Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP08_F_G09
(894 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 38 0.013
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 38 0.013
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 38 0.013
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 35 0.090
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 34 0.16
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 34 0.16
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 34 0.16
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 34 0.16
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 33 0.36
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 33 0.36
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 32 0.48
Z70753-10|CAD44125.1| 296|Caenorhabditis elegans Hypothetical p... 32 0.64
Z70753-1|CAD44126.1| 296|Caenorhabditis elegans Hypothetical pr... 32 0.64
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 32 0.64
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 32 0.64
AF039047-13|AAM15587.1| 402|Caenorhabditis elegans Coexpressed ... 31 1.1
Z79694-6|CAB01958.1| 316|Caenorhabditis elegans Hypothetical pr... 31 1.5
Z79694-5|CAB01961.1| 316|Caenorhabditis elegans Hypothetical pr... 31 1.5
Z75542-6|CAA99864.3| 552|Caenorhabditis elegans Hypothetical pr... 31 1.5
Z75538-3|CAA99842.3| 552|Caenorhabditis elegans Hypothetical pr... 31 1.5
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 31 1.5
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 31 1.5
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 31 1.5
Z95559-4|CAB09004.1| 110|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical pr... 30 1.9
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 30 1.9
U14635-8|AAK84492.1| 307|Caenorhabditis elegans Collagen protei... 30 1.9
L15418-1|AAA17445.1| 307|Caenorhabditis elegans col-36 collagen... 30 1.9
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 30 1.9
Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical pr... 30 2.6
Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical pr... 30 2.6
U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protei... 30 2.6
AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen prot... 30 2.6
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 30 2.6
U13070-20|AAN63418.1| 641|Caenorhabditis elegans Hypothetical p... 29 3.4
U13070-18|AAC46635.2| 646|Caenorhabditis elegans Hypothetical p... 29 3.4
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 3.4
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 3.4
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 3.4
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 29 4.5
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 29 4.5
U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical pr... 29 4.5
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 29 4.5
AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical ... 29 4.5
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 29 5.9
AF045645-6|AAC02608.1| 314|Caenorhabditis elegans Collagen prot... 29 5.9
Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 28 7.8
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 28 7.8
AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen prot... 28 7.8
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 37.5 bits (83), Expect = 0.013
Identities = 23/71 (32%), Positives = 23/71 (32%)
Frame = +1
Query: 661 PPXLXFXXPPXPGGGXXPXFFXX*XTXXPPPGPXRXFXFWGXPSPXPPXTXXPXPXXXFX 840
PP PP P GG P PPPG P P PP P P
Sbjct: 720 PPITGGPPPPPPPGGLPP--ITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 777
Query: 841 XGXPRXPPPXP 873
G PPP P
Sbjct: 778 GGFKGGPPPPP 788
Score = 34.7 bits (76), Expect = 0.090
Identities = 24/74 (32%), Positives = 24/74 (32%), Gaps = 4/74 (5%)
Frame = +2
Query: 659 PPXXXPFXX-PXXPGGGXGXXFSXXKXPXPXPPGXXGXSFFGAPLPXXXPX---XXPPPX 826
PP P P P G P P PPG G P P P PPP
Sbjct: 716 PPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP 775
Query: 827 XXXSGXGGPAXPPP 868
GGP PPP
Sbjct: 776 PPGGFKGGPPPPPP 789
Score = 31.9 bits (69), Expect = 0.64
Identities = 18/47 (38%), Positives = 18/47 (38%)
Frame = +2
Query: 737 PXPXPPGXXGXSFFGAPLPXXXPXXXPPPXXXXSGXGGPAXPPPXXG 877
P P PPG G P P PPP GGP PPP G
Sbjct: 727 PPPPPPG-------GLPPITGGPPPPPPPGGLPPISGGPPPPPPPPG 766
Score = 31.1 bits (67), Expect = 1.1
Identities = 24/75 (32%), Positives = 25/75 (33%)
