Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP08_F_G07
         (866 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-173|AAF52078.2|  246|Drosophila melanogaster CG14661-PA...    33   0.39 
AY071299-1|AAL48921.1|  249|Drosophila melanogaster RE32803p pro...    33   0.51 
AE014297-174|AAF52077.1|  249|Drosophila melanogaster CG2016-PB ...    33   0.51 

>AE014297-173|AAF52078.2|  246|Drosophila melanogaster CG14661-PA
           protein.
          Length = 246

 Score = 33.5 bits (73), Expect = 0.39
 Identities = 18/61 (29%), Positives = 28/61 (45%)
 Frame = +1

Query: 193 CLSSAXXXFLEXTXKGXPQYDXWPIDPLVVTSLDVXAPNDAGVVXRFKNLNITGLKNXXI 372
           CL S+         KG  + +  P++PL +  L +     AG+  + K LNI G  N  I
Sbjct: 40  CLKSSVHNLRPYLAKGIKELNVPPLEPLYIGDLSI-LDGSAGLTVKAKKLNILGASNFEI 98

Query: 373 S 375
           +
Sbjct: 99  T 99


>AY071299-1|AAL48921.1|  249|Drosophila melanogaster RE32803p
           protein.
          Length = 249

 Score = 33.1 bits (72), Expect = 0.51
 Identities = 15/67 (22%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
 Frame = +1

Query: 193 CLSSAXXXFLEXTXKGXPQYDXWPIDPLVVTSLD-VXAPNDAGVVXRFKNLNITGLKNXX 369
           CL  +    +    KG P+ D + I+P+++  +  V      G    F+N+   G+ N  
Sbjct: 39  CLRESGNKLVHYLQKGVPELDIYEIEPVMIDEIGIVLGSGPDGYRALFRNIQAYGVSNIT 98

Query: 370 ISDFQMD 390
           +++ + D
Sbjct: 99  VTNIRSD 105


>AE014297-174|AAF52077.1|  249|Drosophila melanogaster CG2016-PB
           protein.
          Length = 249

 Score = 33.1 bits (72), Expect = 0.51
 Identities = 15/67 (22%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
 Frame = +1

Query: 193 CLSSAXXXFLEXTXKGXPQYDXWPIDPLVVTSLD-VXAPNDAGVVXRFKNLNITGLKNXX 369
           CL  +    +    KG P+ D + I+P+++  +  V      G    F+N+   G+ N  
Sbjct: 39  CLRESGNKLVHYLQKGVPELDIYEIEPVMIDEIGIVLGSGPDGYRALFRNIQAYGVSNIT 98

Query: 370 ISDFQMD 390
           +++ + D
Sbjct: 99  VTNIRSD 105


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,418,012
Number of Sequences: 53049
Number of extensions: 267695
Number of successful extensions: 274
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 274
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 274
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4188579408
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)