Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP08_F_H07
         (922 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_1500 + 34010819-34011016,34013267-34013308,34014195-340142...    29   3.9  
12_02_0131 - 14030721-14030774,14030848-14031027,14032050-140323...    29   6.9  

>04_04_1500 +
           34010819-34011016,34013267-34013308,34014195-34014204,
           34014526-34014586,34014621-34014678,34015266-34015412,
           34015643-34016205,34018942-34019728
          Length = 621

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 23/72 (31%), Positives = 27/72 (37%)
 Frame = +2

Query: 107 GVLIATCLTSVMSDXPTTEPICEQAFGDVGPSGAYFKLYSYNQETKKCEEFIYGGCQGND 286
           G LIAT   S  +  P          G  GP G        N +TK CE F+ G C   D
Sbjct: 552 GELIATISPSTPAKKPAGSAAGAAPAGRGGPGGRS------NYKTKLCENFVKGTCTFGD 605

Query: 287 NRFNTLAECEQK 322
                  E EQ+
Sbjct: 606 RCHFAHGENEQR 617


>12_02_0131 -
           14030721-14030774,14030848-14031027,14032050-14032303,
           14034414-14034488,14034682-14034910
          Length = 263

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = +1

Query: 160 GADMRAGFWRCGP 198
           GA +R GFW+CGP
Sbjct: 64  GASVRLGFWQCGP 76


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,502,653
Number of Sequences: 37544
Number of extensions: 187282
Number of successful extensions: 393
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 386
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 393
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2624101760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)