Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP08_F_F02
(860 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_1457| Best HMM Match : VHS (HMM E-Value=2e-31) 154 1e-37
SB_27781| Best HMM Match : Ank (HMM E-Value=0) 81 9e-16
SB_17106| Best HMM Match : FYVE (HMM E-Value=5e-17) 69 4e-12
SB_6595| Best HMM Match : No HMM Matches (HMM E-Value=.) 68 1e-11
SB_4021| Best HMM Match : FYVE (HMM E-Value=2.3e-32) 68 1e-11
SB_18590| Best HMM Match : FYVE (HMM E-Value=8.8e-29) 67 1e-11
SB_18255| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 7e-09
SB_33079| Best HMM Match : FYVE (HMM E-Value=1.1e-29) 56 3e-08
SB_26086| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 1e-07
SB_37504| Best HMM Match : PIP5K (HMM E-Value=0) 49 4e-06
SB_30518| Best HMM Match : FYVE (HMM E-Value=1.2e-18) 49 6e-06
SB_22337| Best HMM Match : FYVE (HMM E-Value=1.3e-05) 49 6e-06
SB_37872| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 7e-06
SB_24791| Best HMM Match : FYVE (HMM E-Value=7.2e-14) 47 2e-05
SB_9385| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_20102| Best HMM Match : FYVE (HMM E-Value=3.8e-08) 42 5e-04
SB_32577| Best HMM Match : PH (HMM E-Value=7e-17) 38 0.008
SB_11996| Best HMM Match : FYVE (HMM E-Value=0.004) 36 0.056
SB_19405| Best HMM Match : DMP1 (HMM E-Value=3.8) 31 0.91
SB_7586| Best HMM Match : 7tm_1 (HMM E-Value=0.2) 29 3.7
SB_8254| Best HMM Match : zf-C2H2 (HMM E-Value=0) 29 3.7
SB_38826| Best HMM Match : zf-C2H2 (HMM E-Value=0) 29 4.9
SB_18954| Best HMM Match : DNA_pol_B_2 (HMM E-Value=0.0015) 29 6.4
SB_45205| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
SB_44270| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
SB_50077| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
SB_45201| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
>SB_1457| Best HMM Match : VHS (HMM E-Value=2e-31)
Length = 892
Score = 154 bits (373), Expect = 1e-37
Identities = 79/175 (45%), Positives = 108/175 (61%), Gaps = 13/175 (7%)
Frame = +2
Query: 173 LKAEGYKFPALKESDAMFSADTAPEWADGEVCHRCRIAFSLMVRRHHCRACGQVFCQQCS 352
+K EG KFPA ESDAMFSAD+AP WA+G+VCH CR+ F +R+HHCR CGQVFC++CS
Sbjct: 202 MKMEGCKFPAFNESDAMFSADSAPAWAEGDVCHMCRVKFGTFIRQHHCRNCGQVFCKKCS 261
Query: 353 SKTSTLPKFGIEKEVRVCDACFDKV--------SRPPTSTAKLEITDTSNDY--GPTQPQ 502
SK S +P+FGIEKEVRVCD C+ K+ ++P ST+ + +Y P +
Sbjct: 262 SKESIIPQFGIEKEVRVCDPCYLKINPNSKTAQTKPEPSTSGGAENELPPEYLNSPLFKE 321
Query: 503 KRPPGGKTAEEL--QXEXXLQLAIALXXSEXEHKXKXRXS-RPHIAPDPTPHRPN 658
+ P K +L Q E LQLA+AL S+ E + + R S + + P + P+
Sbjct: 322 SQEPPKKNERDLQEQEEEELQLAMALSLSQDEAQKEVRPSPKSSLYGSPDSYSPS 376
>SB_27781| Best HMM Match : Ank (HMM E-Value=0)
Length = 485
Score = 81.4 bits (192), Expect = 9e-16
Identities = 29/63 (46%), Positives = 43/63 (68%)
