Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP08_F_F08
         (887 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_06_0537 + 34585339-34585581,34585668-34585862,34585964-34586845     30   2.1  
02_02_0497 + 10961079-10963824,10964182-10964282,10964759-109648...    29   4.9  
03_02_0520 + 9092020-9092079,9092253-9093047                           29   6.5  
04_01_0423 - 5597068-5597109,5597181-5597309,5597490-5598431           28   8.6  

>03_06_0537 + 34585339-34585581,34585668-34585862,34585964-34586845
          Length = 439

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 19/64 (29%), Positives = 26/64 (40%), Gaps = 2/64 (3%)
 Frame = -2

Query: 373 FIRDLVEKVVNSGY--FCLMVSLLVQALRHSVLDVFSLRDVPAAELLRRWTFSSRGADPA 200
           F+ D    +  SG+  + LM+     ALR +V   F         L R W FS  G  P 
Sbjct: 9   FVVDCGRTIFFSGFNAYWLMMMAADPALRGAVATAFQQASAHGLNLARTWAFSDGGDQPL 68

Query: 199 VPTP 188
             +P
Sbjct: 69  QSSP 72


>02_02_0497 +
           10961079-10963824,10964182-10964282,10964759-10964800,
           10966918-10966986
          Length = 985

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 21/69 (30%), Positives = 29/69 (42%)
 Frame = -1

Query: 632 ERGGXADHGTDQSCRGISIAGGILRNPIARFREVXAHXASGVCLVGTVLDAVTHGVSVFV 453
           ER    DH    S     +A G+  N +A    V +  A   C  G  L    HG++V V
Sbjct: 64  ERAVGGDHYGCTSLLRWMLARGLRPNRLALAAAVKSSSALPDCRGGAALGRCLHGLAVKV 123

Query: 452 DFADTSCAA 426
            +AD +  A
Sbjct: 124 GYADGAVVA 132


>03_02_0520 + 9092020-9092079,9092253-9093047
          Length = 284

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 10/24 (41%), Positives = 18/24 (75%)
 Frame = -2

Query: 286 VLDVFSLRDVPAAELLRRWTFSSR 215
           VLD+ +++ +PA  +L+RWT  +R
Sbjct: 138 VLDLMNIKSLPAQYILKRWTREAR 161


>04_01_0423 - 5597068-5597109,5597181-5597309,5597490-5598431
          Length = 370

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 15/45 (33%), Positives = 26/45 (57%)
 Frame = -2

Query: 349 VVNSGYFCLMVSLLVQALRHSVLDVFSLRDVPAAELLRRWTFSSR 215
           + + G F  +  L   AL+  VLD+ ++  +PA  +L+RWT  +R
Sbjct: 177 ICSCGQFNRIGILCGHALK--VLDLMNIESLPAQYILKRWTREAR 219


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,264,411
Number of Sequences: 37544
Number of extensions: 366169
Number of successful extensions: 847
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 834
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 846
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)