAEERFNAFLQRL 103

Query: 455 PIFIQITKDC-TVSTLQKLCDILSEXXSWTIAHLIAHFGLYEXLTHAAVXKHIXEIDPIT 631
           P+F+ I K+   V+ LQK CD L++  SWT++HLIA+F L + +++  + + + + D  T
Sbjct: 104 PVFVSIVKEYYNVNGLQKACDALADNPSWTLSHLIAYFNLVDYISNPKMLQCVDQADAAT 163

Query: 632 GATPLMVXLK 661
             +P  + +K
Sbjct: 164 LMSPFQLAIK 173


>AE014296-1767|AAN11938.2|  887|Drosophila melanogaster CG6718-PD,
           isoform D protein.
          Length = 887

 Score = 95.5 bits (227), Expect = 9e-20
 Identities = 46/130 (35%), Positives = 79/130 (60%), Gaps = 1/130 (0%)
 Frame = +2

Query: 275 DSMLLYGPKIPNDGKNPKDKYYEIVLYKPFTENLHQMYSLLRSETLESAEXKFIVFKERI 454
           D+MLL+ P  P +  N K   YEI+L +P +++    +SL RS   + AE +F  F +R+
Sbjct: 46  DAMLLFAP--PFNSSNEKRAVYEIILQRPTSDSNTTSFSLYRSPVQQEAEERFNAFLQRL 103

Query: 455 PIFIQITKDC-TVSTLQKLCDILSEXXSWTIAHLIAHFGLYEXLTHAAVXKHIXEIDPIT 631
           P+F+ I K+   V+ LQK CD L++  SWT++HLIA+F L + +++  + + + + D  T
Sbjct: 104 PVFVSIVKEYYNVNGLQKACDALADNPSWTLSHLIAYFNLVDYISNPKMLQCVDQADAAT 163

Query: 632 GATPLMVXLK 661
             +P  + +K
Sbjct: 164 LMSPFQLAIK 173


>AE014296-1766|AAN11937.2|  887|Drosophila melanogaster CG6718-PC,
           isoform C protein.
          Length = 887

 Score = 95.5 bits (227), Expect = 9e-20
 Identities = 46/130 (35%), Positives = 79/130 (60%), Gaps = 1/130 (0%)
 Frame = +2

Query: 275 DSMLLYGPKIPNDGKNPKDKYYEIVLYKPFTENLHQMYSLLRSETLESAEXKFIVFKERI 454
           D+MLL+ P  P +  N K   YEI+L +P +++    +SL RS   + AE +F  F +R+
Sbjct: 46  DAMLLFAP--PFNSSNEKRAVYEIILQRPTSDSNTTSFSLYRSPVQQEAEERFNAFLQRL 103

Query: 455 PIFIQITKDC-TVSTLQKLCDILSEXXSWTIAHLIAHFGLYEXLTHAAVXKHIXEIDPIT 631
           P+F+ I K+   V+ LQK CD L++  SWT++HLIA+F L + +++  + + + + D  T
Sbjct: 104 PVFVSIVKEYYNVNGLQKACDALADNPSWTLSHLIAYFNLVDYISNPKMLQCVDQADAAT 163

Query: 632 GATPLMVXLK 661
             +P  + +K
Sbjct: 164 LMSPFQLAIK 173


>AE014296-1765|AAN11936.2|  887|Drosophila melanogaster CG6718-PB,
           isoform B protein.
          Length = 887

 Score = 95.5 bits (227), Expect = 9e-20
 Identities = 46/130 (35%), Positives = 79/130 (60%), Gaps = 1/130 (0%)
 Frame = +2

Query: 275 DSMLLYGPKIPNDGKNPKDKYYEIVLYKPFTENLHQMYSLLRSETLESAEXKFIVFKERI 454
           D+MLL+ P  P +  N K   YEI+L +P +++    +SL RS   + AE +F  F +R+
Sbjct: 46  DAMLLFAP--PFNSSNEKRAVYEIILQRPTSDSNTTSFSLYRSPVQQEAEERFNAFLQRL 103

Query: 455 PIFIQITKDC-TVSTLQKLCDILSEXXSWTIAHLIAHFGLYEXLTHAAVXKHIXEIDPIT 631
           P+F+ I K+   V+ LQK CD L++  SWT++HLIA+F L + +++  + + + + D  T
Sbjct: 104 PVFVSIVKEYYNVNGLQKACDALADNPSWTLSHLIAYFNLVDYISNPKMLQCVDQADAAT 163

Query: 632 GATPLMVXLK 661
             +P  + +K
Sbjct: 164 LMSPFQLAIK 173


>AE014296-1764|AAF50194.3|  877|Drosophila melanogaster CG6718-PA,
           isoform A protein.
          Length = 877

 Score = 95.5 bits (227), Expect = 9e-20
 Identities = 46/130 (35%), Positives = 79/130 (60%), Gaps = 1/130 (0%)
 Frame = +2

Query: 275 DSMLLYGPKIPNDGKNPKDKYYEIVLYKPFTENLHQMYSLLRSETLESAEXKFIVFKERI 454
           D+MLL+ P  P +  N K   YEI+L +P +++    +SL RS   + AE +F  F +R+
Sbjct: 36  DAMLLFAP--PFNSSNEKRAVYEIILQRPTSDSNTTSFSLYRSPVQQEAEERFNAFLQRL 93

Query: 455 PIFIQITKDC-TVSTLQKLCDILSEXXSWTIAHLIAHFGLYEXLTHAAVXKHIXEIDPIT 631
           P+F+ I K+   V+ LQK CD L++  SWT++HLIA+F L + +++  + + + + D  T
Sbjct: 94  PVFVSIVKEYYNVNGLQKACDALADNPSWTLSHLIAYFNLVDYISNPKMLQCVDQADAAT 153

Query: 632 GATPLMVXLK 661
             +P  + +K
Sbjct: 154 LMSPFQLAIK 163


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,964,345
Number of Sequences: 53049
Number of extensions: 590214
Number of successful extensions: 1134
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1095
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1129
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4311772920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)