Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP08_F_F02
(860 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58751-7|AAB00658.2| 729|Caenorhabditis elegans Hepatocyte grow... 140 1e-33
Z92831-2|CAB07368.2| 861|Caenorhabditis elegans Hypothetical pr... 78 9e-15
AF099001-6|AAC68738.2| 661|Caenorhabditis elegans Lateral signa... 71 8e-13
Z67879-6|CAA91791.2| 1482|Caenorhabditis elegans Hypothetical pr... 71 1e-12
AL023817-1|CAA19436.2| 1482|Caenorhabditis elegans Hypothetical ... 71 1e-12
Z93390-7|CAB07677.1| 931|Caenorhabditis elegans Hypothetical pr... 63 3e-10
AL032675-2|CAA21780.1| 931|Caenorhabditis elegans Hypothetical ... 63 3e-10
Z22181-10|CAA80187.1| 266|Caenorhabditis elegans Hypothetical p... 62 4e-10
Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical pr... 59 5e-09
Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical pr... 59 5e-09
AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein. 59 5e-09
U23517-6|AAB93340.1| 1280|Caenorhabditis elegans A kinase anchor... 56 3e-08
AF045926-1|AAC24507.1| 1280|Caenorhabditis elegans A kinase anch... 56 3e-08
U23517-7|AAM98040.1| 1284|Caenorhabditis elegans A kinase anchor... 54 1e-07
Z47808-2|CAA87770.1| 415|Caenorhabditis elegans Hypothetical pr... 54 2e-07
Z49072-2|CAB61017.2| 1006|Caenorhabditis elegans Hypothetical pr... 53 3e-07
Z49072-1|CAA88884.1| 938|Caenorhabditis elegans Hypothetical pr... 53 3e-07
AF031519-1|AAC78763.1| 930|Caenorhabditis elegans myotubularin ... 53 3e-07
U23517-8|AAM98041.1| 605|Caenorhabditis elegans A kinase anchor... 50 3e-06
U40797-15|AAB37553.2| 1004|Caenorhabditis elegans Temporarily as... 49 5e-06
AC024777-3|AAF60562.3| 563|Caenorhabditis elegans Hypothetical ... 45 6e-05
Z75547-11|CAA99905.4| 394|Caenorhabditis elegans Hypothetical p... 41 0.001
U13070-7|AAC46638.1| 414|Caenorhabditis elegans Rabaptin (rab e... 41 0.001
Z81546-10|CAH10812.1| 674|Caenorhabditis elegans Hypothetical p... 39 0.005
Z81546-9|CAD45596.2| 782|Caenorhabditis elegans Hypothetical pr... 39 0.005
Z81546-8|CAB04456.1| 676|Caenorhabditis elegans Hypothetical pr... 39 0.005
AY313179-1|AAP79304.1| 782|Caenorhabditis elegans myotubularin-... 39 0.005
AY313177-1|AAP79302.1| 676|Caenorhabditis elegans myotubularin-... 39 0.005
Z30215-6|CAF31477.2| 1144|Caenorhabditis elegans Hypothetical pr... 32 0.60
U00051-15|AAZ91344.1| 270|Caenorhabditis elegans Synaptotagmin ... 30 1.8
U80442-6|AAB37669.1| 294|Caenorhabditis elegans Hypothetical pr... 28 7.4
>U58751-7|AAB00658.2| 729|Caenorhabditis elegans Hepatocyte growth
factor-regulatedtk substrate (hrs) family protein 1
protein.
