Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP08_F_G17
(892 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46934-11|CAE18043.1| 497|Caenorhabditis elegans Hypothetical p... 31 0.84
Z46934-10|CAD18882.1| 495|Caenorhabditis elegans Hypothetical p... 31 0.84
Z19153-3|CAA79547.1| 301|Caenorhabditis elegans Hypothetical pr... 30 2.6
Z75529-3|CAA99786.2| 1099|Caenorhabditis elegans Hypothetical pr... 29 3.4
AL034488-4|CAA22449.1| 497|Caenorhabditis elegans Hypothetical ... 29 3.4
U13019-4|AAC24451.1| 222|Caenorhabditis elegans Hypothetical pr... 29 4.5
U13019-3|AAC24452.2| 713|Caenorhabditis elegans Hypothetical pr... 29 4.5
AL034488-6|CAA22450.2| 467|Caenorhabditis elegans Hypothetical ... 29 5.9
AF022985-11|AAB69967.2| 650|Caenorhabditis elegans Hypothetical... 29 5.9
>Z46934-11|CAE18043.1| 497|Caenorhabditis elegans Hypothetical
protein ZK1320.12b protein.
Length = 497
Score = 31.5 bits (68), Expect = 0.84
Identities = 20/68 (29%), Positives = 35/68 (51%)
Frame = +2
Query: 113 YVFSWHLCMLQIPDVPNDILEEQLYNSVVVADYDSAVEKSKHLYEEKKSEVITNVVNKLI 292
YV+ W + +PD P+ ++ ++ D D + EK + +KK IT++VN +I
Sbjct: 183 YVYEW---LPPLPD-PHTYIKTEISE-----DIDFSYEKVREAMSQKKRNGITSLVNYMI 233
Query: 293 RNNKMNCM 316
RN C+
Sbjct: 234 RNYPSICL 241
>Z46934-10|CAD18882.1| 495|Caenorhabditis elegans Hypothetical
protein ZK1320.12a protein.
Length = 495
Score = 31.5 bits (68), Expect = 0.84
Identities = 20/68 (29%), Positives = 35/68 (51%)
Frame = +2
Query: 113 YVFSWHLCMLQIPDVPNDILEEQLYNSVVVADYDSAVEKSKHLYEEKKSEVITNVVNKLI 292
YV+ W + +PD P+ ++ ++ D D + EK + +KK IT++VN +I
Sbjct: 183 YVYEW---LPPLPD-PHTYIKTEISE-----DIDFSYEKVREAMSQKKRNGITSLVNYMI 233
Query: 293 RNNKMNCM 316
RN C+
Sbjct: 234 RNYPSICL 241
>Z19153-3|CAA79547.1| 301|Caenorhabditis elegans Hypothetical
protein C38C10.3 protein.
Length = 301
Score = 29.9 bits (64), Expect = 2.6
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Frame = +1
Query: 250 EEERSHHKCREQTDTKQQDELHGVRLSTLAPG---TPRTSSGIVSQLSSDLSSPKTRLSL 420
E S++K ++ + Q++ L+ + G + SSG+VSQ+SS SS + R +L
Sbjct: 56 ESPTSYNKYQKNVEPVQKENQKPKDLNKMTAGPHIAVKNSSGLVSQISSTTSSERKRRTL 115
Query: 421 CTSATVS 441
++ S
Sbjct: 116 ARPSSSS 122
>Z75529-3|CAA99786.2| 1099|Caenorhabditis elegans Hypothetical
protein C44H9.4 protein.
Length = 1099
Score = 29.5 bits (63), Expect = 3.4
Identities = 13/54 (24%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Frame = +3
Query: 486 AYGDGKDKTSPRVSWKLIALWENNK---VYFKILNTERNQYLVLGVGTNWNGXH 638
++G + PR ++ I+ + + YF++L+ E N+Y+++ N +G H
Sbjct: 129 SWGPNFNSPKPRQVFRDISTYSYERGIRAYFRVLSAEDNKYILIACHANLHGLH 182
Score = 28.3 bits (60), Expect = 7.8
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -1
Query: 214 VVIGDDDAIVKLLLQNVVRDVRNLQHTE 131
+++ D+I LL NV+RDV N+Q E
Sbjct: 727 IIVSTADSIHNLLENNVLRDVSNIQFDE 754
>AL034488-4|CAA22449.1| 497|Caenorhabditis elegans Hypothetical
protein Y54G11A.4 protein.
Length = 497
Score = 29.5 bits (63), Expect = 3.4
Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 3/64 (4%)
Frame = +3
Query: 627 NGXHMA---FGVNSVDSFRAQWYLQPAKYDNDVLFYIYNREYSKALTLVEXXLSPRVTAW 797
NG H F + D +R W L Y + LF+I + EY AL + + + R +
Sbjct: 227 NGRHKEGKEFMYKTEDDWRQGWMLAAHNYWHTALFHIESAEYEPALEIFDREIVKRSSKV 286
Query: 798 PGDT 809
G +
Sbjct: 287 DGSS 290
>U13019-4|AAC24451.1| 222|Caenorhabditis elegans Hypothetical
protein T12A2.15b protein.
Length = 222
Score = 29.1 bits (62), Expect = 4.5
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +3
Query: 495 DGKDKTSPRVSWKLIALWENNKVYFKILNTERN 593
D KD+ +P VS KL+AL N +V+ K T +N
Sbjct: 120 DKKDQCNPYVSVKLVALDGNKEVFKKKTPTAKN 152
>U13019-3|AAC24452.2| 713|Caenorhabditis elegans Hypothetical
protein T12A2.15a protein.
Length = 713
Score = 29.1 bits (62), Expect = 4.5
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +3
Query: 495 DGKDKTSPRVSWKLIALWENNKVYFKILNTERN 593
D KD+ +P VS KL+AL N +V+ K T +N
Sbjct: 611 DKKDQCNPYVSVKLVALDGNKEVFKKKTPTAKN 643
>AL034488-6|CAA22450.2| 467|Caenorhabditis elegans Hypothetical
protein Y54G11A.7 protein.
Length = 467
Score = 28.7 bits (61), Expect = 5.9
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 3/56 (5%)
Frame = +3
Query: 627 NGXHMA---FGVNSVDSFRAQWYLQPAKYDNDVLFYIYNREYSKALTLVEXXLSPR 785
NG H F + D +R W L Y + LF+I EY AL + + ++ R
Sbjct: 227 NGRHKEGKEFMYKTEDDWRQGWMLASHNYWHTALFHIEYAEYESALGIFDREIANR 282
>AF022985-11|AAB69967.2| 650|Caenorhabditis elegans Hypothetical
protein T15B7.14 protein.
Length = 650
Score = 28.7 bits (61), Expect = 5.9
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Frame = -1
Query: 769 SSTSVKALLYSRL*M*NKTSLSYLAG--CRYHWALKLSTLLTPKAIXSPFQLVPTPNTKY 596
++ S+ YS+L + K++L Y+A C +W + T T K S F L+ P +
Sbjct: 73 TNQSLTTFEYSKLGIFRKSTLFYIAVAVCYLYWLIY--TFCTFKFSRSQFDLLIAPYRGF 130
Query: 595 WLRSVFKI 572
+L+SV +
Sbjct: 131 YLKSVLML 138
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,154,571
Number of Sequences: 27780
Number of extensions: 328999
Number of successful extensions: 1014
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 979
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1014
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2255353870
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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