Frame = +2
Query: 653 LXPPXXXPFXXPXXPGGGXGXXFSXXKXPXPXPPGXXGXSFFGAPLPXXXPXXXPPPXXX 832
L PP P GG P P PPG + G P P P PP
Sbjct: 685 LPPPTKMNLSAPSTSAGGSSALPPITGGPPP-PPGLPPIT--GGPPPPPPPGGLPPIT-- 739
Query: 833 XSGXGGPAXPPPXXG 877
GGP PPP G
Sbjct: 740 ----GGPPPPPPPGG 750
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/54 (35%), Positives = 19/54 (35%)
Frame = +1
Query: 658 PPPXLXFXXPPXPGGGXXPXFFXX*XTXXPPPGPXRXFXFWGXPSPXPPXTXXP 819
PPP PP GG P PPP P F G P P PP P
Sbjct: 743 PPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFK-GGPPPPPPPGMFAP 795
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 37.5 bits (83), Expect = 0.013
Identities = 23/71 (32%), Positives = 23/71 (32%)
Frame = +1
Query: 661 PPXLXFXXPPXPGGGXXPXFFXX*XTXXPPPGPXRXFXFWGXPSPXPPXTXXPXPXXXFX 840
PP PP P GG P PPPG P P PP P P
Sbjct: 720 PPITGGPPPPPPPGGLPP--ITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 777
Query: 841 XGXPRXPPPXP 873
G PPP P
Sbjct: 778 GGFKGGPPPPP 788
Score = 34.7 bits (76), Expect = 0.090
Identities = 24/74 (32%), Positives = 24/74 (32%), Gaps = 4/74 (5%)
Frame = +2
Query: 659 PPXXXPFXX-PXXPGGGXGXXFSXXKXPXPXPPGXXGXSFFGAPLPXXXPX---XXPPPX 826
PP P P P G P P PPG G P P P PPP
Sbjct: 716 PPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP 775
Query: 827 XXXSGXGGPAXPPP 868
GGP PPP
Sbjct: 776 PPGGFKGGPPPPPP 789
Score = 31.9 bits (69), Expect = 0.64
Identities = 18/47 (38%), Positives = 18/47 (38%)
Frame = +2
Query: 737 PXPXPPGXXGXSFFGAPLPXXXPXXXPPPXXXXSGXGGPAXPPPXXG 877
P P PPG G P P PPP GGP PPP G
Sbjct: 727 PPPPPPG-------GLPPITGGPPPPPPPGGLPPISGGPPPPPPPPG 766
Score = 31.1 bits (67), Expect = 1.1
Identities = 24/75 (32%), Positives = 25/75 (33%)
Frame = +2
Query: 653 LXPPXXXPFXXPXXPGGGXGXXFSXXKXPXPXPPGXXGXSFFGAPLPXXXPXXXPPPXXX 832
L PP P GG P P PPG + G P P P PP
Sbjct: 685 LPPPTKMNLSAPSTSAGGSSALPPITGGPPP-PPGLPPIT--GGPPPPPPPGGLPPIT-- 739
Query: 833 XSGXGGPAXPPPXXG 877
GGP PPP G
Sbjct: 740 ----GGPPPPPPPGG 750
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/54 (35%), Positives = 19/54 (35%)
Frame = +1
Query: 658 PPPXLXFXXPPXPGGGXXPXFFXX*XTXXPPPGPXRXFXFWGXPSPXPPXTXXP 819
PPP PP GG P PPP P F G P P PP P
Sbjct: 743 PPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFK-GGPPPPPPPGMFAP 795
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 37.5 bits (83), Expect = 0.013
Identities = 23/71 (32%), Positives = 23/71 (32%)
Frame = +1
Query: 661 PPXLXFXXPPXPGGGXXPXFFXX*XTXXPPPGPXRXFXFWGXPSPXPPXTXXPXPXXXFX 840
PP PP P GG P PPPG P P PP P P
Sbjct: 303 PPITGGPPPPPPPGGLPP--ITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 360
Query: 841 XGXPRXPPPXP 873
G PPP P
Sbjct: 361 GGFKGGPPPPP 371
Score = 34.7 bits (76), Expect = 0.090
Identities = 24/74 (32%), Positives = 24/74 (32%), Gaps = 4/74 (5%)
Frame = +2
Query: 659 PPXXXPFXX-PXXPGGGXGXXFSXXKXPXPXPPGXXGXSFFGAPLPXXXPX---XXPPPX 826
PP P P P G P P PPG G P P P PPP
Sbjct: 299 PPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP 358
Query: 827 XXXSGXGGPAXPPP 868
GGP PPP
Sbjct: 359 PPGGFKGGPPPPPP 372
Score = 31.9 bits (69), Expect = 0.64
Identities = 18/47 (38%), Positives = 18/47 (38%)
Frame = +2
Query: 737 PXPXPPGXXGXSFFGAPLPXXXPXXXPPPXXXXSGXGGPAXPPPXXG 877
P P PPG G P P PPP GGP PPP G
Sbjct: 310 PPPPPPG-------GLPPITGGPPPPPPPGGLPPISGGPPPPPPPPG 349
Score = 31.1 bits (67), Expect = 1.1
Identities = 24/75 (32%), Positives = 25/75 (33%)
Frame = +2
Query: 653 LXPPXXXPFXXPXXPGGGXGXXFSXXKXPXPXPPGXXGXSFFGAPLPXXXPXXXPPPXXX 832
L PP P GG P P PPG + G P P P PP
Sbjct: 268 LPPPTKMNLSAPSTSAGGSSALPPITGGPPP-PPGLPPIT--GGPPPPPPPGGLPPIT-- 322
Query: 833 XSGXGGPAXPPPXXG 877
GGP PPP G
Sbjct: 323 ----GGPPPPPPPGG 333
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/54 (35%), Positives = 19/54 (35%)
Frame = +1
Query: 658 PPPXLXFXXPPXPGGGXXPXFFXX*XTXXPPPGPXRXFXFWGXPSPXPPXTXXP 819
PPP PP GG P PPP P F G P P PP P
Sbjct: 326 PPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFK-GGPPPPPPPGMFAP 378
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 34.7 bits (76), Expect = 0.090
Identities = 24/85 (28%), Positives = 27/85 (31%)
Frame = +2
Query: 623 GNPFXXGXNNLXPPXXXPFXXPXXPGGGXGXXFSXXKXPXPXPPGXXGXSFFGAPLPXXX 802
G P G PP P P P G G + + P PG + G P P
Sbjct: 199 GVPGPDGDAGSPPPPGPP--GPPGPPGNDGQPGAPGQDGQPGAPGTNTVNSPGGPGPAGP 256
Query: 803 PXXXPPPXXXXSGXGGPAXPPPXXG 877
P PP SG PP G
Sbjct: 257 PGPPGPPGQDGSGGAAQPGPPGPPG 281
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 33.9 bits (74), Expect = 0.16