Length = 729
Score = 140 bits (339), Expect = 1e-33
Identities = 68/149 (45%), Positives = 90/149 (60%), Gaps = 3/149 (2%)
Frame = +2
Query: 173 LKAEGYKFPALKESDAMFSADTAPEWADGEVCHRCRIAFSLMVRRHHCRACGQVFCQQCS 352
+K G+ FP+LKE+DAMF A APEWADG C+RCR FS+ R+HHCRACGQ+FC +CS
Sbjct: 132 MKLAGFDFPSLKEADAMFMAQVAPEWADGPECYRCRSVFSVFTRKHHCRACGQIFCDKCS 191
Query: 353 SKTSTLPKFGIEKEVRVCDACFDK---VSRPPTSTAKLEITDTSNDYGPTQPQKRPPGGK 523
S+ LP+FGIEKEVRVC+ C++K + K ++ G ++ K
Sbjct: 192 SRELALPQFGIEKEVRVCETCYEKKVAEVKERYPAVKKQLDAAHGRKGDSEADKAAKEKL 251
Query: 524 TAEELQXEXXLQLAIALXXSEXEHKXKXR 610
E + E L LAIA+ SE E K K +
Sbjct: 252 LRE--KEEEDLALAIAISQSEAEAKEKEK 278
>Z92831-2|CAB07368.2| 861|Caenorhabditis elegans Hypothetical
protein F22G12.4 protein.
Length = 861
Score = 77.8 bits (183), Expect = 9e-15
Identities = 32/68 (47%), Positives = 41/68 (60%)
Frame = +2
Query: 227 SADTAPEWADGEVCHRCRIAFSLMVRRHHCRACGQVFCQQCSSKTSTLPKFGIEKEVRVC 406
S + P W+DG+ C C FSL R+HHCR CG+ C +CS T + K+G EK VRVC
Sbjct: 788 SLEAEPRWSDGDTCD-CGARFSLTSRKHHCRHCGRHVCSKCSETTMPIAKYGEEKRVRVC 846
Query: 407 DACFDKVS 430
D C +S
Sbjct: 847 DVCAHVIS 854
>AF099001-6|AAC68738.2| 661|Caenorhabditis elegans Lateral
signaling target protein 2 protein.
Length = 661
Score = 71.3 bits (167), Expect = 8e-13
Identities = 25/55 (45%), Positives = 39/55 (70%)
Frame = +2
Query: 254 DGEVCHRCRIAFSLMVRRHHCRACGQVFCQQCSSKTSTLPKFGIEKEVRVCDACF 418
D E C C + F+ + RRHHCR CG++FC +CS T ++P+ G +++VRVC+ C+
Sbjct: 568 DCEQCTACSMPFNFVRRRHHCRNCGRIFCHKCSCNTISIPEHGYDRKVRVCNLCY 622
>Z67879-6|CAA91791.2| 1482|Caenorhabditis elegans Hypothetical
protein VF11C1L.1 protein.
Length = 1482
Score = 70.9 bits (166), Expect = 1e-12
Identities = 36/104 (34%), Positives = 51/104 (49%), Gaps = 1/104 (0%)
Frame = +2
Query: 197 PALKE-SDAMFSADTAPEWADGEVCHRCRIAFSLMVRRHHCRACGQVFCQQCSSKTSTLP 373
P LK+ +D+ F P+ + G C++C F+ RRHHCR CGQ+FC +C S
Sbjct: 93 PQLKDYNDSNFKQYWMPD-STGRECYQCEERFTTFRRRHHCRLCGQIFCAKCCSSHIDGA 151
Query: 374 KFGIEKEVRVCDACFDKVSRPPTSTAKLEITDTSNDYGPTQPQK 505
G E+R+CD C KV R + T T+ P +K
Sbjct: 152 ALGYMGELRLCDYCARKVQRLAEEGKQTPTTSTTRSQTPVNSRK 195
>AL023817-1|CAA19436.2| 1482|Caenorhabditis elegans Hypothetical
protein VF11C1L.1 protein.
