Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP08_F_F17
         (895 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT022751-1|AAY55167.1|  572|Drosophila melanogaster IP14661p pro...    30   4.9  
AY089307-1|AAL90045.1|  572|Drosophila melanogaster AT11139p pro...    30   4.9  
AE013599-2157|AAF58079.1|  572|Drosophila melanogaster CG8388-PA...    30   4.9  
BT016125-1|AAV37010.1|  500|Drosophila melanogaster GM16860p pro...    29   6.5  
M97196-1|AAA28396.1|  510|Drosophila melanogaster DNA-binding pr...    29   8.6  
BT022177-1|AAY51571.1|  278|Drosophila melanogaster IP01247p pro...    29   8.6  
AE014134-793|AAF50966.2|  510|Drosophila melanogaster CG11924-PA...    29   8.6  
AE013599-1892|AAF58248.1|  278|Drosophila melanogaster CG17385-P...    29   8.6  

>BT022751-1|AAY55167.1|  572|Drosophila melanogaster IP14661p
           protein.
          Length = 572

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = +2

Query: 65  AICCSKNFAKTVNLRSYLK-HEYFKIFLCFYCGNVSG 172
           A+CC++ F K   L  +L+ H+  + F C  CG V G
Sbjct: 261 AMCCNRKFLKRGVLVDHLRRHQDPETFKCSICGRVMG 297


>AY089307-1|AAL90045.1|  572|Drosophila melanogaster AT11139p
           protein.
          Length = 572

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = +2

Query: 65  AICCSKNFAKTVNLRSYLK-HEYFKIFLCFYCGNVSG 172
           A+CC++ F K   L  +L+ H+  + F C  CG V G
Sbjct: 261 AMCCNRKFLKRGVLVDHLRRHQDPETFKCSICGRVMG 297


>AE013599-2157|AAF58079.1|  572|Drosophila melanogaster CG8388-PA
           protein.
          Length = 572

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = +2

Query: 65  AICCSKNFAKTVNLRSYLK-HEYFKIFLCFYCGNVSG 172
           A+CC++ F K   L  +L+ H+  + F C  CG V G
Sbjct: 261 AMCCNRKFLKRGVLVDHLRRHQDPETFKCSICGRVMG 297


>BT016125-1|AAV37010.1|  500|Drosophila melanogaster GM16860p
           protein.
          Length = 500

 Score = 29.5 bits (63), Expect = 6.5
 Identities = 21/73 (28%), Positives = 29/73 (39%), Gaps = 1/73 (1%)
 Frame = +2

Query: 74  CSKNFAKTVNLRSYLK-HEYFKIFLCFYCGNVSGVM*YSRSSKNTYQGH*DCRKGSR*RS 250
           C K+F ++  L+ + + H   K F C YCG    V  Y      T+ G          +S
Sbjct: 406 CGKSFTQSNTLKQHTRIHTGEKPFRCGYCGRAFTVKDYLNKHLTTHTGEKQYFSNQFSQS 465

Query: 251 KSHQYRQYSQRCF 289
            S Q  Q   R F
Sbjct: 466 ISSQSTQPINRLF 478


>M97196-1|AAA28396.1|  510|Drosophila melanogaster DNA-binding
           protein isoform I protein.
          Length = 510

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
 Frame = +2

Query: 74  CSKNFAKTVNLRSYLK-HEYFKIFLCFYCGNVSGVM*YSRSSKNTYQG 214
           C K+F ++  L+ + + H   K F C YCG    V  Y      T+ G
Sbjct: 406 CGKSFTQSNTLKQHTRIHTGEKPFRCGYCGRAFTVKDYLNKHLTTHTG 453


>BT022177-1|AAY51571.1|  278|Drosophila melanogaster IP01247p
           protein.
          Length = 278

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = +2

Query: 74  CSKNFAKTVNL-RSYLKHEYFKIFLCFYC 157
           CSK FA+ VNL R Y  H   + F C +C
Sbjct: 79  CSKAFAQAVNLQRHYAVHSGERPFTCNFC 107


>AE014134-793|AAF50966.2|  510|Drosophila melanogaster CG11924-PA,
           isoform A protein.
          Length = 510

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
 Frame = +2

Query: 74  CSKNFAKTVNLRSYLK-HEYFKIFLCFYCGNVSGVM*YSRSSKNTYQG 214
           C K+F ++  L+ + + H   K F C YCG    V  Y      T+ G
Sbjct: 406 CGKSFTQSNTLKQHTRIHTGEKPFRCGYCGRAFTVKDYLNKHLTTHTG 453


>AE013599-1892|AAF58248.1|  278|Drosophila melanogaster CG17385-PA
           protein.
          Length = 278

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = +2

Query: 74  CSKNFAKTVNL-RSYLKHEYFKIFLCFYC 157
           CSK FA+ VNL R Y  H   + F C +C
Sbjct: 79  CSKAFAQAVNLQRHYAVHSGERPFTCNFC 107


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,197,621
Number of Sequences: 53049
Number of extensions: 364226
Number of successful extensions: 857
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 806
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 853
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4341591036
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)