Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP08_F_H12
         (884 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc fi...    25   1.2  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    23   2.8  
DQ325077-1|ABD14091.1|  181|Apis mellifera complementary sex det...    23   4.9  
DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein ...    22   6.5  
AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein ...    22   6.5  
AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific pro...    22   6.5  

>AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc
           finger domain-Z3 isoform protein.
          Length = 92

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = -1

Query: 620 RFHXCVSLPPHESXVHTGQSALSNALLSTT 531
           R+    SL  H+S  H G S +   LL TT
Sbjct: 44  RYRTKNSLTTHKSLQHRGSSGMLKRLLKTT 73


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = +2

Query: 290 YGPKIPNDGKNPKDKYYEIVLYKPFTE 370
           YGP IP      +D+ Y++V  + + +
Sbjct: 653 YGPVIPEQSLTYQDQQYQVVSVEQYQQ 679


>DQ325077-1|ABD14091.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = +1

Query: 424 RXVHSVQRKNTHFYTNYQRLY 486
           + +H+    N + Y NY++LY
Sbjct: 88  KTIHNNNNYNNNNYNNYKKLY 108


>DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein 3
           protein.
          Length = 130

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +3

Query: 312 TVKILKINITKSFYTNRLQRIYIKCTVYFGQ 404
           T K   IN+ +  +++RL   Y KC +  G+
Sbjct: 26  TSKFDNINVDEILHSDRLLNNYFKCLMDEGR 56


>AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein
           protein.
          Length = 130

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +3

Query: 312 TVKILKINITKSFYTNRLQRIYIKCTVYFGQ 404
           T K   IN+ +  +++RL   Y KC +  G+
Sbjct: 26  TSKFDNINVDEILHSDRLLNNYFKCLMDEGR 56


>AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific
           protein 3c precursor protein.
          Length = 130

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +3

Query: 312 TVKILKINITKSFYTNRLQRIYIKCTVYFGQ 404
           T K   IN+ +  +++RL   Y KC +  G+
Sbjct: 26  TSKFDNINVDEILHSDRLLNNYFKCLMDEGR 56


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 214,185
Number of Sequences: 438
Number of extensions: 4052
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28766349
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)