Length = 1482
Score = 70.9 bits (166), Expect = 1e-12
Identities = 36/104 (34%), Positives = 51/104 (49%), Gaps = 1/104 (0%)
Frame = +2
Query: 197 PALKE-SDAMFSADTAPEWADGEVCHRCRIAFSLMVRRHHCRACGQVFCQQCSSKTSTLP 373
P LK+ +D+ F P+ + G C++C F+ RRHHCR CGQ+FC +C S
Sbjct: 93 PQLKDYNDSNFKQYWMPD-STGRECYQCEERFTTFRRRHHCRLCGQIFCAKCCSSHIDGA 151
Query: 374 KFGIEKEVRVCDACFDKVSRPPTSTAKLEITDTSNDYGPTQPQK 505
G E+R+CD C KV R + T T+ P +K
Sbjct: 152 ALGYMGELRLCDYCARKVQRLAEEGKQTPTTSTTRSQTPVNSRK 195
>Z93390-7|CAB07677.1| 931|Caenorhabditis elegans Hypothetical protein
VT23B5.2 protein.
Length = 931
Score = 62.9 bits (146), Expect = 3e-10
Identities = 24/56 (42%), Positives = 33/56 (58%)
Frame = +2
Query: 266 CHRCRIAFSLMVRRHHCRACGQVFCQQCSSKTSTLPKFGIEKEVRVCDACFDKVSR 433
C C F+L R+HHCR CGQ+FC CS S + + I + VRVC CF ++ +
Sbjct: 869 CDDCEHKFTLADRKHHCRNCGQIFCSTCSRFESHITRMNISRPVRVCRKCFQRLQQ 924
>AL032675-2|CAA21780.1| 931|Caenorhabditis elegans Hypothetical
protein VT23B5.2 protein.
Length = 931
Score = 62.9 bits (146), Expect = 3e-10
Identities = 24/56 (42%), Positives = 33/56 (58%)
Frame = +2
Query: 266 CHRCRIAFSLMVRRHHCRACGQVFCQQCSSKTSTLPKFGIEKEVRVCDACFDKVSR 433
C C F+L R+HHCR CGQ+FC CS S + + I + VRVC CF ++ +
Sbjct: 869 CDDCEHKFTLADRKHHCRNCGQIFCSTCSRFESHITRMNISRPVRVCRKCFQRLQQ 924
>Z22181-10|CAA80187.1| 266|Caenorhabditis elegans Hypothetical
protein ZK632.12 protein.
Length = 266
Score = 62.5 bits (145), Expect = 4e-10
Identities = 33/68 (48%), Positives = 41/68 (60%), Gaps = 4/68 (5%)
Frame = +2
Query: 239 APEWA-DGEV--CHRC-RIAFSLMVRRHHCRACGQVFCQQCSSKTSTLPKFGIEKEVRVC 406
A W DGE C C + F+L+ RRHHCR CG+V C CSS+T + +K VRVC
Sbjct: 146 AAVWVPDGEAVKCMVCGKTQFNLVQRRHHCRNCGRVVCGACSSRTFRIDNVH-KKPVRVC 204
Query: 407 DACFDKVS 430
D CFD +S
Sbjct: 205 DHCFDSLS 212
>Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical protein
T10G3.5b protein.
Length = 1203
Score = 58.8 bits (136), Expect = 5e-09
Identities = 23/51 (45%), Positives = 31/51 (60%)
Frame = +2
Query: 266 CHRCRIAFSLMVRRHHCRACGQVFCQQCSSKTSTLPKFGIEKEVRVCDACF 418
C C FSL VR+HHCR CG+++C CSSK+ + + VR C+ CF
Sbjct: 1150 CTECGKVFSLTVRKHHCRVCGKIYCNPCSSKSVRIA--SAKNPVRACNTCF 1198
>Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical protein
T10G3.5a protein.
Length = 1205
Score = 58.8 bits (136), Expect = 5e-09
Identities = 23/51 (45%), Positives = 31/51 (60%)
Frame = +2
Query: 266 CHRCRIAFSLMVRRHHCRACGQVFCQQCSSKTSTLPKFGIEKEVRVCDACF 418
C C FSL VR+HHCR CG+++C CSSK+ + + VR C+ CF
Sbjct: 1152 CTECGKVFSLTVRKHHCRVCGKIYCNPCSSKSVRIA--SAKNPVRACNTCF 1200
>AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein.
Length = 1205
Score = 58.8 bits (136), Expect = 5e-09
Identities = 23/51 (45%), Positives = 31/51 (60%)
Frame = +2
Query: 266 CHRCRIAFSLMVRRHHCRACGQVFCQQCSSKTSTLPKFGIEKEVRVCDACF 418
C C FSL VR+HHCR CG+++C CSSK+ + + VR C+ CF
Sbjct: 1152 CTECGKVFSLTVRKHHCRVCGKIYCNPCSSKSVRIA--SAKNPVRACNTCF 1200
>U23517-6|AAB93340.1| 1280|Caenorhabditis elegans A kinase anchor
protein protein1, isoform a protein.
Length = 1280
Score = 56.0 bits (129), Expect = 3e-08
Identities = 30/84 (35%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Frame = +2
Query: 203 LKESDAMFSADTAPEWADGEVCHRCRIAFSLMVRRHHCRACGQVFCQQCSSKTSTLPKFG 382
L ES+ T+P W C C + F+++ RRHHCRACG+V C C ++ + L
Sbjct: 524 LTESELQLGK-TSPYWIPDSECPNCML-FTIITRRHHCRACGRVLCGSCCNEKAFLEYLQ 581
Query: 383 IE----KEVRVCDACFDKVSRPPT 442
E + VRVC C ++R T
Sbjct: 582 EEGKKLQAVRVCKPCSAMLARIET 605
>AF045926-1|AAC24507.1| 1280|Caenorhabditis elegans A kinase anchor
protein protein.
Length = 1280
Score = 56.0 bits (129), Expect = 3e-08
Identities = 30/84 (35%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Frame = +2
Query: 203 LKESDAMFSADTAPEWADGEVCHRCRIAFSLMVRRHHCRACGQVFCQQCSSKTSTLPKFG 382
L ES+ T+P W C C + F+++ RRHHCRACG+V C C ++ + L
Sbjct: 524 LTESELQLGK-TSPYWIPDSECPNCML-FTIITRRHHCRACGRVLCGSCCNEKAFLEYLQ 581
Query: 383 IE----KEVRVCDACFDKVSRPPT 442
E + VRVC C ++R T
Sbjct: 582 EEGKKLQAVRVCKPCSAMLARIET 605
>U23517-7|AAM98040.1| 1284|Caenorhabditis elegans A kinase anchor
protein protein1, isoform b protein.
Length = 1284
Score = 54.4 bits (125), Expect = 1e-07
Identities = 30/87 (34%), Positives = 43/87 (49%), Gaps = 7/87 (8%)
Frame = +2
Query: 203 LKESDAMFSADTAPEWADGEVCHRCRIA---FSLMVRRHHCRACGQVFCQQCSSKTSTLP 373
L ES+ T+P W C C + F+++ RRHHCRACG+V C C ++ + L
Sbjct: 524 LTESELQLGK-TSPYWIPDSECPNCMLCNTRFTIITRRHHCRACGRVLCGSCCNEKAFLE 582
Query: 374 KFGIE----KEVRVCDACFDKVSRPPT 442
E + VRVC C ++R T
Sbjct: 583 YLQEEGKKLQAVRVCKPCSAMLARIET 609
>Z47808-2|CAA87770.1| 415|Caenorhabditis elegans Hypothetical
protein D2013.2 protein.
