Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP08_F_F06
         (896 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF283275-1|AAG15376.1|  133|Anopheles gambiae small heat shock p...    67   6e-13
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            24   7.2  
DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide...    23   9.5  

>AF283275-1|AAG15376.1|  133|Anopheles gambiae small heat shock
           protein protein.
          Length = 133

 Score = 67.3 bits (157), Expect = 6e-13
 Identities = 29/67 (43%), Positives = 40/67 (59%)
 Frame = +1

Query: 406 LQEMGSKITSNDEKFQVNIDVQHFSPDEINXXXXXXXXXXXXXXXXXQDQHGYVSRQFIR 585
           + + GS +  + +KFQ+N+DVQ FSP+EI+                 QD HGYVSR F+R
Sbjct: 1   MHDSGSAVNISKDKFQINLDVQQFSPEEISVKYVDNCVLVEGKHEEKQDDHGYVSRHFVR 60

Query: 586 RYALPQG 606
           RY LP+G
Sbjct: 61  RYMLPKG 67



 Score = 45.2 bits (102), Expect = 3e-06
 Identities = 22/48 (45%), Positives = 29/48 (60%)
 Frame = +2

Query: 602 KGCLPDTVESKLSSDGVLTVTAPKVLALPSTGEKIVPITHTGPVMKKV 745
           KG     + S LSSDG+LT+T P+        E+ +PITHTG  MK+V
Sbjct: 66  KGHNEADIVSSLSSDGILTITCPRKEIEQKNEERSIPITHTGQPMKQV 113


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 23.8 bits (49), Expect = 7.2
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = -1

Query: 755 PEIRPSSSQDQYVLLEQSFHQSKVRLAP 672
           P+  PSS QD  +L ++  H S V LAP
Sbjct: 482 PQKPPSSVQDLRIL-QKKVHGSVVNLAP 508


>DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide F
           receptor protein.
          Length = 575

 Score = 23.4 bits (48), Expect = 9.5
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -3

Query: 705 IFSPVEGKASTLGAVTVRT 649
           + +PV G  S +GAVTV T
Sbjct: 1   MLTPVSGLVSLVGAVTVAT 19


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 802,477
Number of Sequences: 2352
Number of extensions: 15097
Number of successful extensions: 27
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 96747534
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)