Identities = 21/64 (32%), Positives = 21/64 (32%)
Frame = +2
Query: 686 PXXPGGGXGXXFSXXKXPXPXPPGXXGXSFFGAPLPXXXPXXXPPPXXXXSGXGGPAXPP 865
P PGG G K P PG G P P P P G GPA PP
Sbjct: 106 PPGPGGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCP-GGPPGPAGPAGPP 164
Query: 866 PXXG 877
G
Sbjct: 165 GPPG 168
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 33.9 bits (74), Expect = 0.16
Identities = 21/64 (32%), Positives = 21/64 (32%)
Frame = +2
Query: 686 PXXPGGGXGXXFSXXKXPXPXPPGXXGXSFFGAPLPXXXPXXXPPPXXXXSGXGGPAXPP 865
P PGG G K P PG G P P P P G GPA PP
Sbjct: 106 PPGPGGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCP-GGPPGPAGPAGPP 164
Query: 866 PXXG 877
G
Sbjct: 165 GPPG 168
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 33.9 bits (74), Expect = 0.16
Identities = 21/64 (32%), Positives = 21/64 (32%)
Frame = +2
Query: 686 PXXPGGGXGXXFSXXKXPXPXPPGXXGXSFFGAPLPXXXPXXXPPPXXXXSGXGGPAXPP 865
P PGG G K P PG G P P P P G GPA PP
Sbjct: 106 PPGPGGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCP-GGPPGPAGPAGPP 164
Query: 866 PXXG 877
G
Sbjct: 165 GPPG 168
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 33.9 bits (74), Expect = 0.16
Identities = 21/64 (32%), Positives = 21/64 (32%)
Frame = +2
Query: 686 PXXPGGGXGXXFSXXKXPXPXPPGXXGXSFFGAPLPXXXPXXXPPPXXXXSGXGGPAXPP 865
P PGG G K P PG G P P P P G GPA PP
Sbjct: 106 PPGPGGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCP-GGPPGPAGPAGPP 164
Query: 866 PXXG 877
G
Sbjct: 165 GPPG 168
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 32.7 bits (71), Expect = 0.36
Identities = 23/72 (31%), Positives = 24/72 (33%)
Frame = -2
Query: 872 GXGGGXRGXPXXXXXXGXGXXVXGGXGEGXPQKXKXRXGPGGGXXVXXXXKXXGXXPPPG 693
G GGG RG G G GG +G G GGG G PP
Sbjct: 95 GRGGGGRGDWGGNNNGGGGNWGGGGNNDGG---WGGNNGGGGGGRGGGGRGGDGRGPPGS 151
Query: 692 XGGXXKXXXGGG 657
GG GGG
Sbjct: 152 NGGGDWGGNGGG 163
Score = 28.3 bits (60), Expect = 7.8
Identities = 16/43 (37%), Positives = 16/43 (37%)
Frame = -2
Query: 872 GXGGGXRGXPXXXXXXGXGXXVXGGXGEGXPQKXKXRXGPGGG 744
G GGG RG G GG G G R G GGG
Sbjct: 135 GRGGGGRGGDGRGPPGSNGGGDWGGNGGGGRGGGGGRGGGGGG 177
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 32.7 bits (71), Expect = 0.36
Identities = 22/72 (30%), Positives = 24/72 (33%)
Frame = +1
Query: 658 PPPXLXFXXPPXPGGGXXPXFFXX*XTXXPPPGPXRXFXFWGXPSPXPPXTXXPXPXXXF 837
PPP PP P G + PPP P G +P PP T P
Sbjct: 35 PPPKGTGTPPPPPTGEPQDLSGEGNASRRPPPPPK------GTGTPPPPPTGEPQDLSAE 88
Query: 838 XXGXPRXPPPXP 873
R PPP P
Sbjct: 89 EGNASRRPPPPP 100
Score = 31.5 bits (68), Expect = 0.84
Identities = 22/70 (31%), Positives = 23/70 (32%)
Frame = +1
Query: 658 PPPXLXFXXPPXPGGGXXPXFFXX*XTXXPPPGPXRXFXFWGXPSPXPPXTXXPXPXXXF 837
PPP PP P G + PPP P G SP PP T P
Sbjct: 191 PPPKGTGTPPPPPTGEPQDLSAEGYASRRPPPPPK------GTGSPTPPPTGEPQDLSGE 244
Query: 838 XXGXPRXPPP 867
R PPP
Sbjct: 245 GNASRRPPPP 254
Score = 31.1 bits (67), Expect = 1.1
Identities = 22/70 (31%), Positives = 23/70 (32%)
Frame = +1
Query: 658 PPPXLXFXXPPXPGGGXXPXFFXX*XTXXPPPGPXRXFXFWGXPSPXPPXTXXPXPXXXF 837
PPP PP P G + PPP P G SP PP T P
Sbjct: 98 PPPKGTGTPPPPPTGEPQDLSGEGNASRRPPPPPK------GTGSPPPPPTGEPQDLSGE 151
Query: 838 XXGXPRXPPP 867
R PPP
Sbjct: 152 GNASRRPPPP 161
Score = 31.1 bits (67), Expect = 1.1
Identities = 22/70 (31%), Positives = 23/70 (32%)
Frame = +1
Query: 658 PPPXLXFXXPPXPGGGXXPXFFXX*XTXXPPPGPXRXFXFWGXPSPXPPXTXXPXPXXXF 837
PPP PP P G + PPP P G SP PP T P
Sbjct: 129 PPPKGTGSPPPPPTGEPQDLSGEGNASRRPPPPPK------GTGSPPPPPTGEPQDLSTE 182
Query: 838 XXGXPRXPPP 867
R PPP
Sbjct: 183 GNASRRPPPP 192
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 32.3 bits (70), Expect = 0.48
Identities = 22/69 (31%), Positives = 22/69 (31%)
Frame = +1
Query: 658 PPPXLXFXXPPXPGGGXXPXFFXX*XTXXPPPGPXRXFXFWGXPSPXPPXTXXPXPXXXF 837
PPP PP PG G P PPP P G P P P P P
Sbjct: 66 PPPVPNGFIPPPPGPGGIPPPPPMFAGGIPPPPP----MMGGIPPPPPMFGAPPPPPPPS 121
Query: 838 XXGXPRXPP 864
G PP
Sbjct: 122 GLGVAPQPP 130
>Z70753-10|CAD44125.1| 296|Caenorhabditis elegans Hypothetical
protein F40F9.1a protein.
Length = 296
Score = 31.9 bits (69), Expect = 0.64
Identities = 17/44 (38%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Frame = +3
Query: 156 YEPIDNRPYIVN--PPKDYNPNGNGYEPIDNGAYYVXPPPFPGA 281
Y P PY PP +N G+G GAY+ PPP GA
Sbjct: 8 YNPAYQNPYPNQGPPPPGFN-TGDGQNQNQGGAYFSPPPPMHGA 50
>Z70753-1|CAD44126.1| 296|Caenorhabditis elegans Hypothetical
protein F40F9.1b protein.