Length = 415
Score = 53.6 bits (123), Expect = 2e-07
Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 11/77 (14%)
Frame = +2
Query: 242 PEWADGEVCHRCRIAFS-----------LMVRRHHCRACGQVFCQQCSSKTSTLPKFGIE 388
PEW + C +C F + +R+HHCR CG C C +T P G E
Sbjct: 284 PEWKTSDCCQKCNQPFFWNLQAMWQRKVVGLRQHHCRTCGSAVCGSCCDNWTTYPPMGYE 343
Query: 389 KEVRVCDACFDKVSRPP 439
++R+C+ C ++ P
Sbjct: 344 TKIRICNDCNARMKDNP 360
>Z49072-2|CAB61017.2| 1006|Caenorhabditis elegans Hypothetical protein
T24A11.1b protein.
Length = 1006
Score = 52.8 bits (121), Expect = 3e-07
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 5/90 (5%)
Frame = +2
Query: 224 FSADTAPEWADGEVCHRCRIAFSLMV-----RRHHCRACGQVFCQQCSSKTSTLPKFGIE 388
F +T E G C C+ F+ + R+HHCR CG+V C+ CS ++ + G
Sbjct: 811 FKPNTTWEGESGH-CAYCKKEFNKLSVYVEDRQHHCRNCGRVVCEDCSKNRFSVIEEGKS 869
Query: 389 KEVRVCDACFDKVSRPPTSTAKLEITDTSN 478
+ R CD+C+D + + T TS+
Sbjct: 870 VQKRACDSCYDSMHETDLKLSSSSTTTTSS 899
>Z49072-1|CAA88884.1| 938|Caenorhabditis elegans Hypothetical protein
T24A11.1a protein.
Length = 938
Score = 52.8 bits (121), Expect = 3e-07
Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Frame = +2
Query: 224 FSADTAPEWADGEVCHRCRIAFSLMV-----RRHHCRACGQVFCQQCSSKTSTLPKFGIE 388
F +T E G C C+ F+ + R+HHCR CG+V C+ CS ++ + G
Sbjct: 784 FKPNTTWEGESGH-CAYCKKEFNKLSVYVEDRQHHCRNCGRVVCEDCSKNRFSVIEEGKS 842
Query: 389 KEVRVCDACFDKVSRPPTSTAK---LEITDTSNDYGPTQP 499
+ R CD+C+D + ++ L + + +GP+ P
Sbjct: 843 VQKRACDSCYDSMHETDLKLSRATSLSEMSSFDSFGPSSP 882
>AF031519-1|AAC78763.1| 930|Caenorhabditis elegans myotubularin
homologous protein 1 protein.
Length = 930
Score = 52.8 bits (121), Expect = 3e-07
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 5/90 (5%)
Frame = +2
Query: 224 FSADTAPEWADGEVCHRCRIAFSLMV-----RRHHCRACGQVFCQQCSSKTSTLPKFGIE 388
F +T E G C C+ F+ + R+HHCR CG+V C+ CS ++ + G
Sbjct: 811 FKPNTTWEGESGH-CAYCKKEFNKLSVYVEDRQHHCRNCGRVVCEDCSKNRFSVIEEGKS 869
Query: 389 KEVRVCDACFDKVSRPPTSTAKLEITDTSN 478
+ R CD+C+D + + T TS+
Sbjct: 870 VQKRACDSCYDSMHETDLKLSSSSTTTTSS 899
>U23517-8|AAM98041.1| 605|Caenorhabditis elegans A kinase anchor
protein protein1, isoform c protein.
Length = 605
Score = 49.6 bits (113), Expect = 3e-06
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Frame = +2
Query: 203 LKESDAMFSADTAPEWADGEVCHRCRIA---FSLMVRRHHCRACGQVFCQQCSSKTSTL 370
L ES+ T+P W C C + F+++ RRHHCRACG+V C C ++ + L
Sbjct: 524 LTESELQLGK-TSPYWIPDSECPNCMLCNTRFTIITRRHHCRACGRVLCGSCCNEKAFL 581
>U40797-15|AAB37553.2| 1004|Caenorhabditis elegans Temporarily
assigned gene nameprotein 77 protein.
