Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP08_F_G17
(892 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY069830-1|AAL39975.1| 1218|Drosophila melanogaster SD07723p pro... 29 6.5
AY061583-1|AAL29131.1| 842|Drosophila melanogaster SD03196p pro... 29 6.5
AE013599-1765|AAF58335.2| 1218|Drosophila melanogaster CG12295-P... 29 6.5
U01088-1|AAA19976.2| 390|Drosophila melanogaster truncated nucl... 29 8.6
AY069693-1|AAL39838.1| 259|Drosophila melanogaster LD46621p pro... 29 8.6
AF217651-3|AAF35309.1| 259|Drosophila melanogaster c12.1 protein. 29 8.6
AF215703-1|AAF43004.1| 5322|Drosophila melanogaster KISMET-L lon... 29 8.6
AF113847-1|AAD37500.1| 2151|Drosophila melanogaster kismet protein. 29 8.6
AE014298-1327|AAF46488.1| 259|Drosophila melanogaster CG12135-P... 29 8.6
AE014296-3499|AAN12161.3| 392|Drosophila melanogaster CG18023-P... 29 8.6
AE014296-3498|AAF51692.2| 862|Drosophila melanogaster CG18023-P... 29 8.6
AE014134-63|AAF51530.1| 2151|Drosophila melanogaster CG3696-PB, ... 29 8.6
AE014134-62|AAF51527.3| 5322|Drosophila melanogaster CG3696-PA, ... 29 8.6
>AY069830-1|AAL39975.1| 1218|Drosophila melanogaster SD07723p protein.
Length = 1218
Score = 29.5 bits (63), Expect = 6.5
Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 5/74 (6%)
Frame = +2
Query: 167 ILEEQLYNSVVVADYDSAVEKSKHLYEEKKSEVITNVVNKLIRNNKM---NCMEYAYQL- 334
+LEE +Y V V DY + +SK+ + S ++ + + L+R K + Y QL
Sbjct: 974 LLEENVYRQVTVYDYQAVCFESKN--DNNASSMLLSPLFHLLRVGKWLLHTALWYIVQLL 1031
Query: 335 -WLQGLQGHRPGLF 373
W G+ H ++
Sbjct: 1032 QWAPGVSSHYADMY 1045
>AY061583-1|AAL29131.1| 842|Drosophila melanogaster SD03196p
protein.
Length = 842
Score = 29.5 bits (63), Expect = 6.5
Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 5/74 (6%)
Frame = +2
Query: 167 ILEEQLYNSVVVADYDSAVEKSKHLYEEKKSEVITNVVNKLIRNNKM---NCMEYAYQL- 334
+LEE +Y V V DY + +SK+ + S ++ + + L+R K + Y QL
Sbjct: 598 LLEENVYRQVTVYDYQAVCFESKN--DNNASSMLLSPLFHLLRVGKWLLHTALWYIVQLL 655
Query: 335 -WLQGLQGHRPGLF 373
W G+ H ++
Sbjct: 656 QWAPGVSSHYADMY 669
>AE013599-1765|AAF58335.2| 1218|Drosophila melanogaster CG12295-PB
protein.
Length = 1218
Score = 29.5 bits (63), Expect = 6.5
Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 5/74 (6%)
Frame = +2
Query: 167 ILEEQLYNSVVVADYDSAVEKSKHLYEEKKSEVITNVVNKLIRNNKM---NCMEYAYQL- 334
+LEE +Y V V DY + +SK+ + S ++ + + L+R K + Y QL
Sbjct: 974 LLEENVYRQVTVYDYQAVCFESKN--DNNASSMLLSPLFHLLRVGKWLLHTALWYIVQLL 1031
Query: 335 -WLQGLQGHRPGLF 373
W G+ H ++
Sbjct: 1032 QWAPGVSSHYADMY 1045
>U01088-1|AAA19976.2| 390|Drosophila melanogaster truncated nuclear
hormone receptorsuperfamily protein protein.
Length = 390
Score = 29.1 bits (62), Expect = 8.6
Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Frame = +1
Query: 226 KEQAFIRGEEERSHH-KCREQTDTKQQDELHGVRLSTLAPGTPRTSSGIVSQLSSDLSSP 402
++Q ++ ++++ H + ++ +QQ + GVR+ T P TP+T Q+ S SSP
Sbjct: 10 QQQHLLQQQQQQQHQPQLQQHHQLQQQPHVSGVRVKT--PSTPQT-----PQMCSIASSP 62
Query: 403 KTRLSLCTSA 432
+ L C SA
Sbjct: 63 -SELGGCNSA 71
>AY069693-1|AAL39838.1| 259|Drosophila melanogaster LD46621p
protein.
Length = 259
Score = 29.1 bits (62), Expect = 8.6
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 7/55 (12%)
Frame = +1
Query: 250 EEERSHHKCREQTDTKQQDE-------LHGVRLSTLAPGTPRTSSGIVSQLSSDL 393
++ER R +++ KQ+DE L G L PGT +++G S L DL
Sbjct: 160 KQERLQETARRESEKKQEDERIRMENILSGNPLMNYEPGTAASAAGRASGLGGDL 214
>AF217651-3|AAF35309.1| 259|Drosophila melanogaster c12.1 protein.
