Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP08_F_G05
(894 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79754-10|CAB02099.1| 181|Caenorhabditis elegans Hypothetical p... 97 1e-20
AF101316-3|AAC69232.2| 508|Caenorhabditis elegans Hypothetical ... 29 3.4
Z81054-12|CAB61006.1| 1781|Caenorhabditis elegans Hypothetical p... 29 5.9
Z81037-8|CAI79129.1| 217|Caenorhabditis elegans Hypothetical pr... 29 5.9
Z81032-6|CAB60991.1| 1781|Caenorhabditis elegans Hypothetical pr... 29 5.9
AF038576-1|AAC38973.1| 1781|Caenorhabditis elegans CED-5 protein. 29 5.9
Z81072-15|CAB03026.2| 1262|Caenorhabditis elegans Hypothetical p... 28 7.8
Z81048-10|CAB02845.2| 1262|Caenorhabditis elegans Hypothetical p... 28 7.8
U40958-3|ABQ13075.1| 219|Caenorhabditis elegans Hypothetical pr... 28 7.8
>Z79754-10|CAB02099.1| 181|Caenorhabditis elegans Hypothetical
protein F25H2.11 protein.
Length = 181
Score = 97.1 bits (231), Expect = 1e-20
Identities = 47/113 (41%), Positives = 69/113 (61%), Gaps = 2/113 (1%)
Frame = +3
Query: 132 MXXXKXIITGXXXFSDTYKMKLVDXVIYXVTGRLVTRAQGDIQIEGFNPSAEEA--DEGT 305
M K I T SD++ MKLVD ++Y G+ V R +G+I + G NPSAEE D+G+
Sbjct: 1 MLIYKDIFTDDELSSDSFPMKLVDDLVYEFKGKHVVRKEGEIVLAGSNPSAEEGAEDDGS 60
Query: 306 DSAVESGVDIVLNHRLVETYAFGDKKSYTLYLKDYMKKLVAKLEEKAPDQVEV 464
D VE G+DIVLNH+LVE + D + Y+K +MK ++ +E+ D+ +V
Sbjct: 61 DEHVERGIDIVLNHKLVEMNCYEDASMFKAYIKKFMKNVIDHMEKNNRDKADV 113
Score = 49.2 bits (112), Expect = 4e-06
Identities = 24/49 (48%), Positives = 31/49 (63%), Gaps = 3/49 (6%)
Frame = +1
Query: 508 RFKELQFFTGESMDC---DGMVAMMEYRDFDGTQIPIMMFFKHGLXEEK 645
RFK L FF GE +G VA++EYRD DGT++P +M K + EEK
Sbjct: 132 RFKNLAFFIGERAAEGAENGQVAIIEYRDVDGTEVPTLMLVKEAIIEEK 180
>AF101316-3|AAC69232.2| 508|Caenorhabditis elegans Hypothetical
protein F52F10.2 protein.
Length = 508
Score = 29.5 bits (63), Expect = 3.4
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -2
Query: 485 FVHVCFKYFNLVRRLLFQFCY*FFHI 408
F+++C +Y RR L FCY F I
Sbjct: 137 FIYLCIEYLPTGRRYLMMFCYILFDI 162
>Z81054-12|CAB61006.1| 1781|Caenorhabditis elegans Hypothetical
protein C02F4.1 protein.
Length = 1781
Score = 28.7 bits (61), Expect = 5.9
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +3
Query: 378 KKSYTLYLKDYMKKLVAKLEEK 443
+K+Y YL+++MK LVA + EK
Sbjct: 754 EKTYKQYLREFMKSLVALMSEK 775
>Z81037-8|CAI79129.1| 217|Caenorhabditis elegans Hypothetical
protein C17E4.11 protein.
Length = 217
Score = 28.7 bits (61), Expect = 5.9
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 6/67 (8%)
Frame = -2
Query: 623 LKNIMIGIC---VPSKSLYSIMATMPSQSMDSPVKN*S-SLNLXE--DVFHYFVHVCFKY 462
L+NI IC P+ S+ T P + + ++ + S+ + E D FHY+V+VC K
Sbjct: 136 LENIFSSICRVLKPNGIFISVSFTQPHFRIPALLREKNWSVEMFEFGDTFHYYVYVCRKG 195
Query: 461 FNLVRRL 441
+L + L
Sbjct: 196 NSLNKEL 202
>Z81032-6|CAB60991.1| 1781|Caenorhabditis elegans Hypothetical
protein C02F4.1 protein.
Length = 1781
Score = 28.7 bits (61), Expect = 5.9
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +3
Query: 378 KKSYTLYLKDYMKKLVAKLEEK 443
+K+Y YL+++MK LVA + EK
Sbjct: 754 EKTYKQYLREFMKSLVALMSEK 775
>AF038576-1|AAC38973.1| 1781|Caenorhabditis elegans CED-5 protein.
Length = 1781
Score = 28.7 bits (61), Expect = 5.9
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +3
Query: 378 KKSYTLYLKDYMKKLVAKLEEK 443
+K+Y YL+++MK LVA + EK
Sbjct: 754 EKTYKQYLREFMKSLVALMSEK 775
>Z81072-15|CAB03026.2| 1262|Caenorhabditis elegans Hypothetical
protein F30A10.10 protein.
Length = 1262
Score = 28.3 bits (60), Expect = 7.8
Identities = 15/27 (55%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = +3
Query: 270 FNPSAEEADEGTDSAVESG-VDIVLNH 347
F+PSA +ADE D A E G VD L H
Sbjct: 1236 FSPSASQADETGDRAPERGFVDTALAH 1262
>Z81048-10|CAB02845.2| 1262|Caenorhabditis elegans Hypothetical
protein F30A10.10 protein.
Length = 1262
Score = 28.3 bits (60), Expect = 7.8
Identities = 15/27 (55%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = +3
Query: 270 FNPSAEEADEGTDSAVESG-VDIVLNH 347
F+PSA +ADE D A E G VD L H
Sbjct: 1236 FSPSASQADETGDRAPERGFVDTALAH 1262
>U40958-3|ABQ13075.1| 219|Caenorhabditis elegans Hypothetical
protein F09F9.5 protein.
Length = 219
Score = 28.3 bits (60), Expect = 7.8
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -2
Query: 437 FQFCY*FFHIVFEVQCVGFLVTEGVCF 357
+Q C+ F H+ +GF GVCF
Sbjct: 53 YQTCFGFMHVKIATCSIGFFALLGVCF 79
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,663,432
Number of Sequences: 27780
Number of extensions: 291623
Number of successful extensions: 724
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 709
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 723
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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