Frame = +2
Query: 242 PEWADGEVCHRCRIAFSLMVRRHHCRACGQVFCQQCSSKTSTLPKFGIEKEVRVCDACFD 421
P W+DG+ CH C + FS+ R+HHCR CG++ C +CS K + K+ + K VRVCD CF+
Sbjct: 421 PPWSDGDSCHECGMKFSIKNRKHHCRHCGRLLCAKCSCKQIPIIKYELAKPVRVCDVCFE 480
Query: 422 KVS 430
++
Sbjct: 481 MLT 483
>SB_17106| Best HMM Match : FYVE (HMM E-Value=5e-17)
Length = 289
Score = 69.3 bits (162), Expect = 4e-12
Identities = 30/83 (36%), Positives = 43/83 (51%), Gaps = 11/83 (13%)
Frame = +2
Query: 215 DAMFSADTAPEWADGEVCHRCRIAF-----------SLMVRRHHCRACGQVFCQQCSSKT 361
D PEW+ ++C RC F ++ VR+HHCR CG+ CQ CS K
Sbjct: 158 DMRIKRKETPEWSQCDICERCGGPFFWNFKDMWSKKTVGVRQHHCRKCGRAVCQSCSEKQ 217
Query: 362 STLPKFGIEKEVRVCDACFDKVS 430
STLP G E +R+C+ C+ ++
Sbjct: 218 STLPIMGFEYSIRICNECYGTIT 240
>SB_6595| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 693
Score = 67.7 bits (158), Expect = 1e-11
Identities = 26/53 (49%), Positives = 33/53 (62%)
Frame = +2
Query: 266 CHRCRIAFSLMVRRHHCRACGQVFCQQCSSKTSTLPKFGIEKEVRVCDACFDK 424
CH C+ F R+HHCR+CGQ FC +CS + T+P G + VRVCD C K
Sbjct: 637 CHHCKQEFKGSDRKHHCRSCGQGFCDECSKQRRTVPSRGWDHPVRVCDKCVTK 689
Score = 62.9 bits (146), Expect = 3e-10
Identities = 32/84 (38%), Positives = 42/84 (50%), Gaps = 5/84 (5%)
Frame = +2
Query: 188 YKFPALKESDAMFSADTAPE-WADGE---VCHRCRIAFSLMVRRHHCRACGQVFCQQCSS 355
Y P+ + A + AP+ W C C FS ++HHCRACG FC CS+
Sbjct: 467 YSTPSSRAMTAWIADRVAPDYWVPNAQILACQSCDHVFSADEKKHHCRACGGGFCDNCSA 526
Query: 356 KTSTLPKFGIEKE-VRVCDACFDK 424
+P+ G E VRVCD+CF K
Sbjct: 527 NKKPVPERGWGMEPVRVCDSCFSK 550
>SB_4021| Best HMM Match : FYVE (HMM E-Value=2.3e-32)
Length = 255
Score = 67.7 bits (158), Expect = 1e-11
Identities = 26/53 (49%), Positives = 33/53 (62%)
Frame = +2
Query: 266 CHRCRIAFSLMVRRHHCRACGQVFCQQCSSKTSTLPKFGIEKEVRVCDACFDK 424
CH C+ F R+HHCR+CGQ FC +CS + T+P G + VRVCD C K
Sbjct: 199 CHHCKQEFKGSDRKHHCRSCGQGFCDECSKQRRTVPSRGWDHPVRVCDKCVTK 251
Score = 62.9 bits (146), Expect = 3e-10
Identities = 32/84 (38%), Positives = 42/84 (50%), Gaps = 5/84 (5%)
Frame = +2
Query: 188 YKFPALKESDAMFSADTAPE-WADGE---VCHRCRIAFSLMVRRHHCRACGQVFCQQCSS 355
Y P+ + A + AP+ W C C FS ++HHCRACG FC CS+
Sbjct: 29 YSTPSSRAMTAWIADRVAPDYWVPNAQILACQSCDHVFSADEKKHHCRACGGGFCDNCSA 88
Query: 356 KTSTLPKFGIEKE-VRVCDACFDK 424
+P+ G E VRVCD+CF K
Sbjct: 89 NKKPVPERGWGMEPVRVCDSCFSK 112
>SB_18590| Best HMM Match : FYVE (HMM E-Value=8.8e-29)
Length = 551
Score = 67.3 bits (157), Expect = 1e-11
Identities = 34/88 (38%), Positives = 52/88 (59%), Gaps = 1/88 (1%)
Frame = +2
Query: 245 EWADGEVCHRCRIAFSLMVRRHHCRACGQVFCQQCSSKTSTLPKFGIEKEVRVCDACFDK 424
E +D C+ C FS+ +R+HHCR CG +FC C+SKT+TL +K RVC+ C+ +
Sbjct: 354 EDSDVTNCNSCDKVFSITLRKHHCRNCGLIFCSDCTSKTATLA--ASKKPARVCETCYHE 411
Query: 425 VSRPPTSTAKLEITDTSND-YGPTQPQK 505
V+ T + K EI S + + P + +K
