Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP08_F_G17
         (892 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0444 + 3141018-3141503,3141967-3142066,3142940-3142980           30   2.1  
10_06_0110 + 10889414-10889669,10889756-10889806,10890595-108911...    28   8.7  

>06_01_0444 + 3141018-3141503,3141967-3142066,3142940-3142980
          Length = 208

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 20/84 (23%), Positives = 34/84 (40%), Gaps = 1/84 (1%)
 Frame = +3

Query: 471 DDGRPAYGDGKDKTSPRVSWKLIALWENNKVYFKILNTERNQYLVL-GVGTNWNGXHMAF 647
           DD R      +D+ S   +W +  L  N      + +    +YL       +WN   +  
Sbjct: 24  DDDRSGVSLQQDRASVHAAWAVHILHFNGGDVLMLHSAANGRYLAAYRAEGSWNVERL-- 81

Query: 648 GVNSVDSFRAQWYLQPAKYDNDVL 719
            +N + S    WY   ++Y +DVL
Sbjct: 82  NLNRLPSLTFSWYALGSRYGDDVL 105


>10_06_0110 +
           10889414-10889669,10889756-10889806,10890595-10891163,
           10891178-10891660,10891747-10891944,10893300-10893354,
           10893372-10893631
          Length = 623

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
 Frame = -1

Query: 436 PSRLYISLIAFSAKISLNSTGKQSRTMS--LESLEPKLIGVLHAVHL 302
           P RL   L AFS   SL  T K  RT+    +SL+  L+  +H  +L
Sbjct: 298 PPRLPPELAAFSPLASLGVTVKDERTLERCTKSLQSVLVDKIHGFYL 344


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,581,841
Number of Sequences: 37544
Number of extensions: 391282
Number of successful extensions: 1154
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1123
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1154
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2506954360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)