Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP08_F_G21
         (860 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_01_0204 + 1611837-1611840,1611926-1612048,1614570-1614659,161...    35   0.096
01_07_0027 - 40578075-40578437,40578647-40578767,40578852-405789...    32   0.51 
05_01_0294 - 2291175-2291223,2291591-2292039,2292143-2292211,229...    31   1.2  

>03_01_0204 +
           1611837-1611840,1611926-1612048,1614570-1614659,
           1615529-1616095,1616235-1616959,1617065-1617252,
           1617331-1617778
          Length = 714

 Score = 34.7 bits (76), Expect = 0.096
 Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
 Frame = +3

Query: 207 GWFTNFI-GAFXYVGDITTVENRTYRVGLVNMFMSLGYPIGSALSGILLNLIGYYGVFTL 383
           GW    I GA  Y+ +   ++N     GL+     +G  I +ALSG++ N IG   + ++
Sbjct: 65  GWDNAAIAGAIMYIKNEFNLQNDPMMEGLILAMSLIGATIITALSGMITNSIGKRPLLSV 124

Query: 384 SVMLYLFS 407
           + +LY  S
Sbjct: 125 AAILYSIS 132


>01_07_0027 -
           40578075-40578437,40578647-40578767,40578852-40578952,
           40579176-40579451,40579485-40579805,40581609-40581623,
           40581969-40582295,40583287-40583538
          Length = 591

 Score = 32.3 bits (70), Expect = 0.51
 Identities = 19/68 (27%), Positives = 30/68 (44%)
 Frame = -2

Query: 631 NSPCIGPNTTQTTISSKATRNRRFPGPFLNATLKVSKTSRTSKNSLKKLPQPVFLLSFSA 452
           N P   PN  +   S+  T+  RFP P L+A++  S  S    ++ +     V  L    
Sbjct: 464 NKPQAKPNIPRLVTSTSTTKLERFPPPHLDASIGFSLDSSADVSTEQFFTSSVVELKKMP 523

Query: 451 TTLFGSSK 428
           + +FG  K
Sbjct: 524 SLIFGHMK 531


>05_01_0294 -
           2291175-2291223,2291591-2292039,2292143-2292211,
           2292397-2292449,2292492-2294478
          Length = 868

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 19/53 (35%), Positives = 26/53 (49%)
 Frame = +3

Query: 246 GDITTVENRTYRVGLVNMFMSLGYPIGSALSGILLNLIGYYGVFTLSVMLYLF 404
           GDI   +N+     L N+F SL +  G     ILLN + YY +F   +   LF
Sbjct: 122 GDIMNDQNQNITWSL-NIFYSLVFAQGIMFVTILLNPLSYYFLFNAGIKYKLF 173


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,171,492
Number of Sequences: 37544
Number of extensions: 360425
Number of successful extensions: 804
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 782
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 804
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2409218220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)