Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP08_F_G18
(1057 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-tr... 111 2e-25
SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans i... 104 2e-23
SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-tr... 83 6e-17
SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans... 76 7e-15
SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans... 74 4e-14
SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-... 61 2e-10
SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-tran... 56 8e-09
SPCC553.04 |cyp9||WD repeat containing cyclophilin family peptid... 56 1e-08
SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating tra... 39 0.001
SPBP8B7.07c |set6||histone lysine methyltransferase Set6 |Schizo... 28 2.5
SPCC1259.04 |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 27 5.9
>SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 162
Score = 111 bits (267), Expect = 2e-25
Identities = 54/87 (62%), Positives = 60/87 (68%)
Frame = +2
Query: 176 PLGKIVIELRSDVTPKTCENFRALCTGXKGFXYXGSIXHRVIPNFMLQGGDFXNHNGTGG 355
PLG+IV +L DV PKT NFRALCTG KG+ Y GS HRVIP FMLQGGDF NGTGG
Sbjct: 14 PLGRIVFKLFDDVVPKTAANFRALCTGEKGYGYAGSTFHRVIPQFMLQGGDFTRGNGTGG 73
Query: 356 KSIYGXXYEDDXLTLXSHWTLXVLSMA 436
KSIYG + D+ L H +LSMA
Sbjct: 74 KSIYGEKFPDENFAL-KHNKPGLLSMA 99
>SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 201
Score = 104 bits (249), Expect = 2e-23
Identities = 52/89 (58%), Positives = 59/89 (66%)
Frame = +2
Query: 170 DAPLGKIVIELRSDVTPKTCENFRALCTGXKGFXYXGSIXHRVIPNFMLQGGDFXNHNGT 349
D LG++ I L PKT ENFRAL TG KGF Y GSI HRVIPNFM+QGGD +GT
Sbjct: 37 DEFLGRVTIGLFGKTVPKTAENFRALATGEKGFGYEGSIFHRVIPNFMIQGGDITKGDGT 96
Query: 350 GGKSIYGXXYEDDXLTLXSHWTLXVLSMA 436
GGKSIYG + D+ L SH +LSMA
Sbjct: 97 GGKSIYGSRFPDENFKL-SHQRPGLLSMA 124
>SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-trans
isomerase Wis2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 356
Score = 83.0 bits (196), Expect = 6e-17
Identities = 46/97 (47%), Positives = 57/97 (58%), Gaps = 4/97 (4%)
Frame = +2
Query: 158 LTVDDAPLGKIVIELRSDVTPKTCENFRALCTGXKG----FXYXGSIXHRVIPNFMLQGG 325
+++D I EL +V PKT +NF +LC G + Y GS HRVI NFMLQGG
Sbjct: 9 ISIDGKIQPTIYFELFDNVVPKTVKNFASLCNGFEKDGRCLTYKGSRFHRVIKNFMLQGG 68
Query: 326 DFXNHNGTGGKSIYGXXYEDDXLTLXSHWTLXVLSMA 436
DF NGTGG+SIYG +ED+ L H +LSMA
Sbjct: 69 DFTRGNGTGGESIYGEKFEDENFEL-KHDKPFLLSMA 104
>SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 76.2 bits (179), Expect = 7e-15
Identities = 41/86 (47%), Positives = 55/86 (63%)
Frame = +2
Query: 179 LGKIVIELRSDVTPKTCENFRALCTGXKGFXYXGSIXHRVIPNFMLQGGDFXNHNGTGGK 358
LGKI+IEL ++ PKTC+NF L +G+ Y G I HRVIP+F++QGGD G GG
Sbjct: 10 LGKILIELYTEHAPKTCQNFYTLAK--EGY-YDGVIFHRVIPDFVIQGGD-PTGTGRGGT 65
Query: 359 SIYGXXYEDDXLTLXSHWTLXVLSMA 436
SIYG ++D+ + H +LSMA
Sbjct: 66 SIYGDKFDDEIHSDLHHTGAGILSMA 91
>SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp3 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 173
Score = 73.7 bits (173), Expect = 4e-14
Identities = 42/100 (42%), Positives = 55/100 (55%), Gaps = 7/100 (7%)
Frame = +2
Query: 158 LTVDDAPLGKIVIELRSDVTPKTCENFRALCTGX------KGFXYXGSIXHRVIPNFMLQ 319
+ +D LG+I I L S + PKT ENFR CTG K Y S HR+I FM+Q
Sbjct: 11 IAIDGRLLGRIKIRLFSSIVPKTAENFRQFCTGETLGVNQKPIGYKNSTFHRIIQGFMIQ 70
Query: 320 GGDFXNHNGTGGKSIY-GXXYEDDXLTLXSHWTLXVLSMA 436
GGDF + +GTG +I+ + D+ TL H +LSMA
Sbjct: 71 GGDFVSGDGTGSATIFNSRTFPDENFTL-KHDRPGLLSMA 109
>SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl
cis-trans isomerase Cyp7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 61.3 bits (142), Expect = 2e-10
Identities = 32/66 (48%), Positives = 40/66 (60%)
Frame = +2
Query: 182 GKIVIELRSDVTPKTCENFRALCTGXKGFXYXGSIXHRVIPNFMLQGGDFXNHNGTGGKS 361
G I IEL PK C NF LC +G+ Y G+I HRV+P F++QGGD G GG+S
Sbjct: 22 GDIQIELWCKEVPKACRNFIQLCL--EGY-YDGTIVHRVVPEFLIQGGD-PTGTGMGGES 77
Query: 362 IYGXXY 379
IYG +
Sbjct: 78 IYGEPF 83
>SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 516
Score = 56.0 bits (129), Expect = 8e-09
Identities = 33/85 (38%), Positives = 47/85 (55%)
Frame = +2
Query: 182 GKIVIELRSDVTPKTCENFRALCTGXKGFXYXGSIXHRVIPNFMLQGGDFXNHNGTGGKS 361
G+I IEL +D P NF L +G+ Y +I HR I FM+QGGD + G GG+S
Sbjct: 285 GEINIELHTDYAPHAVYNFVQLAK--QGY-YRNTIFHRNIARFMIQGGD-PSGTGRGGQS 340
Query: 362 IYGXXYEDDXLTLXSHWTLXVLSMA 436
I+G ++D+ H ++SMA
Sbjct: 341 IWGKPFKDEFCNPLKHDDRGIISMA 365
>SPCC553.04 |cyp9||WD repeat containing cyclophilin family
peptidyl-prolyl cis-trans isomerase
Cyp9|Schizosaccharomyces pombe|chr 3|||Manual
Length = 610
Score = 55.6 bits (128), Expect = 1e-08
Identities = 33/85 (38%), Positives = 46/85 (54%)
Frame = +2
Query: 182 GKIVIELRSDVTPKTCENFRALCTGXKGFXYXGSIXHRVIPNFMLQGGDFXNHNGTGGKS 361
G I I+L + PK +NF T + Y +I HR+I NFM+QGGD +GTGG+S
Sbjct: 464 GDISIKLYPEEAPKAVQNFT---THAENGYYDNTIFHRIIKNFMIQGGDPLG-DGTGGES 519
Query: 362 IYGXXYEDDXLTLXSHWTLXVLSMA 436
I+ +ED+ H +SMA
Sbjct: 520 IWKKDFEDEISPNLKHDRPFTVSMA 544
>SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating
transcription Rct1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 38.7 bits (86), Expect = 0.001
Identities = 22/66 (33%), Positives = 32/66 (48%)
Frame = +2
Query: 170 DAPLGKIVIELRSDVTPKTCENFRALCTGXKGFXYXGSIXHRVIPNFMLQGGDFXNHNGT 349
+ +G +VI+L PKTCENF LC K Y + + N+ Q GD G
Sbjct: 6 ETTVGDLVIDLFVKEAPKTCENFLKLC---KLKYYNFCPFYNIQHNYTCQTGDPLGPTGD 62
Query: 350 GGKSIY 367
GG+ ++
Sbjct: 63 GGRCVW 68
>SPBP8B7.07c |set6||histone lysine methyltransferase Set6
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 483
Score = 27.9 bits (59), Expect = 2.5
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +2
Query: 155 TLTVDDAPLGKIVIELRSDVTPKTCENFRALCT 253
T+ D+ P+GKI+I R D+ N C+
Sbjct: 18 TVATDNIPIGKIIIRKRVDILSLDSANLTRTCS 50
>SPCC1259.04 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 168
Score = 26.6 bits (56), Expect = 5.9
Identities = 28/103 (27%), Positives = 42/103 (40%), Gaps = 7/103 (6%)
Frame = +3
Query: 141 TSILRRSLLTMPHWEKLLLS*EVTSLPRRVKTSVPCALAXKASVTRAPFXIVSSPISCCK 320
+ + RR LL H LL+ T LP + V+ F S + +
Sbjct: 36 SEVYRRILLENAHLNDLLIDMNSTVLPTPPASPPGSPYWEAKPVSHTVFLESPSDVFTLE 95
Query: 321 EGTSPT------ITALGESP-STAXSMKTTXSPLXHTGLXPSS 428
+ + T +TAL +S ST + K+ SPL G+ PSS
Sbjct: 96 KPIASTHRWLSKLTALSKSTNSTLSTPKSFHSPLQSRGISPSS 138
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,515,122
Number of Sequences: 5004
Number of extensions: 39598
Number of successful extensions: 111
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 95
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 104
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 555217708
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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