Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP08_F_G22
         (885 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_0834 - 21626491-21626508,21626720-21626843,21626927-216270...    98   9e-21
03_05_1069 + 30118930-30120120                                         29   5.0  

>08_02_0834 -
           21626491-21626508,21626720-21626843,21626927-21627012,
           21627869-21627874
          Length = 77

 Score = 97.9 bits (233), Expect = 9e-21
 Identities = 40/69 (57%), Positives = 55/69 (79%)
 Frame = +3

Query: 186 ERYNIHSQLEHLQSKYIGTGHADTTKYEWLMNQHRDSCCSYMGHPDLLSYFAIVENESKA 365
           +R+NI+SQLEHLQ+KY+GTGHAD  ++EW +N  RDS  SY+GH  +L+YF+I ENES  
Sbjct: 5   DRFNINSQLEHLQAKYVGTGHADLNRFEWAVNIQRDSYASYIGHYPMLAYFSIAENESIG 64

Query: 366 RVKFNLMER 392
           R ++N M+R
Sbjct: 65  RERYNFMQR 73


>03_05_1069 + 30118930-30120120
          Length = 396

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
 Frame = +3

Query: 240 TGHADTTKYEWLMNQHRDSCCSYM-GHPDLLSYFAIVE-NESKARVKFNLME 389
           +G AD T Y W  +    SC S + GH + +   AIVE N+  A V  + ++
Sbjct: 281 SGSADNTIYVWRRDGGVHSCLSVLTGHTEPIRCLAIVEDNKDNAAVPVDAVD 332


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,471,049
Number of Sequences: 37544
Number of extensions: 258994
Number of successful extensions: 483
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 477
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 483
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2503236492
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)