Length = 259
Score = 29.1 bits (62), Expect = 8.6
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 7/55 (12%)
Frame = +1
Query: 250 EEERSHHKCREQTDTKQQDE-------LHGVRLSTLAPGTPRTSSGIVSQLSSDL 393
++ER R +++ KQ+DE L G L PGT +++G S L DL
Sbjct: 160 KQERLQETARRESEKKQEDERIRMENILSGNPLMNYEPGTAASAAGRASGLGGDL 214
>AF215703-1|AAF43004.1| 5322|Drosophila melanogaster KISMET-L long
isoform protein.
Length = 5322
Score = 29.1 bits (62), Expect = 8.6
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +1
Query: 247 GEEERSHHKCREQTDTKQQDELHGVRLSTLAPGTPRTSSGIVSQLSSDLSSPKT 408
GE+E S KC + D K +E P +P G VS++ +D ++P T
Sbjct: 3582 GEKEGSPEKCSDAEDKKFSEE---------KPSSPAVPDGKVSEMEADEAAPNT 3626
>AF113847-1|AAD37500.1| 2151|Drosophila melanogaster kismet protein.
Length = 2151
Score = 29.1 bits (62), Expect = 8.6
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +1
Query: 247 GEEERSHHKCREQTDTKQQDELHGVRLSTLAPGTPRTSSGIVSQLSSDLSSPKT 408
GE+E S KC + D K +E P +P G VS++ +D ++P T
Sbjct: 411 GEKEGSPEKCSDAEDKKFSEE---------KPSSPAVPDGKVSEMEADEAAPNT 455
>AE014298-1327|AAF46488.1| 259|Drosophila melanogaster CG12135-PA
protein.
Length = 259
Score = 29.1 bits (62), Expect = 8.6
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 7/55 (12%)
Frame = +1
Query: 250 EEERSHHKCREQTDTKQQDE-------LHGVRLSTLAPGTPRTSSGIVSQLSSDL 393
++ER R +++ KQ+DE L G L PGT +++G S L DL
Sbjct: 160 KQERLQETARRESEKKQEDERIRMENILSGNPLMNYEPGTAASAAGRASGLGGDL 214
>AE014296-3499|AAN12161.3| 392|Drosophila melanogaster CG18023-PB,
isoform B protein.
Length = 392
Score = 29.1 bits (62), Expect = 8.6
Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Frame = +1
Query: 226 KEQAFIRGEEERSHH-KCREQTDTKQQDELHGVRLSTLAPGTPRTSSGIVSQLSSDLSSP 402
++Q ++ ++++ H + ++ +QQ + GVR+ T P TP+T Q+ S SSP
Sbjct: 10 QQQHLLQQQQQQQHQPQLQQHHQLQQQPHVSGVRVKT--PSTPQT-----PQMCSIASSP 62
Query: 403 KTRLSLCTSA 432
+ L C SA
Sbjct: 63 -SELGGCNSA 71
>AE014296-3498|AAF51692.2| 862|Drosophila melanogaster CG18023-PA,
isoform A protein.
Length = 862
Score = 29.1 bits (62), Expect = 8.6
Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Frame = +1
Query: 226 KEQAFIRGEEERSHH-KCREQTDTKQQDELHGVRLSTLAPGTPRTSSGIVSQLSSDLSSP 402
++Q ++ ++++ H + ++ +QQ + GVR+ T P TP+T Q+ S SSP
Sbjct: 480 QQQHLLQQQQQQQHQPQLQQHHQLQQQPHVSGVRVKT--PSTPQT-----PQMCSIASSP 532
Query: 403 KTRLSLCTSA 432
+ L C SA
Sbjct: 533 -SELGGCNSA 541
>AE014134-63|AAF51530.1| 2151|Drosophila melanogaster CG3696-PB,
isoform B protein.
Length = 2151
Score = 29.1 bits (62), Expect = 8.6
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +1
Query: 247 GEEERSHHKCREQTDTKQQDELHGVRLSTLAPGTPRTSSGIVSQLSSDLSSPKT 408
GE+E S KC + D K +E P +P G VS++ +D ++P T
Sbjct: 411 GEKEGSPEKCSDAEDKKFSEE---------KPSSPAVPDGKVSEMEADEAAPNT 455
>AE014134-62|AAF51527.3| 5322|Drosophila melanogaster CG3696-PA,
isoform A protein.
Length = 5322
Score = 29.1 bits (62), Expect = 8.6
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +1
Query: 247 GEEERSHHKCREQTDTKQQDELHGVRLSTLAPGTPRTSSGIVSQLSSDLSSPKT 408
GE+E S KC + D K +E P +P G VS++ +D ++P T
Sbjct: 3582 GEKEGSPEKCSDAEDKKFSEE---------KPSSPAVPDGKVSEMEADEAAPNT 3626
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,063,739
Number of Sequences: 53049
Number of extensions: 649063
Number of successful extensions: 2335
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2179
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2335
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4352837424
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -