Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP08_F_F08
         (887 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L21758-1|AAA16827.1|  264|Caenorhabditis elegans osteonectin pro...    52   4e-07
AF036692-3|AAB88325.1|  264|Caenorhabditis elegans Osteonectin (...    52   4e-07
U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical p...    31   0.83 
AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synapt...    31   0.83 
U64833-11|AAB04822.2|  615|Caenorhabditis elegans Hypothetical p...    29   3.4  

>L21758-1|AAA16827.1|  264|Caenorhabditis elegans osteonectin
           protein.
          Length = 264

 Score = 52.4 bits (120), Expect = 4e-07
 Identities = 23/63 (36%), Positives = 33/63 (52%)
 Frame = +2

Query: 536 HETWQSDCEVYRXRCLCLDNSDQCRGPXYHHVXIEYYXTCRXMPXCTESXMSDFPPPHAG 715
           ++T+ S C++YR RCLC   S +C       V +EY   C+ +  CTE  M+ FP   A 
Sbjct: 96  NQTFTSLCDLYRERCLCKRKSKECSKAFNAKVHLEYLGECKKLDECTEEHMAQFPERMAD 155

Query: 716 LXF 724
             F
Sbjct: 156 WLF 158



 Score = 33.1 bits (72), Expect = 0.27
 Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
 Frame = +3

Query: 426 CSAGRVCEINEHGDAMCNCIXDCP-YETDSRRXVCTN 533
           C  G+ C + + G+  C CI  CP  + D    VC N
Sbjct: 58  CGWGKECVVGKKGEPTCECISKCPELDGDPMDKVCAN 94


>AF036692-3|AAB88325.1|  264|Caenorhabditis elegans Osteonectin
           (sparc) related protein1 protein.
          Length = 264

 Score = 52.4 bits (120), Expect = 4e-07
 Identities = 23/63 (36%), Positives = 33/63 (52%)
 Frame = +2

Query: 536 HETWQSDCEVYRXRCLCLDNSDQCRGPXYHHVXIEYYXTCRXMPXCTESXMSDFPPPHAG 715
           ++T+ S C++YR RCLC   S +C       V +EY   C+ +  CTE  M+ FP   A 
Sbjct: 96  NQTFTSLCDLYRERCLCKRKSKECSKAFNAKVHLEYLGECKKLDECTEEHMAQFPERMAD 155

Query: 716 LXF 724
             F
Sbjct: 156 WLF 158



 Score = 33.1 bits (72), Expect = 0.27
 Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
 Frame = +3

Query: 426 CSAGRVCEINEHGDAMCNCIXDCP-YETDSRRXVCTN 533
           C  G+ C + + G+  C CI  CP  + D    VC N
Sbjct: 58  CGWGKECVVGKKGEPTCECISKCPELDGDPMDKVCAN 94


>U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical
           protein F41G3.12 protein.
          Length = 1483

 Score = 31.5 bits (68), Expect = 0.83
 Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
 Frame = +3

Query: 426 CSAGRVCEINEHGDAMCNCIXDCP-YETDSRRXVC 527
           C     C + E+  A C C  DCP YE +  + VC
Sbjct: 518 CDFYSACVVGENEKAECKCPDDCPSYEMEEGKEVC 552


>AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synaptic
           protein) homologfamily member protein.
          Length = 1473

 Score = 31.5 bits (68), Expect = 0.83
 Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
 Frame = +3

Query: 426 CSAGRVCEINEHGDAMCNCIXDCP-YETDSRRXVC 527
           C     C + E+  A C C  DCP YE +  + VC
Sbjct: 526 CDFYSACVVGENEKAECKCPDDCPSYEMEEGKEVC 560


>U64833-11|AAB04822.2|  615|Caenorhabditis elegans Hypothetical
           protein B0507.1 protein.
          Length = 615

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 12/34 (35%), Positives = 13/34 (38%)
 Frame = +3

Query: 426 CSAGRVCEINEHGDAMCNCIXDCPYETDSRRXVC 527
           CS G  C     G+ MC C  D  Y   S    C
Sbjct: 215 CSGGAACICGARGNCMCECATDFGYTLASDGKTC 248


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,614,514
Number of Sequences: 27780
Number of extensions: 261340
Number of successful extensions: 664
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 637
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 664
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2244863852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)