Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP08_F_H04
         (883 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    24   1.8  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   2.4  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   2.4  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   2.4  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   2.4  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    23   2.4  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   9.7  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   9.7  

>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = -1

Query: 490 IHVFFFLIPFSFHRRXRTTLVSIYLCLRIVVLSLST 383
           I   F L+P   H R    +  +YL    VVLSL +
Sbjct: 13  ISKIFALLPVKKHHRLEKLVPCVYLTSFSVVLSLGS 48


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = -3

Query: 71   QTGGTRDDNDXXLKDSLXG 15
            Q+GGT DD++  ++ SL G
Sbjct: 1097 QSGGTSDDDEGSIEISLAG 1115


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = -3

Query: 71   QTGGTRDDNDXXLKDSLXG 15
            Q+GGT DD++  ++ SL G
Sbjct: 1097 QSGGTSDDDEGSIEISLAG 1115


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = -3

Query: 71   QTGGTRDDNDXXLKDSLXG 15
            Q+GGT DD++  ++ SL G
Sbjct: 1097 QSGGTSDDDEGSIEISLAG 1115


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = -3

Query: 71   QTGGTRDDNDXXLKDSLXG 15
            Q+GGT DD++  ++ SL G
Sbjct: 1097 QSGGTSDDDEGSIEISLAG 1115


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -2

Query: 558 LKXNIFKFITDVKNIFSSFIKNVYMFFFF 472
           L+   F+F+  V NIF +F+  ++    F
Sbjct: 61  LEWKSFRFVYAVYNIFGAFVMGLFCILKF 89


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = -3

Query: 149 RQPCLQVVGIFDVNGHLGF 93
           R P    +G+F +NG   F
Sbjct: 627 RAPTFTALGLFPINGSFAF 645


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = +2

Query: 107 HSHQRFRRPEDKAGGSRRQARRDR 178
           H  +   R   ++GG RRQ R  R
Sbjct: 572 HYKEHIMRSITESGGRRRQTREKR 595


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,694
Number of Sequences: 336
Number of extensions: 2940
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24410188
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)