Sbjct: 412 VT---TGSIKDEIEQQSTELFLPAKKRK 436
>SB_18255| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1457
Score = 58.4 bits (135), Expect = 7e-09
Identities = 33/88 (37%), Positives = 44/88 (50%), Gaps = 7/88 (7%)
Frame = +2
Query: 239 APEW-ADGEV--CHRCRIAFSLMVRRHHCRACGQVFCQQCSSKTSTLPKFGIEKEVRVCD 409
A W +D EV C C+ FS ++R+HHCR CG++FC CS+ P K RVC
Sbjct: 935 ADRWISDDEVNKCTSCKAEFSFLLRKHHCRMCGRIFCHSCSNNWVRTPH--SRKMKRVCQ 992
Query: 410 ACF--DKVSRPP--TSTAKLEITDTSND 481
C DK +P T + E D +D
Sbjct: 993 CCLENDKQIKPQHVTHVGEAEEDDCMSD 1020
>SB_33079| Best HMM Match : FYVE (HMM E-Value=1.1e-29)
Length = 212
Score = 56.4 bits (130), Expect = 3e-08
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Frame = +2
Query: 206 KESDAMFSADTAPEWADGEVCHRC-RIAFSLMVRRHHCRACGQVFCQQCSSKTSTLPKFG 382
K++ + +A P+ ++ C C + F+ + RRHHCR CG V C CS+K LP
Sbjct: 71 KKAGGVHAAVWVPD-SEASTCMSCMKTKFTAINRRHHCRKCGAVVCGACSTKKFLLPAQS 129
Query: 383 IEKEVRVCDACFDKVS 430
K +RVC++C++ +S
Sbjct: 130 -SKPLRVCNSCYNTLS 144
>SB_26086| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1511
Score = 54.0 bits (124), Expect = 1e-07
Identities = 26/62 (41%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Frame = +2
Query: 239 APEWADGE---VCHRCRIAFSLMVRRHHCRACGQVFCQQCSSKTSTLPKFGIEKEVRVCD 409
AP W E +C C F+L RRHHCRACG ++C CS + L ++ K RVC
Sbjct: 1291 APAWIRDESVTMCMLCDALFTLTRRRHHCRACGGIYCNACSHNKAPL-EYRDGKLCRVCR 1349
Query: 410 AC 415
+C
Sbjct: 1350 SC 1351
>SB_37504| Best HMM Match : PIP5K (HMM E-Value=0)
Length = 2119
Score = 49.2 bits (112), Expect = 4e-06
Identities = 25/56 (44%), Positives = 30/56 (53%)
Frame = +2
Query: 182 EGYKFPALKESDAMFSADTAPEWADGEVCHRCRIAFSLMVRRHHCRACGQVFCQQC 349
EG A KESD F P+ E C+ C F+ RRHHCR CGQ+FC +C
Sbjct: 111 EGQLSQAYKESD--FKQYWMPDETCKE-CYECGEKFNTFRRRHHCRLCGQIFCYRC 163
>SB_30518| Best HMM Match : FYVE (HMM E-Value=1.2e-18)
Length = 447
Score = 48.8 bits (111), Expect = 6e-06
Identities = 19/41 (46%), Positives = 24/41 (58%)
Frame = +2
Query: 260 EVCHRCRIAFSLMVRRHHCRACGQVFCQQCSSKTSTLPKFG 382
+ C C+ F+ + RRHHCR CG VFC CSSK + G
Sbjct: 385 KTCMACKTRFTTVRRRHHCRKCGGVFCGACSSKRVPILSLG 425
>SB_22337| Best HMM Match : FYVE (HMM E-Value=1.3e-05)
Length = 47
Score = 48.8 bits (111), Expect = 6e-06
Identities = 19/45 (42%), Positives = 28/45 (62%)
Frame = +2
Query: 302 RRHHCRACGQVFCQQCSSKTSTLPKFGIEKEVRVCDACFDKVSRP 436
RRHHCR CG+V C CS + + +G + VRVC C++++ P
Sbjct: 3 RRHHCRRCGRVVCSVCSPHSCVVHGYG-KALVRVCSTCYERIYVP 46
>SB_37872| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 357
Score = 48.4 bits (110), Expect = 7e-06
Identities = 19/62 (30%), Positives = 31/62 (50%)
Frame = +2
Query: 254 DGEVCHRCRIAFSLMVRRHHCRACGQVFCQQCSSKTSTLPKFGIEKEVRVCDACFDKVSR 433
D C C+ + ++HC CG++FC+ C SK T + +VCDAC+ ++
