Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP08_F_H09
         (903 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q98RZ0 Cluster: Putative uncharacterized protein orf201...    34   4.3  
UniRef50_Q4P5A1 Cluster: Putative uncharacterized protein; n=2; ...    34   4.3  

>UniRef50_Q98RZ0 Cluster: Putative uncharacterized protein orf201;
           n=1; Guillardia theta|Rep: Putative uncharacterized
           protein orf201 - Guillardia theta (Cryptomonas phi)
          Length = 201

 Score = 34.3 bits (75), Expect = 4.3
 Identities = 14/27 (51%), Positives = 17/27 (62%)
 Frame = -1

Query: 99  MAIYLWQRKNGQIKINLXGXSHIXGES 19
           M +YLW +KN Q +INL    HI G S
Sbjct: 124 MVVYLWGKKNAQQQINLINLIHIKGSS 150


>UniRef50_Q4P5A1 Cluster: Putative uncharacterized protein; n=2;
           Dikarya|Rep: Putative uncharacterized protein - Ustilago
           maydis (Smut fungus)
          Length = 353

 Score = 34.3 bits (75), Expect = 4.3
 Identities = 22/54 (40%), Positives = 28/54 (51%)
 Frame = +3

Query: 171 DGGCGGRNISLYLVERKEGSPTARSSRRESAKIVAEHSAAEK*FCSQNNTYVYT 332
           D GCG  ++SLYL ER   S     S   + KI  +  AAE+ F   NN  V+T
Sbjct: 125 DLGCGWGSLSLYLAERYPNSRIYALSNSRTQKIYIDSIAAERGF---NNLEVHT 175


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 416,937,527
Number of Sequences: 1657284
Number of extensions: 6495450
Number of successful extensions: 16498
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 16123
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16496
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 81981722200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)