Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP08_F_G15
         (876 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0486 - 3455030-3455770                                           29   4.9  
12_02_0299 - 17051570-17052474,17053542-17053755                       29   6.5  
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330...    29   6.5  
01_06_0357 - 28668894-28669238,28669510-28669537,28669578-286696...    29   6.5  

>06_01_0486 - 3455030-3455770
          Length = 246

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -3

Query: 469 PPPXXPPHXPPPSXP 425
           PPP  PP+ PPP+ P
Sbjct: 96  PPPYVPPYIPPPTPP 110


>12_02_0299 - 17051570-17052474,17053542-17053755
          Length = 372

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = -3

Query: 469 PPPXXPPHXPPPSXP 425
           PPP  PP  PPPS P
Sbjct: 321 PPPPPPPPPPPPSFP 335


>08_01_0375 -
           3307206-3307316,3307870-3307965,3308061-3308132,
           3308247-3308315,3308427-3308513,3308753-3308858,
           3309118-3309237,3309327-3309406,3309497-3309878,
           3310746-3310814,3311460-3312202
          Length = 644

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = -3

Query: 469 PPPXXPPHXPPPSXP 425
           PPP  PP  PPPS P
Sbjct: 107 PPPPPPPPSPPPSAP 121


>01_06_0357 -
           28668894-28669238,28669510-28669537,28669578-28669635,
           28669836-28669916,28670395-28670526,28670609-28670926,
           28672495-28673317
          Length = 594

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = -3

Query: 469 PPPXXPPHXPPPSXP 425
           PPP  PP  PPPS P
Sbjct: 2   PPPPPPPPPPPPSPP 16


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,898,180
Number of Sequences: 37544
Number of extensions: 57647
Number of successful extensions: 2619
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 968
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2260
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2467979640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)