Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP08_F_F02
         (860 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     22   7.2  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    21   9.5  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    21   9.5  
AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A prot...    21   9.5  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    21   9.5  

>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 10/34 (29%), Positives = 18/34 (52%)
 Frame = +3

Query: 309 ITVEHVVRCFVNNAALKHQLYLNSELRKRLEYVM 410
           IT+  ++ CF  N + K     N+ +   +EYV+
Sbjct: 4   ITLFMIIICFERNLSYKVMYNGNNNVTDLVEYVL 37


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -1

Query: 539 AVPQQFYHQEGAFVV 495
           AV  QFYHQ  + VV
Sbjct: 96  AVAAQFYHQAASAVV 110


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -1

Query: 539 AVPQQFYHQEGAFVV 495
           AV  QFYHQ  + VV
Sbjct: 155 AVAAQFYHQAASAVV 169


>AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A
           protein.
          Length = 150

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -1

Query: 539 AVPQQFYHQEGAFVV 495
           AV  QFYHQ  + VV
Sbjct: 96  AVAAQFYHQAASAVV 110


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -1

Query: 539 AVPQQFYHQEGAFVV 495
           AV  QFYHQ  + VV
Sbjct: 155 AVAAQFYHQAASAVV 169


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,572
Number of Sequences: 336
Number of extensions: 2186
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23866870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)