Length = 296
Score = 31.9 bits (69), Expect = 0.64
Identities = 17/44 (38%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Frame = +3
Query: 156 YEPIDNRPYIVN--PPKDYNPNGNGYEPIDNGAYYVXPPPFPGA 281
Y P PY PP +N G+G GAY+ PPP GA
Sbjct: 8 YNPAYQNPYPNQGPPPPGFN-TGDGQNQNQGGAYFSPPPPMHGA 50
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 31.9 bits (69), Expect = 0.64
Identities = 23/66 (34%), Positives = 23/66 (34%), Gaps = 1/66 (1%)
Frame = +2
Query: 662 PXXXPFXXPXXPGGGXGXX-FSXXKXPXPXPPGXXGXSFFGAPLPXXXPXXXPPPXXXXS 838
P P P P G S P P PP G GA P PPP S
Sbjct: 605 PHAVPPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAP------PPPPPPPPS 658
Query: 839 GXGGPA 856
G GGPA
Sbjct: 659 GAGGPA 664
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/45 (37%), Positives = 18/45 (40%), Gaps = 3/45 (6%)
Frame = +2
Query: 743 PXPPGXXGXSFFGAPLPXXXPXXXPPP---XXXXSGXGGPAXPPP 868
P PP SF AP+ P PPP G G P PPP
Sbjct: 610 PPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPP 654
Score = 31.1 bits (67), Expect = 1.1
Identities = 15/43 (34%), Positives = 16/43 (37%)
Frame = +1
Query: 745 PPPGPXRXFXFWGXPSPXPPXTXXPXPXXXFXXGXPRXPPPXP 873
PPP P + F S PP P P G PPP P
Sbjct: 612 PPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPP 654
Score = 29.1 bits (62), Expect = 4.5
Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = +3
Query: 144 QGNGYEPIDNRPYIVNPPKDYNPNGN-GYEPIDNGAYYVXPPPFP 275
Q Y +NRP+ V PP P + G PI + A PPP P
Sbjct: 594 QAPNYGTPENRPHAVPPPPPPPPPQSFGMAPISSAAPPPPPPPPP 638
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 31.9 bits (69), Expect = 0.64
Identities = 23/66 (34%), Positives = 23/66 (34%), Gaps = 1/66 (1%)
Frame = +2
Query: 662 PXXXPFXXPXXPGGGXGXX-FSXXKXPXPXPPGXXGXSFFGAPLPXXXPXXXPPPXXXXS 838
P P P P G S P P PP G GA P PPP S
Sbjct: 431 PHAVPPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAP------PPPPPPPPS 484
Query: 839 GXGGPA 856
G GGPA
Sbjct: 485 GAGGPA 490
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/45 (37%), Positives = 18/45 (40%), Gaps = 3/45 (6%)
Frame = +2
Query: 743 PXPPGXXGXSFFGAPLPXXXPXXXPPP---XXXXSGXGGPAXPPP 868
P PP SF AP+ P PPP G G P PPP
Sbjct: 436 PPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPP 480
Score = 31.1 bits (67), Expect = 1.1
Identities = 15/43 (34%), Positives = 16/43 (37%)
Frame = +1
Query: 745 PPPGPXRXFXFWGXPSPXPPXTXXPXPXXXFXXGXPRXPPPXP 873
PPP P + F S PP P P G PPP P
Sbjct: 438 PPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPP 480
Score = 29.1 bits (62), Expect = 4.5
Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = +3
Query: 144 QGNGYEPIDNRPYIVNPPKDYNPNGN-GYEPIDNGAYYVXPPPFP 275
Q Y +NRP+ V PP P + G PI + A PPP P
Sbjct: 420 QAPNYGTPENRPHAVPPPPPPPPPQSFGMAPISSAAPPPPPPPPP 464
>AF039047-13|AAM15587.1| 402|Caenorhabditis elegans Coexpressed
with polycystins protein4 protein.
Length = 402
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +1
Query: 121 LCWLWPTLKETATNLLTTARTSLILPKTTTLMETATNLSTTV 246
LC+LW L T T TT T+ + TTT + +TTV
Sbjct: 179 LCYLWVPLTTTTTTTTTTTTTTSPMNTTTTTVLINGTTTTTV 220
>Z79694-6|CAB01958.1| 316|Caenorhabditis elegans Hypothetical
protein C15A11.6 protein.
Length = 316
Score = 30.7 bits (66), Expect = 1.5
Identities = 22/68 (32%), Positives = 22/68 (32%), Gaps = 4/68 (5%)
Frame = +2
Query: 686 PXXPGGGXGXXFSXXKXPXPXPPGXXGXSFFGAPLPXXXPXXXPPPXXXXS-GXG---GP 853
P P G G P PG G G P P P PP G G GP
Sbjct: 173 PPGPAGSAGSPGQAGAPGNPGSPGKSGQRGRGLPGPSGAPGSQGPPGAPGQPGSGNAPGP 232
Query: 854 AXPPPXXG 877
A PP G
Sbjct: 233 AGPPGPAG 240
>Z79694-5|CAB01961.1| 316|Caenorhabditis elegans Hypothetical
protein C15A11.5 protein.
Length = 316
Score = 30.7 bits (66), Expect = 1.5
Identities = 22/68 (32%), Positives = 22/68 (32%), Gaps = 4/68 (5%)
Frame = +2
Query: 686 PXXPGGGXGXXFSXXKXPXPXPPGXXGXSFFGAPLPXXXPXXXPPPXXXXS-GXG---GP 853
P P G G P PG G G P P P PP G G GP
Sbjct: 173 PPGPAGSAGSPGQAGAPGNPGSPGKSGQRGRGLPGPSGAPGPQGPPGAPGQPGSGNAPGP 232
Query: 854 AXPPPXXG 877
A PP G
Sbjct: 233 AGPPGPAG 240
>Z75542-6|CAA99864.3| 552|Caenorhabditis elegans Hypothetical
protein F55D12.5 protein.
Length = 552
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = +1
Query: 133 WPTLKETATNLLTTARTSLILPKTTTLMETATNLSTTVXIT 255
WP ET TT T+ +P TTT+ T T +T T
Sbjct: 298 WPLPAETVPAPKTTTTTTTTVPSTTTITTTTTQRTTPYTTT 338
>Z75538-3|CAA99842.3| 552|Caenorhabditis elegans Hypothetical
protein F55D12.5 protein.
Length = 552
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = +1
Query: 133 WPTLKETATNLLTTARTSLILPKTTTLMETATNLSTTVXIT 255
WP ET TT T+ +P TTT+ T T +T T
Sbjct: 298 WPLPAETVPAPKTTTTTTTTVPSTTTITTTTTQRTTPYTTT 338
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 30.7 bits (66), Expect = 1.5
Identities = 22/64 (34%), Positives = 24/64 (37%)
Frame = +2
Query: 686 PXXPGGGXGXXFSXXKXPXPXPPGXXGXSFFGAPLPXXXPXXXPPPXXXXSGXGGPAXPP 865
P PGG G + K P PG G S GA P P PP +G GP P
Sbjct: 121 PPGPGGRPGKPGTPGK---PGAPGNPGASGKGAAAP-CEPSTPPPCQPCPAGPPGPPGPD 176
Query: 866 PXXG 877
G
Sbjct: 177 GTPG 180
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 30.7 bits (66), Expect = 1.5
Identities = 22/76 (28%), Positives = 22/76 (28%), Gaps = 2/76 (2%)
Frame = -1
Query: 849 PPXPEXXXXGGGXXXGXXXGRGAPKXE--XPXXPGGXGXGXLXXEKXXPXPPPGXXGXXK 676
P P GGG G G G P PG G G PPPG G
Sbjct: 151 PTGPPPLMGGGGDPRGPPGGMGGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGGPGG 210
Query: 675 GKXXGGXKLFXPXXXG 628
GG P G
Sbjct: 211 PGGPGGPGGMLPKSHG 226
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 30.7 bits (66), Expect = 1.5
Identities = 22/76 (28%), Positives = 22/76 (28%), Gaps = 2/76 (2%)
Frame = -1
Query: 849 PPXPEXXXXGGGXXXGXXXGRGAPKXE--XPXXPGGXGXGXLXXEKXXPXPPPGXXGXXK 676
P P GGG G G G P PG G G PPPG G
Sbjct: 431 PTGPPPLMGGGGDPRGPPGGMGGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGGPGG 490
Query: 675 GKXXGGXKLFXPXXXG 628
GG P G
Sbjct: 491 PGGPGGPGGMLPKSHG 506
>Z95559-4|CAB09004.1| 110|Caenorhabditis elegans Hypothetical
protein Y41E3.8 protein.