Length = 1004
Score = 48.8 bits (111), Expect = 5e-06
Identities = 20/50 (40%), Positives = 30/50 (60%)
Frame = +2
Query: 275 CRIAFSLMVRRHHCRACGQVFCQQCSSKTSTLPKFGIEKEVRVCDACFDK 424
C F+++ RRHHCR CG + C+ C + + L K+ K+ VC CFD+
Sbjct: 787 CSTEFNIINRRHHCRDCGWLICKFCKGQ-APLSKYDFTKQ-NVCSECFDR 834
>AC024777-3|AAF60562.3| 563|Caenorhabditis elegans Hypothetical
protein Y42H9AR.3 protein.
Length = 563
Score = 45.2 bits (102), Expect = 6e-05
Identities = 20/45 (44%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = +2
Query: 224 FSADTAPEWADGEV--CHRCRIAFSLMVRRHHCRACGQVFCQQCS 352
F + P D E C C F L RRHHCR CG+V C CS
Sbjct: 169 FEREVVPWLDDAEAVCCPLCASRFGLTRRRHHCRLCGRVLCHSCS 213
>Z75547-11|CAA99905.4| 394|Caenorhabditis elegans Hypothetical
protein R11D1.10a protein.
Length = 394
Score = 41.1 bits (92), Expect = 0.001
Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 4/75 (5%)
Frame = +2
Query: 266 CHRCRIAFSLMVRRHHCRACGQVFCQQCSSKTSTLPKFGIEKEVRVCDACFDKVS----R 433
C CR +SL+ R C C FC++C + +P + + VC+ C+ K+ +
Sbjct: 7 CTNCRTKYSLLNREAGCSNCALSFCKKCLPHRAIIPTLS-DLPMIVCNNCYQKLESAKMK 65
Query: 434 PPTSTAKLEITDTSN 478
P + + D SN
Sbjct: 66 PSATITSTPLPDNSN 80
>U13070-7|AAC46638.1| 414|Caenorhabditis elegans Rabaptin (rab
effector) protein 5 protein.
Length = 414
Score = 41.1 bits (92), Expect = 0.001
Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = +2
Query: 245 EWADG-EVCHRCRIAFSLMVRRHHCRACGQVFCQQCSSKTSTLPKFGIEKEVRVCDACFD 421
+W D + C C +F+ + + HC CG++FC C T+P + VC C
Sbjct: 342 QWDDDVDQCSNCDTSFARVKVKPHCLHCGRIFCMNCLK--DTVPSGPNHRPANVCKVCHT 399
Query: 422 KVSR 433
++R
Sbjct: 400 LLNR 403
>Z81546-10|CAH10812.1| 674|Caenorhabditis elegans Hypothetical
protein F53A2.8c protein.
Length = 674
Score = 38.7 bits (86), Expect = 0.005
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +2
Query: 275 CRIAFSLMV-RRHHCRACGQVFCQQCSSKTSTLPKFGIEKEVRVCDAC 415
CR FS + RR HC CG +FC++C K ++ RVCD C
Sbjct: 631 CRGEFSSTIERRIHCHLCGMIFCRRCL-------KVSADERERVCDKC 671
>Z81546-9|CAD45596.2| 782|Caenorhabditis elegans Hypothetical
protein F53A2.8b protein.
Length = 782
Score = 38.7 bits (86), Expect = 0.005
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +2
Query: 275 CRIAFSLMV-RRHHCRACGQVFCQQCSSKTSTLPKFGIEKEVRVCDAC 415
CR FS + RR HC CG +FC++C K ++ RVCD C
Sbjct: 739 CRGEFSSTIERRIHCHLCGMIFCRRCL-------KVSADERERVCDKC 779
>Z81546-8|CAB04456.1| 676|Caenorhabditis elegans Hypothetical
protein F53A2.8a protein.
