Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP08_F_F08
         (887 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071738-1|AAL49360.1|  304|Drosophila melanogaster RH45818p pro...    57   4e-08
AJ133736-1|CAB39319.1|  304|Drosophila melanogaster BM-40 protein.     57   4e-08
AE014297-4005|AAF56632.2|  304|Drosophila melanogaster CG6378-PA...    57   4e-08
BT011035-1|AAR30195.1|  760|Drosophila melanogaster RE44586p pro...    30   4.9  
AE013599-588|AAF59136.1|  760|Drosophila melanogaster CG11210-PA...    30   4.9  

>AY071738-1|AAL49360.1|  304|Drosophila melanogaster RH45818p
           protein.
          Length = 304

 Score = 56.8 bits (131), Expect = 4e-08
 Identities = 22/55 (40%), Positives = 27/55 (49%)
 Frame = +2

Query: 536 HETWQSDCEVYRXRCLCLDNSDQCRGPXYHHVXIEYYXTCRXMPXCTESXMSDFP 700
           +ETW SDC VY+ RC C      C  P   H+ I+YY  C     C    + DFP
Sbjct: 126 NETWPSDCSVYQQRCWCDSGEPGCTNPDNAHMHIDYYGACHEPRSCEGEDLKDFP 180



 Score = 47.2 bits (107), Expect = 3e-05
 Identities = 18/36 (50%), Positives = 25/36 (69%)
 Frame = +3

Query: 426 CSAGRVCEINEHGDAMCNCIXDCPYETDSRRXVCTN 533
           C AGR+C++++     C CI +CP E D+RR VCTN
Sbjct: 90  CGAGRICQMHDE-KPKCVCIPECPEEVDTRRLVCTN 124


>AJ133736-1|CAB39319.1|  304|Drosophila melanogaster BM-40 protein.
          Length = 304

 Score = 56.8 bits (131), Expect = 4e-08
 Identities = 22/55 (40%), Positives = 27/55 (49%)
 Frame = +2

Query: 536 HETWQSDCEVYRXRCLCLDNSDQCRGPXYHHVXIEYYXTCRXMPXCTESXMSDFP 700
           +ETW SDC VY+ RC C      C  P   H+ I+YY  C     C    + DFP
Sbjct: 126 NETWPSDCSVYQQRCWCDSGEPGCTNPDNAHMHIDYYGACHEPRSCEGEDLKDFP 180



 Score = 47.2 bits (107), Expect = 3e-05
 Identities = 18/36 (50%), Positives = 25/36 (69%)
 Frame = +3

Query: 426 CSAGRVCEINEHGDAMCNCIXDCPYETDSRRXVCTN 533
           C AGR+C++++     C CI +CP E D+RR VCTN
Sbjct: 90  CGAGRICQMHDE-KPKCVCIPECPEEVDTRRLVCTN 124


>AE014297-4005|AAF56632.2|  304|Drosophila melanogaster CG6378-PA
           protein.
          Length = 304

 Score = 56.8 bits (131), Expect = 4e-08
 Identities = 22/55 (40%), Positives = 27/55 (49%)
 Frame = +2

Query: 536 HETWQSDCEVYRXRCLCLDNSDQCRGPXYHHVXIEYYXTCRXMPXCTESXMSDFP 700
           +ETW SDC VY+ RC C      C  P   H+ I+YY  C     C    + DFP
Sbjct: 126 NETWPSDCSVYQQRCWCDSGEPGCTNPDNAHMHIDYYGACHEPRSCEGEDLKDFP 180



 Score = 47.2 bits (107), Expect = 3e-05
 Identities = 18/36 (50%), Positives = 25/36 (69%)
 Frame = +3

Query: 426 CSAGRVCEINEHGDAMCNCIXDCPYETDSRRXVCTN 533
           C AGR+C++++     C CI +CP E D+RR VCTN
Sbjct: 90  CGAGRICQMHDE-KPKCVCIPECPEEVDTRRLVCTN 124


>BT011035-1|AAR30195.1|  760|Drosophila melanogaster RE44586p
           protein.
          Length = 760

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
 Frame = -2

Query: 355 EKVVNSGYFCLMVSLLVQALRHSVLDVFSLRDVPAAELLRRWT--FSSRGADPAVPTPHT 182
           E ++ +  F +++ LL   LRH   D   L  V +    +RWT  F SR A    P P T
Sbjct: 31  ETLILNTIFWVLLILLFTVLRHQAGDFGRLALVNSNGSKKRWTEIFYSRAASVVDPQPST 90

Query: 181 TS 176
           ++
Sbjct: 91  ST 92


>AE013599-588|AAF59136.1|  760|Drosophila melanogaster CG11210-PA
           protein.
          Length = 760

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
 Frame = -2

Query: 355 EKVVNSGYFCLMVSLLVQALRHSVLDVFSLRDVPAAELLRRWT--FSSRGADPAVPTPHT 182
           E ++ +  F +++ LL   LRH   D   L  V +    +RWT  F SR A    P P T
Sbjct: 31  ETLILNTIFWVLLILLFTVLRHQAGDFGRLALVNSNGSKKRWTEIFYSRAASVVDPQPST 90

Query: 181 TS 176
           ++
Sbjct: 91  ST 92


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,417,531
Number of Sequences: 53049
Number of extensions: 567596
Number of successful extensions: 1243
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1163
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1235
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4332305172
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)