Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP08_F_F05
         (875 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_1008 - 7987936-7988628,7988923-7989102                           33   0.40 
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   8.5  
10_02_0167 - 6100676-6102111,6102174-6102708,6102967-6103975,610...    28   8.5  
01_01_1201 + 9678893-9679311,9679415-9679721                           28   8.5  

>01_01_1008 - 7987936-7988628,7988923-7989102
          Length = 290

 Score = 32.7 bits (71), Expect = 0.40
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = -1

Query: 722 RKRHASRREKGGQVSGKRQGRXQESARGSFQGETPG 615
           R R   RR  GG+V+G+   R +   RG+++GE  G
Sbjct: 239 RVRRRGRRGGGGEVNGEEAARSRRRRRGAWEGEEEG 274


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +2

Query: 299 NESAN---ARGEAVCVLGALPLPRSLTRCAR 382
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


>10_02_0167 -
           6100676-6102111,6102174-6102708,6102967-6103975,
           6104006-6105036
          Length = 1336

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = -2

Query: 736 QREL*ESATLPEGRKAD-RYPVSGRVGXRRAHEGASRGKRLVS 611
           QREL   AT P     D R  ++GR   RR  + A+R +R VS
Sbjct: 32  QRELPRQATPPPRGTGDLRDQINGRRKARRTRDDANRSRRHVS 74


>01_01_1201 + 9678893-9679311,9679415-9679721
          Length = 241

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
 Frame = -1

Query: 779 AQLGANDXHRTEIPTA*AMRKRHASRREKGGQVSGKRQGRXQESAR---GSFQGETPG 615
           A +  +   R E     A  + HA+RR++ G   G   G  QESAR   G+ + + PG
Sbjct: 2   ASMQKSREERAEAAAHRAADELHAARRDEPGGGGGGMLGTVQESARSLLGAVRDKIPG 59


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,991,903
Number of Sequences: 37544
Number of extensions: 459583
Number of successful extensions: 1275
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1240
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1275
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2467979640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)