Length = 110
Score = 30.3 bits (65), Expect = 1.9
Identities = 15/45 (33%), Positives = 17/45 (37%)
Frame = -2
Query: 818 GXXVXGGXGEGXPQKXKXRXGPGGGXXVXXXXKXXGXXPPPGXGG 684
G V G G G + G GGG + G PPP GG
Sbjct: 58 GGGVNGAGGGGNAYRRNGGGGGGGGRNIGGLPTSSGVAPPPMGGG 102
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 30.3 bits (65), Expect = 1.9
Identities = 25/80 (31%), Positives = 25/80 (31%), Gaps = 10/80 (12%)
Frame = -1
Query: 867 GGGXAGPPXPEXXXXG----------GGXXXGXXXGRGAPKXEXPXXPGGXGXGXLXXEK 718
GGG A PP P G GG G G G GG G G
Sbjct: 49 GGGCAPPPPPPACGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGCGGG 108
Query: 717 XXPXPPPGXXGXXKGKXXGG 658
P PPP G G GG
Sbjct: 109 CAPPPPPPACGGGCGGGGGG 128
Score = 29.1 bits (62), Expect = 4.5
Identities = 18/48 (37%), Positives = 18/48 (37%), Gaps = 1/48 (2%)
Frame = -1
Query: 876 PWXGGGXAGPPXPEXXXXGGGXXXGXXXGRG-APKXEXPXXPGGXGXG 736
P GGG G GGG G G G AP P GG G G
Sbjct: 21 PSGGGGGGGGGCGGGCGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGG 68
Score = 28.7 bits (61), Expect = 5.9
Identities = 22/73 (30%), Positives = 22/73 (30%)
Frame = -2
Query: 866 GGGXRGXPXXXXXXGXGXXVXGGXGEGXPQKXKXRXGPGGGXXVXXXXKXXGXXPPPGXG 687
GGG G G G GG G G G GGG G PPP
Sbjct: 62 GGGCGGGGGGCGGGGGGCGGGGGCGGGG-----GGCGGGGGGCGGGGGCGGGCAPPPPPP 116
Query: 686 GXXKXXXGGGXSC 648
GGG C
Sbjct: 117 ACGGGCGGGGGGC 129
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 30.3 bits (65), Expect = 1.9
Identities = 21/63 (33%), Positives = 22/63 (34%)
Frame = +1
Query: 685 PPXPGGGXXPXFFXX*XTXXPPPGPXRXFXFWGXPSPXPPXTXXPXPXXXFXXGXPRXPP 864
PP P G P T PPP P +P PP P P G P PP
Sbjct: 505 PPPPLLGIAPM-----STNAPPPPPMPGMAPLSTGAPTPP----PPPPVGMANGGPPPPP 555
Query: 865 PXP 873
P P
Sbjct: 556 PLP 558
Score = 29.9 bits (64), Expect = 2.6
Identities = 17/42 (40%), Positives = 18/42 (42%)
Frame = +2
Query: 743 PXPPGXXGXSFFGAPLPXXXPXXXPPPXXXXSGXGGPAXPPP 868
P PP G APL P PPP + GGP PPP
Sbjct: 520 PPPPPMPGM----APLSTGAPTPPPPPPVGMAN-GGPPPPPP 556
>Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical
protein C09G5.5 protein.
Length = 317
Score = 30.3 bits (65), Expect = 1.9
Identities = 22/68 (32%), Positives = 22/68 (32%), Gaps = 4/68 (5%)
Frame = +2
Query: 686 PXXPGGGXGXXFSXXKXPXPXPPGXXGXSFFGAPLPXXXPXXXPPPXXXXS-GXG---GP 853
P P G G P PG G G P P P PP G G GP
Sbjct: 171 PPGPAGDAGSPGQAGAPGNPGRPGQSGQRSRGLPGPSGRPGPQGPPGAPGQPGSGSTPGP 230
Query: 854 AXPPPXXG 877
A PP G
Sbjct: 231 AGPPGPPG 238
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 3 protein.
Length = 302
Score = 30.3 bits (65), Expect = 1.9
Identities = 22/64 (34%), Positives = 24/64 (37%)
Frame = +2
Query: 686 PXXPGGGXGXXFSXXKXPXPXPPGXXGXSFFGAPLPXXXPXXXPPPXXXXSGXGGPAXPP 865
P P G G + + P PPG GA LP P PP G GPA PP
Sbjct: 115 PPGPPGRDGRPGAPGRPGNPGPPGRD-----GALLP--GPPPKPPCQKCPPGPPGPAGPP 167
Query: 866 PXXG 877
G
Sbjct: 168 GPKG 171
>U14635-8|AAK84492.1| 307|Caenorhabditis elegans Collagen protein
36 protein.
Length = 307
Score = 30.3 bits (65), Expect = 1.9
Identities = 18/61 (29%), Positives = 21/61 (34%)
Frame = -2
Query: 866 GGGXRGXPXXXXXXGXGXXVXGGXGEGXPQKXKXRXGPGGGXXVXXXXKXXGXXPPPGXG 687
G G G P G V G G P+ K GP G + + G PP G
Sbjct: 210 GVGEPGPPGPAGQPGRVIQVNGAAGPAGPRGVKGPPGPKGLPGIAGLTEIGGQGPPGDAG 269
Query: 686 G 684
G
Sbjct: 270 G 270
Score = 29.9 bits (64), Expect = 2.6
Identities = 20/65 (30%), Positives = 23/65 (35%), Gaps = 1/65 (1%)
Frame = +2
Query: 686 PXXPGGGXGXXFSXXKXPXPXPPGXXGXSFFGAPLPXXXPXXXPPPXXXXS-GXGGPAXP 862
P P G G + P PG G S + LP P PP + G GP P
Sbjct: 122 PPGPAGDTGPNGNDGHHGAPGVPGKEG-SILSSALPPSEPCIICPPGPQGAVGQQGPKGP 180
Query: 863 PPXXG 877
P G
Sbjct: 181 PGPKG 185
>L15418-1|AAA17445.1| 307|Caenorhabditis elegans col-36 collagen
protein.