Sbjct: 283 DARECRNCQKPLNTNKDKYHCHHCGKIFCEGCRSK--TFSNSSTRRPHQVCDACYATLTN 340
Query: 434 PP 439
P
Sbjct: 341 DP 342
>SB_24791| Best HMM Match : FYVE (HMM E-Value=7.2e-14)
Length = 64
Score = 47.2 bits (107), Expect = 2e-05
Identities = 23/50 (46%), Positives = 28/50 (56%)
Frame = +2
Query: 200 ALKESDAMFSADTAPEWADGEVCHRCRIAFSLMVRRHHCRACGQVFCQQC 349
A KESD F P+ E C+ C F+ RRHHCR CGQ+FC +C
Sbjct: 4 AYKESD--FKQYWMPDETCKE-CYECGEKFNTFRRRHHCRLCGQIFCYRC 50
>SB_9385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 608
Score = 46.4 bits (105), Expect = 3e-05
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 8/65 (12%)
Frame = +2
Query: 194 FPALKESDA-MFSAD----TAPEW-ADGE--VCHRCRIAFSLMVRRHHCRACGQVFCQQC 349
FPA E A +FS+ P W +D E VC C F+ + R+HHCR CG+V C +C
Sbjct: 16 FPATTEGPANVFSSTPFLLVKPRWMSDDEAHVCPLCSQKFTQIRRKHHCRQCGRVLCNKC 75
Query: 350 SSKTS 364
++ S
Sbjct: 76 CNEKS 80
>SB_20102| Best HMM Match : FYVE (HMM E-Value=3.8e-08)
Length = 910
Score = 42.3 bits (95), Expect = 5e-04
Identities = 18/34 (52%), Positives = 22/34 (64%), Gaps = 3/34 (8%)
Frame = +2
Query: 242 PEWADGEV---CHRCRIAFSLMVRRHHCRACGQV 334
P W EV C C + FSL+ R+HHCRACG+V
Sbjct: 524 PIWVPDEVALFCMNCGLKFSLIRRKHHCRACGKV 557
>SB_32577| Best HMM Match : PH (HMM E-Value=7e-17)
Length = 1248
Score = 38.3 bits (85), Expect = 0.008
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Frame = +2
Query: 206 KESDAMFSADTAPEWA-DGEV--CHRCRIAFSLMVRRHHCRACGQVFCQQCSSKTS 364
++S+ + AP W D V C C F++ RRHHCR CG+V + S+ S
Sbjct: 1121 QDSEDTKLGEKAPVWIPDARVTMCMLCTDDFTVTNRRHHCRGCGKVVGNESGSQVS 1176
>SB_11996| Best HMM Match : FYVE (HMM E-Value=0.004)
Length = 610
Score = 35.5 bits (78), Expect = 0.056
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +2
Query: 227 SADTAPEWADGEVCHRCRIAFSLMVRRHHCRACGQVFCQQC 349
+ + PE+ + VC+ C + F+L R+ CR C + C C
Sbjct: 54 TTNPTPEFTE-MVCYLCSVNFTLFKRKSTCRGCKKTLCSNC 93
>SB_19405| Best HMM Match : DMP1 (HMM E-Value=3.8)
Length = 551
Score = 31.5 bits (68), Expect = 0.91
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +2
Query: 617 RPHIAPDPTPHRPNISTXP 673
RPH+A DP HRPN++ P
Sbjct: 113 RPHLARDPYEHRPNLARAP 131
>SB_7586| Best HMM Match : 7tm_1 (HMM E-Value=0.2)
Length = 362
Score = 29.5 bits (63), Expect = 3.7
Identities = 35/121 (28%), Positives = 51/121 (42%), Gaps = 10/121 (8%)
Frame = +2
Query: 176 KAEGYKFPALKESDAM----FSADTAPEWADGEVCHRCRIAFSLMVRRHHC-RACGQVFC 340
+ EG K P+ S A F A+ AP+ A G + S++ RR+ C V
Sbjct: 211 RGEGQKSPSSSPSTAARQRNFVAEKAPKNAHGSSSTAFVVYSSVVGRRNPVPEDCPTVLS 270
Query: 341 QQ-----CSSKTSTLPKFGIEKEVRVCDACFDKVSRPPTSTAKLEITDTSNDYGPTQPQK 505
++ C KTS LP IEK + + D ST + DT N P +P++
Sbjct: 271 RRNALYRCEGKTSQLPSSKIEKHRPI--SINDDEDPTLLSTHGYSL-DTDNVVSPFKPEQ 327
Query: 506 R 508
R
Sbjct: 328 R 328