Length = 676
Score = 38.7 bits (86), Expect = 0.005
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +2
Query: 275 CRIAFSLMV-RRHHCRACGQVFCQQCSSKTSTLPKFGIEKEVRVCDAC 415
CR FS + RR HC CG +FC++C K ++ RVCD C
Sbjct: 633 CRGEFSSTIERRIHCHLCGMIFCRRCL-------KVSADERERVCDKC 673
>AY313179-1|AAP79304.1| 782|Caenorhabditis elegans
myotubularin-related protein MTM-6B protein.
Length = 782
Score = 38.7 bits (86), Expect = 0.005
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +2
Query: 275 CRIAFSLMV-RRHHCRACGQVFCQQCSSKTSTLPKFGIEKEVRVCDAC 415
CR FS + RR HC CG +FC++C K ++ RVCD C
Sbjct: 739 CRGEFSSTIERRIHCHLCGMIFCRRCL-------KVSADERERVCDKC 779
>AY313177-1|AAP79302.1| 676|Caenorhabditis elegans
myotubularin-related protein MTM-6A protein.
Length = 676
Score = 38.7 bits (86), Expect = 0.005
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +2
Query: 275 CRIAFSLMV-RRHHCRACGQVFCQQCSSKTSTLPKFGIEKEVRVCDAC 415
CR FS + RR HC CG +FC++C K ++ RVCD C
Sbjct: 633 CRGEFSSTIERRIHCHLCGMIFCRRCL-------KVSADERERVCDKC 673
>Z30215-6|CAF31477.2| 1144|Caenorhabditis elegans Hypothetical protein
F40F12.5 protein.
Length = 1144
Score = 31.9 bits (69), Expect = 0.60
Identities = 21/70 (30%), Positives = 31/70 (44%)
Frame = +2
Query: 314 CRACGQVFCQQCSSKTSTLPKFGIEKEVRVCDACFDKVSRPPTSTAKLEITDTSNDYGPT 493
C+AC +V+C C L + EV C CF P ++E + + Y P
Sbjct: 961 CQACSEVYCPTC-----FLTRRVFYSEVIFCRKCFHHTHLLP----EIEDHKSRDLYPPG 1011
Query: 494 QPQKRPPGGK 523
+PQK+P K
Sbjct: 1012 KPQKKPHSHK 1021
>U00051-15|AAZ91344.1| 270|Caenorhabditis elegans Synaptotagmin
protein 2 protein.
Length = 270
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = +2
Query: 371 PKFGIEKEVRVCDACFDKVSRPPTSTAKLEITDTSN 478
P+ EKE R+ D CF RP T T L I + N
Sbjct: 108 PEKDDEKECRLGDICFSTRYRPATGTVTLTIMEARN 143
>U80442-6|AAB37669.1| 294|Caenorhabditis elegans Hypothetical
protein T20F5.7 protein.
Length = 294
Score = 28.3 bits (60), Expect = 7.4
Identities = 22/93 (23%), Positives = 32/93 (34%), Gaps = 2/93 (2%)
Frame = +2
Query: 251 ADGEVCHRCRIAFSLMVRRHHCRACGQVFCQQCSSKTSTLPKFGIEKEVRVCDACFDKVS 430
AD C C F R+ CG C++C T L F V C C
Sbjct: 10 ADLVTCLICIREFDTKTRKPKVLHCGHTVCEEC---TDNLRDFNAPLLVVRCPTCRQFTK 66
Query: 431 RP--PTSTAKLEITDTSNDYGPTQPQKRPPGGK 523
RP + ++ + + +K+ GGK
Sbjct: 67 RPVAESCNTNFQLMGYLAEKEKFEREKKAKGGK 99
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,984,177
Number of Sequences: 27780
Number of extensions: 219560
Number of successful extensions: 738
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 691
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 736
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2150453690
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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