Length = 307
Score = 30.3 bits (65), Expect = 1.9
Identities = 18/61 (29%), Positives = 21/61 (34%)
Frame = -2
Query: 866 GGGXRGXPXXXXXXGXGXXVXGGXGEGXPQKXKXRXGPGGGXXVXXXXKXXGXXPPPGXG 687
G G G P G V G G P+ K GP G + + G PP G
Sbjct: 210 GVGEPGPPGPAGQPGRVIQVNGAAGPAGPRGVKGPPGPKGLPGIAGLTEIGGQGPPGDAG 269
Query: 686 G 684
G
Sbjct: 270 G 270
Score = 29.9 bits (64), Expect = 2.6
Identities = 20/65 (30%), Positives = 23/65 (35%), Gaps = 1/65 (1%)
Frame = +2
Query: 686 PXXPGGGXGXXFSXXKXPXPXPPGXXGXSFFGAPLPXXXPXXXPPPXXXXS-GXGGPAXP 862
P P G G + P PG G S + LP P PP + G GP P
Sbjct: 122 PPGPAGDTGPNGNDGHHGAPGVPGKEG-SILSSALPPSEPCIICPPGPQGAVGQQGPKGP 180
Query: 863 PPXXG 877
P G
Sbjct: 181 PGPKG 185
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +2
Query: 785 PLPXXXPXXXPPPXXXXSGXGGPAXPPPXXG 877
PLP PPP GGP PPP G
Sbjct: 567 PLPQNLSGAPPPPPPPPPMLGGPPPPPPPPG 597
>Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical
protein B0035.1b protein.
Length = 341
Score = 29.9 bits (64), Expect = 2.6
Identities = 23/74 (31%), Positives = 25/74 (33%), Gaps = 2/74 (2%)
Frame = +1
Query: 658 PPPXLXFXXPPXPGGGXXPXFFXX*XTXXPPPG-PXRXFXFWGXPSPXPPXTXXPXPXXX 834
PPP + + PP P G P PP G P P P P P P
Sbjct: 134 PPPSMAYGMPPMPSGMMPPRGMP--GAYPPPRGYPPAPAPGVYMPPPGMPGA-YPPPRMP 190
Query: 835 FXXGXPRXPP-PXP 873
G P PP P P
Sbjct: 191 IGHGPPGGPPMPGP 204
>Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical
protein B0035.1a protein.
Length = 298
Score = 29.9 bits (64), Expect = 2.6
Identities = 23/74 (31%), Positives = 25/74 (33%), Gaps = 2/74 (2%)
Frame = +1
Query: 658 PPPXLXFXXPPXPGGGXXPXFFXX*XTXXPPPG-PXRXFXFWGXPSPXPPXTXXPXPXXX 834
PPP + + PP P G P PP G P P P P P P
Sbjct: 134 PPPSMAYGMPPMPSGMMPPRGMP--GAYPPPRGYPPAPAPGVYMPPPGMPGA-YPPPRMP 190
Query: 835 FXXGXPRXPP-PXP 873
G P PP P P
Sbjct: 191 IGHGPPGGPPMPGP 204
>U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protein
33 protein.
Length = 304
Score = 29.9 bits (64), Expect = 2.6
Identities = 19/64 (29%), Positives = 20/64 (31%)
Frame = +2
Query: 686 PXXPGGGXGXXFSXXKXPXPXPPGXXGXSFFGAPLPXXXPXXXPPPXXXXSGXGGPAXPP 865
P P G G K P PG G P+ P PP G GP PP
Sbjct: 109 PAGPAGAPGNPGRPGKPGAPGLPGNPGKP----PVQPCEPITPPPCKPCPDGPAGPPGPP 164
Query: 866 PXXG 877
G
Sbjct: 165 GAPG 168
Score = 29.1 bits (62), Expect = 4.5
Identities = 21/64 (32%), Positives = 22/64 (34%)
Frame = +2
Query: 686 PXXPGGGXGXXFSXXKXPXPXPPGXXGXSFFGAPLPXXXPXXXPPPXXXXSGXGGPAXPP 865
P PGG + K P P PPG G AP P P G GP PP
Sbjct: 176 PGAPGGDAPPGEAGPKGP-PGPPGSPG-----APGEPGRPGDDAPSEPLIPGEPGPQGPP 229
Query: 866 PXXG 877
G
Sbjct: 230 GPPG 233
>AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen protein
68 protein.
Length = 329
Score = 29.9 bits (64), Expect = 2.6
Identities = 21/61 (34%), Positives = 22/61 (36%)
Frame = +2
Query: 686 PXXPGGGXGXXFSXXKXPXPXPPGXXGXSFFGAPLPXXXPXXXPPPXXXXSGXGGPAXPP 865
P P G G S P PPG G GAP P PP +G G PP
Sbjct: 266 PIGPPGQPGAPGSSQPGPQ-GPPGDPGID--GAPGNPGSPGEPGPPGQPGAGGGCDHCPP 322
Query: 866 P 868
P
Sbjct: 323 P 323
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 29.9 bits (64), Expect = 2.6
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = +2
Query: 737 PXPXPPGXXGXSFFGAPLPXXXPXXXPPPXXXXSGXGGPAXPPP 868
P P PPG G P P PPP G A PPP
Sbjct: 717 PAPPPPGVGPPPPQGIP-PMGFDPNKPPPPMFQQGFNAGAPPPP 759
Score = 29.9 bits (64), Expect = 2.6
Identities = 17/50 (34%), Positives = 18/50 (36%)
Frame = +2
Query: 719 FSXXKXPXPXPPGXXGXSFFGAPLPXXXPXXXPPPXXXXSGXGGPAXPPP 868
F+ P P G S F P P PPP G GG PPP
Sbjct: 751 FNAGAPPPPFGRGAGPMSSFPPP-PRGGMHHMPPPPSFRGGRGGHGGPPP 799
>U13070-20|AAN63418.1| 641|Caenorhabditis elegans Hypothetical
protein F01F1.1c protein.
Length = 641
Score = 29.5 bits (63), Expect = 3.4
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +3
Query: 189 NPPKDYNPNGNGYEPIDNGAYYVXPPPFP 275
NPP Y G G+ P G+ + PPP P
Sbjct: 57 NPPSAYGQFGGGFHPSTWGSGPIVPPPPP 85
>U13070-18|AAC46635.2| 646|Caenorhabditis elegans Hypothetical
protein F01F1.1a protein.
