Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP08_F_G09
         (894 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    23   3.8  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   3.8  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   3.8  
AY569709-1|AAS86662.1|  408|Apis mellifera complementary sex det...    22   6.6  

>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 12/43 (27%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
 Frame = +3

Query: 225 YEPI-DNGAYYVXPPPFPGARGGK*RIS*KINNEIMY*QYISK 350
           Y P+  +G YYV   PF  ++ G+  +  + + +I+  Q ++K
Sbjct: 265 YSPLASHGLYYVNTAPFMKSQFGENNVQYQGSEDILNTQSLAK 307


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 11/32 (34%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
 Frame = +3

Query: 105 MIFVLALLAMANAQGNGYEPIDNRP-YIVNPP 197
           +IFV A  A+ +A G+G++     P +++ PP
Sbjct: 6   LIFVGAAAAVTSAGGHGFDAHLRGPSFVMEPP 37


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 11/32 (34%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
 Frame = +3

Query: 105 MIFVLALLAMANAQGNGYEPIDNRP-YIVNPP 197
           +IFV A  A+ +A G+G++     P +++ PP
Sbjct: 6   LIFVGAAAAVTSAGGHGFDAHLRGPSFVMEPP 37


>AY569709-1|AAS86662.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = +3

Query: 201 DYNPNGNGYEPIDNGAYYVXPPPFP 275
           +YN   N Y+P+     Y+   P P
Sbjct: 323 NYNNYNNNYKPLHYNINYIEQIPVP 347


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 220,410
Number of Sequences: 438
Number of extensions: 6984
Number of successful extensions: 32
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28904421
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)