Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP08_F_F22
         (885 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    26   0.34 
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    26   0.34 
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    22   5.6  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    22   7.4  
AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine 3-mon...    21   9.7  
AY052623-1|AAL15471.1|  101|Tribolium castaneum kynurenine 3-mon...    21   9.7  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    21   9.7  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    21   9.7  

>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 26.2 bits (55), Expect = 0.34
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = -1

Query: 375 TDNTLLTCSNLYFLYRSPHGVGLFK*TPDGLFPKYVRTAS 256
           T N L T S+   LY +   V  F  +   +FP Y+RT S
Sbjct: 33  TSNYLYTPSSTIDLYNTS-SVSNFNESSSSVFPNYIRTTS 71


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 26.2 bits (55), Expect = 0.34
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = -1

Query: 375 TDNTLLTCSNLYFLYRSPHGVGLFK*TPDGLFPKYVRTAS 256
           T N L T S+   LY +   V  F  +   +FP Y+RT S
Sbjct: 33  TSNYLYTPSSTIDLYNTS-SVSNFNESSSSVFPNYIRTTS 71


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -1

Query: 648 IDSVTSSLWPQVDVYEKPVLPLTLVNITF 562
           ID +  +   +V VY+ PVL L L   T+
Sbjct: 114 IDKIFKTRDDRVKVYQAPVLQLFLYIFTY 142


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 7/63 (11%)
 Frame = -3

Query: 346 FVLLVQIAPWRWTFQ-VDSGRTLPKIRSHCVLQ-----IVIVNIKL-SDVIVGYQINLHT 188
           FV + Q+  W    + +   +     R  CV++      V  + KL S  + G  INL T
Sbjct: 455 FVTMTQVIQWIQNPRTITESKNFEPWREKCVVEGNPHCWVPHSCKLTSKEVPGETINLQT 514

Query: 187 CVR 179
           CVR
Sbjct: 515 CVR 517


>AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 212

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 9/28 (32%), Positives = 13/28 (46%)
 Frame = -3

Query: 640 SDLFALAPSRRVREACLTAHFGEHYVYI 557
           +D F + PS  V   C   H G  ++ I
Sbjct: 41  NDFFKVKPSALVSVKCKPYHVGSKFLLI 68


>AY052623-1|AAL15471.1|  101|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 101

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 9/28 (32%), Positives = 13/28 (46%)
 Frame = -3

Query: 640 SDLFALAPSRRVREACLTAHFGEHYVYI 557
           +D F + PS  V   C   H G  ++ I
Sbjct: 56  NDFFKVKPSALVSVKCKPYHVGSKFLLI 83


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 9/28 (32%), Positives = 13/28 (46%)
 Frame = -3

Query: 640 SDLFALAPSRRVREACLTAHFGEHYVYI 557
           +D F + PS  V   C   H G  ++ I
Sbjct: 274 NDFFKVKPSALVSVKCKPYHVGSKFLLI 301


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 9/28 (32%), Positives = 13/28 (46%)
 Frame = -3

Query: 640 SDLFALAPSRRVREACLTAHFGEHYVYI 557
           +D F + PS  V   C   H G  ++ I
Sbjct: 274 NDFFKVKPSALVSVKCKPYHVGSKFLLI 301


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,115
Number of Sequences: 336
Number of extensions: 3567
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24513621
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)