Length = 646
Score = 29.5 bits (63), Expect = 3.4
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +3
Query: 189 NPPKDYNPNGNGYEPIDNGAYYVXPPPFP 275
NPP Y G G+ P G+ + PPP P
Sbjct: 62 NPPSAYGQFGGGFHPSTWGSGPIVPPPPP 90
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.5 bits (63), Expect = 3.4
Identities = 21/73 (28%), Positives = 22/73 (30%)
Frame = +2
Query: 659 PPXXXPFXXPXXPGGGXGXXFSXXKXPXPXPPGXXGXSFFGAPLPXXXPXXXPPPXXXXS 838
PP P P G G P P G G+P P PPP
Sbjct: 238 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPR---- 293
Query: 839 GXGGPAXPPPXXG 877
G P PPP G
Sbjct: 294 -AGSPPPPPPPRG 305
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.5 bits (63), Expect = 3.4
Identities = 21/73 (28%), Positives = 22/73 (30%)
Frame = +2
Query: 659 PPXXXPFXXPXXPGGGXGXXFSXXKXPXPXPPGXXGXSFFGAPLPXXXPXXXPPPXXXXS 838
PP P P G G P P G G+P P PPP
Sbjct: 259 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPR---- 314
Query: 839 GXGGPAXPPPXXG 877
G P PPP G
Sbjct: 315 -AGSPPPPPPPRG 326
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.5 bits (63), Expect = 3.4
Identities = 21/73 (28%), Positives = 22/73 (30%)
Frame = +2
Query: 659 PPXXXPFXXPXXPGGGXGXXFSXXKXPXPXPPGXXGXSFFGAPLPXXXPXXXPPPXXXXS 838
PP P P G G P P G G+P P PPP
Sbjct: 244 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPR---- 299
Query: 839 GXGGPAXPPPXXG 877
G P PPP G
Sbjct: 300 -AGSPPPPPPPRG 311
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical
protein F23H12.4 protein.
Length = 301
Score = 29.1 bits (62), Expect = 4.5
Identities = 18/64 (28%), Positives = 20/64 (31%)
Frame = +2
Query: 686 PXXPGGGXGXXFSXXKXPXPXPPGXXGXSFFGAPLPXXXPXXXPPPXXXXSGXGGPAXPP 865
P P G G + P PG G P+ P PP G GP PP
Sbjct: 106 PPGPAGAPGKPGKPGRPGAPGTPGTPGK----PPVAPCEPTTPPPCKPCPQGPPGPPGPP 161
Query: 866 PXXG 877
G
Sbjct: 162 GAPG 165
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 29.1 bits (62), Expect = 4.5
Identities = 18/64 (28%), Positives = 20/64 (31%)
Frame = +2
Query: 686 PXXPGGGXGXXFSXXKXPXPXPPGXXGXSFFGAPLPXXXPXXXPPPXXXXSGXGGPAXPP 865
P P G G + P PG G P+ P PP G GP PP
Sbjct: 101 PPGPAGAPGKPGKPGRPGAPGTPGTPGK----PPVAPCEPTTPPPCKPCPQGPPGPPGPP 156
Query: 866 PXXG 877
G
Sbjct: 157 GAPG 160
>U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical
protein F41F3.3 protein.
Length = 156
Score = 29.1 bits (62), Expect = 4.5
Identities = 20/58 (34%), Positives = 20/58 (34%)
Frame = +2
Query: 695 PGGGXGXXFSXXKXPXPXPPGXXGXSFFGAPLPXXXPXXXPPPXXXXSGXGGPAXPPP 868
P GG G P P P G G G LP P P G GG PPP
Sbjct: 20 PSGGGGGCGCAPPPPPPSPCGCGGGG--GLALPQLPPLSLP-----SLGGGGGCCPPP 70
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 29.1 bits (62), Expect = 4.5
Identities = 18/64 (28%), Positives = 20/64 (31%)
Frame = +2
Query: 686 PXXPGGGXGXXFSXXKXPXPXPPGXXGXSFFGAPLPXXXPXXXPPPXXXXSGXGGPAXPP 865
P P G G + P PG G P+ P PP G GP PP
Sbjct: 101 PPGPAGAPGKPGKPGRPGAPGTPGTPGK----PPVAPCEPTTPPPCKPCPQGPPGPPGPP 156
Query: 866 PXXG 877
G
Sbjct: 157 GAPG 160
>AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical
protein Y40B1A.5 protein.
Length = 134
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/43 (37%), Positives = 16/43 (37%)
Frame = +2
Query: 737 PXPXPPGXXGXSFFGAPLPXXXPXXXPPPXXXXSGXGGPAXPP 865
P PPG G F G P P PP G G P PP
Sbjct: 61 PSTMPPGPHGMPFMGGPPPHHQYHLQYPP---PHGLGPPPPPP 100
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 28.7 bits (61), Expect = 5.9
Identities = 19/61 (31%), Positives = 20/61 (32%)
Frame = -1
Query: 804 GXXXGRGAPKXEXPXXPGGXGXGXLXXEKXXPXPPPGXXGXXKGKXXGGXKLFXPXXXGF 625
G G G P P PGG G PP G G GG + P GF
Sbjct: 398 GAPQGPGGPGGYGPPPPGGPGAPGSYG------PPQGGPGGFGPPPPGGPGAYGPPPTGF 451
Query: 624 P 622
P
Sbjct: 452 P 452
>AF045645-6|AAC02608.1| 314|Caenorhabditis elegans Collagen protein
101 protein.
Length = 314
Score = 28.7 bits (61), Expect = 5.9
Identities = 25/86 (29%), Positives = 26/86 (30%), Gaps = 1/86 (1%)
Frame = +2
Query: 623 GNPFXXGXNNLXP-PXXXPFXXPXXPGGGXGXXFSXXKXPXPXPPGXXGXSFFGAPLPXX 799
GNP +N P F P P G G P PG G GA LP
Sbjct: 150 GNPGQDAQDNQPAGPDSFCFDCPAGPPGPSGAPGQKGPSGAPGQPGRSG----GASLPGP 205
Query: 800 XPXXXPPPXXXXSGXGGPAXPPPXXG 877
PP G G A P G
Sbjct: 206 PGPAGPPGPSGQPGSNGNAGAPGAPG 231
>Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical
protein H06A10.2 protein.
