Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP08_F_F04
         (880 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    24   1.8  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    23   2.4  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    23   4.2  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    23   4.2  
EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport pe...    21   9.7  
EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport pe...    21   9.7  
EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport pe...    21   9.7  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = +2

Query: 389  DLRNMQRVHQVTNGWEDIGYSFAVGGEGTVFEGR 490
            +LRN    HQ  N   ++ Y F V    T+ EG+
Sbjct: 1259 NLRNQNLSHQAKNLDSNLKYEFWVTAATTIGEGQ 1292


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +2

Query: 263 REEWGARPPTMTSPLKVSPVPIVVIHHSYIPKICL 367
           +E WG R       + V  VP+VV+  +Y   IC+
Sbjct: 195 QEPWGKRAYVTWYSISVFMVPLVVLIFTY-TSICI 228


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 11/16 (68%), Positives = 14/16 (87%)
 Frame = +2

Query: 167 RLLFITMSLISIVTAL 214
           +LL IT++ ISIVTAL
Sbjct: 286 QLLRITVAFISIVTAL 301


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 11/16 (68%), Positives = 14/16 (87%)
 Frame = +2

Query: 167 RLLFITMSLISIVTAL 214
           +LL IT++ ISIVTAL
Sbjct: 286 QLLRITVAFISIVTAL 301


>EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport
           peptide isoform C protein.
          Length = 136

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -2

Query: 135 FTAQRYYNIQCFHFCDRSI 79
           FT + +++IQC    D+SI
Sbjct: 43  FTKRSFFDIQCKGVYDKSI 61


>EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport
           peptide isoform B protein.
          Length = 120

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -2

Query: 135 FTAQRYYNIQCFHFCDRSI 79
           FT + +++IQC    D+SI
Sbjct: 43  FTKRSFFDIQCKGVYDKSI 61


>EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport
           peptide isoform A protein.
          Length = 140

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -2

Query: 135 FTAQRYYNIQCFHFCDRSI 79
           FT + +++IQC    D+SI
Sbjct: 43  FTKRSFFDIQCKGVYDKSI 61


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,278
Number of Sequences: 336
Number of extensions: 3731
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24306755
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)