>SB_8254| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 684
Score = 29.5 bits (63), Expect = 3.7
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +2
Query: 299 VRRHHCRACGQVFCQQCSSKTSTLPKFGIEKEVRVCDACFDKVSRP 436
V++H C CG+ F C+ K EK + CD C + ++P
Sbjct: 34 VKQHECPVCGKSFLYPCALKRHAASHL-TEKPYK-CDLCEKRFTQP 77
>SB_38826| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 505
Score = 29.1 bits (62), Expect = 4.9
Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Frame = +2
Query: 308 HHCRACGQVFCQQCSSKTSTLPKFGIE-KEVRVCDACF 418
H C CG+ F Q S KT L G + ++ C CF
Sbjct: 243 HQCPQCGKFFAQASSLKTHALTHTGEKPQQCPQCGKCF 280
>SB_18954| Best HMM Match : DNA_pol_B_2 (HMM E-Value=0.0015)
Length = 921
Score = 28.7 bits (61), Expect = 6.4
Identities = 14/56 (25%), Positives = 25/56 (44%), Gaps = 3/56 (5%)
Frame = +2
Query: 266 CHRCRIAFSLMVRRHHCR-ACGQVFCQQCSSKTSTLP--KFGIEKEVRVCDACFDK 424
C C+I ++ HHC C F +C+ K + P + G + D C+++
Sbjct: 211 CFECKIGYN-SADAHHCEGTCKCCFSTECNGKVNNAPWRECGSCNRIFAGDECYER 265
>SB_45205| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 329
Score = 28.3 bits (60), Expect = 8.5
Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = +2
Query: 284 AFSLMVRRHHCRACGQVFCQQCSSKTSTLPKFGIEK-EVRVCDACFDK 424
A +L + H C CG+ F Q + KT ++ E VC CF +
Sbjct: 42 ALNLSDKPHKCDECGKCFTQSGTLKTHLRIHTKVKPYECEVCGKCFTR 89
>SB_44270| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1172
Score = 28.3 bits (60), Expect = 8.5
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 7/52 (13%)
Frame = +2
Query: 233 DTAPEWADGEVCHRC-----RIAFSLMVRRHHCRACGQV--FCQQCSSKTST 367
D+A DG CHRC + A + HHC CG++ F C SK ++
Sbjct: 1013 DSAGPKFDGR-CHRCNKQGHKAADCRCSQNHHCEKCGKIGHFKVCCKSKQTS 1063
>SB_50077| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 907
Score = 28.3 bits (60), Expect = 8.5
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -3
Query: 288 KAIRHL*QTSPSAHSGAVSAENIASDSFNAGNL 190
+A R + SP HSGA +A I DSF N+
Sbjct: 859 EAKRRFVRPSPGGHSGAPAAPAIGPDSFYGDNM 891
>SB_45201| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 522
Score = 28.3 bits (60), Expect = 8.5
Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = +2
Query: 284 AFSLMVRRHHCRACGQVFCQQCSSKTSTLPKFGIEK-EVRVCDACFDK 424
A +L + H C CG+ F Q + KT ++ E VC CF +
Sbjct: 42 ALNLSDKPHKCDECGKCFTQSGTLKTHLRIHTKVKPYECEVCGKCFTR 89
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,374,436
Number of Sequences: 59808
Number of extensions: 294410
Number of successful extensions: 1095
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 947
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1085
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2455286845
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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