Length = 305
Score = 28.3 bits (60), Expect = 7.8
Identities = 19/64 (29%), Positives = 19/64 (29%)
Frame = +2
Query: 686 PXXPGGGXGXXFSXXKXPXPXPPGXXGXSFFGAPLPXXXPXXXPPPXXXXSGXGGPAXPP 865
P PGG G K P PG G AP P P G GP P
Sbjct: 111 PPGPGGSPGKPGKPGKPGAPGAPGAAGKG-ASAPCEAKTPPPCQPCPAGPPGPPGPDGPA 169
Query: 866 PXXG 877
G
Sbjct: 170 GPAG 173
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 28.3 bits (60), Expect = 7.8
Identities = 16/43 (37%), Positives = 16/43 (37%)
Frame = -2
Query: 872 GXGGGXRGXPXXXXXXGXGXXVXGGXGEGXPQKXKXRXGPGGG 744
G GGG RG G G GG G G G GGG
Sbjct: 23 GYGGGGRGGGGGGYSGGRGGGYGGGGGGGYGGGGYGGGGRGGG 65
>Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical
protein F56H9.6 protein.
Length = 245
Score = 28.3 bits (60), Expect = 7.8
Identities = 16/43 (37%), Positives = 18/43 (41%)
Frame = +1
Query: 139 TLKETATNLLTTARTSLILPKTTTLMETATNLSTTVXITWXLP 267
T T T TT+ T+ P TTT T STT T P
Sbjct: 60 TTTTTPTTTSTTSTTTTTTPTTTTTTTPTTTTSTTSTTTTTTP 102
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 28.3 bits (60), Expect = 7.8
Identities = 23/85 (27%), Positives = 26/85 (30%), Gaps = 1/85 (1%)
Frame = +1
Query: 622 WEPXXXRXKQLXP-PPXLXFXXPPXPGGGXXPXFFXX*XTXXPPPGPXRXFXFWGXPSPX 798
W P P PP + PP P P PPP P + G P P
Sbjct: 296 WPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGG---MPPPPPPGMRYP-GGMPPPP 351
Query: 799 PPXTXXPXPXXXFXXGXPRXPPPXP 873
PP P + P PP P
Sbjct: 352 PPRYPSAGP-GMYPPPPPSRPPAPP 375
Score = 28.3 bits (60), Expect = 7.8
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = +2
Query: 737 PXPXPPGXXGXSFFGAPLPXXXPXXXPPPXXXXSGXGGPAXPPP 868
P P PPG G P P PP G GG PPP
Sbjct: 299 PPPPPPGRTP----GPPGMPGMPPPPPPSRFGPPGMGGMPPPPP 338
>Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical
protein F17C8.2 protein.
Length = 296
Score = 28.3 bits (60), Expect = 7.8
Identities = 22/74 (29%), Positives = 22/74 (29%), Gaps = 1/74 (1%)
Frame = +2
Query: 659 PPXXXPFXXPXXPGGGXGXXFSXXKXPXPXPPGXXGXSF-FGAPLPXXXPXXXPPPXXXX 835
PP P G G K P PPG G S G P P
Sbjct: 154 PPGPEGPAGPAGSDGQPGAPGDAGKDGPPGPPGPDGDSGPNGEAGPNGEPGAPGKDGEKG 213
Query: 836 SGXGGPAXPPPXXG 877
G GPA PP G
Sbjct: 214 KGEPGPAGPPGPPG 227
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.3 bits (60), Expect = 7.8
Identities = 18/44 (40%), Positives = 18/44 (40%)
Frame = -1
Query: 867 GGGXAGPPXPEXXXXGGGXXXGXXXGRGAPKXEXPXXPGGXGXG 736
GGG A PP P GGG G AP P P G G G
Sbjct: 45 GGGCAPPPAPCGGGCGGGGGGCGGGGGCAP----PPAPCGGGCG 84
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.3 bits (60), Expect = 7.8
Identities = 18/44 (40%), Positives = 18/44 (40%)
Frame = -1
Query: 867 GGGXAGPPXPEXXXXGGGXXXGXXXGRGAPKXEXPXXPGGXGXG 736
GGG A PP P GGG G AP P P G G G
Sbjct: 45 GGGCAPPPAPCGGGCGGGGGGCGGGGGCAP----PPAPCGGGCG 84
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 28.3 bits (60), Expect = 7.8
Identities = 23/85 (27%), Positives = 26/85 (30%), Gaps = 1/85 (1%)
Frame = +1
Query: 622 WEPXXXRXKQLXP-PPXLXFXXPPXPGGGXXPXFFXX*XTXXPPPGPXRXFXFWGXPSPX 798
W P P PP + PP P P PPP P + G P P
Sbjct: 306 WPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGG---MPPPPPPGMRYP-GGMPPPP 361
Query: 799 PPXTXXPXPXXXFXXGXPRXPPPXP 873
PP P + P PP P
Sbjct: 362 PPRYPSAGP-GMYPPPPPSRPPAPP 385
Score = 28.3 bits (60), Expect = 7.8
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = +2
Query: 737 PXPXPPGXXGXSFFGAPLPXXXPXXXPPPXXXXSGXGGPAXPPP 868
P P PPG G P P PP G GG PPP
Sbjct: 309 PPPPPPGRTP----GPPGMPGMPPPPPPSRFGPPGMGGMPPPPP 348
>AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen protein
50 protein.
Length = 418
Score = 28.3 bits (60), Expect = 7.8
Identities = 24/79 (30%), Positives = 26/79 (32%), Gaps = 6/79 (7%)
Frame = +2
Query: 659 PPXXXPFXXPXXPGG-----GXGXXFSXXKXPXPX-PPGXXGXSFFGAPLPXXXPXXXPP 820
PP P P G G G ++ P PPG G GAP P P
Sbjct: 172 PPGPDGNAGPAGPAGAAGPDGEGAGYAEPGPAGPAGPPGPDGQP--GAPGPDGQPGAGGT 229
Query: 821 PXXXXSGXGGPAXPPPXXG 877
G GPA PP G
Sbjct: 230 TSTNQPGPPGPAGPPGPAG 248
Score = 28.3 bits (60), Expect = 7.8
Identities = 15/46 (32%), Positives = 17/46 (36%), Gaps = 1/46 (2%)
Frame = +2
Query: 743 PXPPGXXGXSFFGAPLPXXXPX-XXPPPXXXXSGXGGPAXPPPXXG 877
P P G G + P P P PP +G GPA P G
Sbjct: 244 PGPAGPAGEDAYAQPSPAGTPGPPGPPGKDGEAGPDGPAGAPGTDG 289
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,758,391
Number of Sequences: 27780
Number of extensions: 392926
Number of successful extensions: 1777
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 844
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1470
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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