Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP08_F_E24
(876 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC824.06 |tim14||TIM23 translocase complex subunit Tim14|Schiz... 55 1e-08
SPBC543.02c |||DNAJ/TPR domain protein DNAJC7 family|Schizosacch... 33 0.040
SPAC14C4.13 |rad17||RFC related checkpoint protein Rad17|Schizos... 32 0.093
SPBC1734.11 |||DNAJ domain protein Mas5 |Schizosaccharomyces pom... 32 0.12
SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyc... 31 0.28
SPBC1347.05c |||DNAJ domain protein Scj1|Schizosaccharomyces pom... 30 0.38
SPAC1071.09c |||DNAJ domain protein, DNAJC9 family|Schizosacchar... 29 0.87
SPAC4H3.01 |||DNAJ domain protein Caj1/Djp1 type|Schizosaccharom... 29 0.87
SPBC11B10.05c |rsp1||random septum position protein Rsp1|Schizos... 28 2.0
SPAC23E2.03c |ste7||meiotic suppressor protein Ste7|Schizosaccha... 27 2.7
SPCC4G3.14 |mdj1||DNAJ domain protein Mdj1 |Schizosaccharomyces ... 27 2.7
SPAC22F8.05 |||alpha,alpha-trehalose-phosphate synthase |Schizos... 27 3.5
SPAC30.01c |sec72|sec7b|Sec7 domain|Schizosaccharomyces pombe|ch... 26 6.1
SPAC3A12.06c |||sodium/calcium exchanger |Schizosaccharomyces po... 26 6.1
SPBC405.06 |||DNAJ protein Xdj1 |Schizosaccharomyces pombe|chr 2... 26 8.1
SPACUNK4.13c |||GTPase Ylf2 |Schizosaccharomyces pombe|chr 1|||M... 26 8.1
>SPAC824.06 |tim14||TIM23 translocase complex subunit
Tim14|Schizosaccharomyces pombe|chr 1|||Manual
Length = 140
Score = 55.2 bits (127), Expect = 1e-08
Identities = 36/97 (37%), Positives = 52/97 (53%), Gaps = 1/97 (1%)
Frame = +1
Query: 241 SSIILAGLGMAAVGFAGRYVLKQMPNASMKFAEAVKNLPKFDSETLANSKYYKGGFEPKM 420
SS IL G+G+AA AG+ V K+ + + KGGFE KM
Sbjct: 2 SSAILLGVGIAATAAAGKI--------------GVDAFRKYRNLNGGVKAFLKGGFESKM 47
Query: 421 TKREAALILGVSP-TASKAKIRDAHRKIMLLNHPDXG 528
++ EA IL ++ T ++ KI++AHR++ML NHPD G
Sbjct: 48 SRAEAIQILSLNNRTLTRQKIKEAHRRLMLANHPDRG 84
>SPBC543.02c |||DNAJ/TPR domain protein DNAJC7
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 476
Score = 33.5 bits (73), Expect = 0.040
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = +1
Query: 415 KMTKREAALILGVSPTASKAKIRDAHRKIMLLNHPD 522
K +++ ILGVS A+ +I+ A+RK+ L+ HPD
Sbjct: 344 KSKRKDHYKILGVSKEATDIEIKKAYRKLALVYHPD 379
>SPAC14C4.13 |rad17||RFC related checkpoint protein
Rad17|Schizosaccharomyces pombe|chr 1|||Manual
Length = 606
Score = 32.3 bits (70), Expect = 0.093
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +1
Query: 322 SMKFAEAVKNLPKFDSETLANSKYYKGGFEPKMTKRE 432
S++ A+ ++ L K DSE A K YK + PK K E
Sbjct: 351 SLEAAQVLERLSKSDSEAYARFKNYKSAYIPKSDKNE 387
>SPBC1734.11 |||DNAJ domain protein Mas5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 407
Score = 31.9 bits (69), Expect = 0.12
Identities = 13/27 (48%), Positives = 20/27 (74%)
Frame = +1
Query: 442 ILGVSPTASKAKIRDAHRKIMLLNHPD 522
+L V TAS+A+++ A+RK+ L HPD
Sbjct: 10 VLNVDVTASQAELKKAYRKLALKYHPD 36
>SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 379
Score = 30.7 bits (66), Expect = 0.28
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +1
Query: 445 LGVSPTASKAKIRDAHRKIMLLNHPD 522
L V P AS+A+++ A+RK+ L HPD
Sbjct: 11 LEVRPEASEAELKKAYRKLALKYHPD 36
>SPBC1347.05c |||DNAJ domain protein Scj1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 381
Score = 30.3 bits (65), Expect = 0.38
Identities = 14/27 (51%), Positives = 20/27 (74%)
Frame = +1
Query: 442 ILGVSPTASKAKIRDAHRKIMLLNHPD 522
ILGVS AS+++IR A+R++ HPD
Sbjct: 11 ILGVSKDASESEIRKAYRQLTKQWHPD 37
>SPAC1071.09c |||DNAJ domain protein, DNAJC9
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 282
Score = 29.1 bits (62), Expect = 0.87
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +1
Query: 442 ILGVSPTASKAKIRDAHRKIMLLNHPD 522
+LGV AS IR A+RK L +HPD
Sbjct: 35 VLGVEKDASDELIRRAYRKKALQHHPD 61
>SPAC4H3.01 |||DNAJ domain protein Caj1/Djp1
type|Schizosaccharomyces pombe|chr 1|||Manual
Length = 392
Score = 29.1 bits (62), Expect = 0.87
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = +1
Query: 442 ILGVSPTASKAKIRDAHRKIMLLNHPDXGWVTPHSSKDQ 558
+LG+S A+ I+ A+RK+ + HPD P + ++
Sbjct: 12 LLGISTDATAVDIKKAYRKLAVKYHPDKNPDDPQGASEK 50
>SPBC11B10.05c |rsp1||random septum position protein
Rsp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 494
Score = 27.9 bits (59), Expect = 2.0
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +1
Query: 442 ILGVSPTASKAKIRDAHRKIMLLNHPD 522
ILG T+S +IR + K++L HPD
Sbjct: 16 ILGAESTSSYVEIRQQYLKLVLRYHPD 42
>SPAC23E2.03c |ste7||meiotic suppressor protein
Ste7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 569
Score = 27.5 bits (58), Expect = 2.7
Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 4/70 (5%)
Frame = +1
Query: 316 NASMKFAEAVKN--LPKFDSETLANSKYYKGGF--EPKMTKREAALILGVSPTASKAKIR 483
+A+ F + K LP+FDS T + S Y + F P +A T+S + +
Sbjct: 158 SANSSFGSSAKTFQLPEFDSVTPSASLYKQPSFNSNPAPITTSSATHTSQFSTSSSSSVN 217
Query: 484 DAHRKIMLLN 513
H +M+ N
Sbjct: 218 SVHTPVMVPN 227
>SPCC4G3.14 |mdj1||DNAJ domain protein Mdj1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 528
Score = 27.5 bits (58), Expect = 2.7
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +1
Query: 445 LGVSPTASKAKIRDAHRKIMLLNHPD 522
LGVS +AS ++I+ A+ K+ HPD
Sbjct: 91 LGVSKSASASEIKSAYYKLAKQYHPD 116
>SPAC22F8.05 |||alpha,alpha-trehalose-phosphate synthase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 891
Score = 27.1 bits (57), Expect = 3.5
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 176 VHTSDYEFVCYQNHLIRRLLW 238
V+TSD F + NH R++LW
Sbjct: 225 VYTSDSNFEGHYNHYCRKILW 245
>SPAC30.01c |sec72|sec7b|Sec7 domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1822
Score = 26.2 bits (55), Expect = 6.1
Identities = 13/60 (21%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = -2
Query: 251 IIELAIITCVSNGFDNKQIHNHLCVQ-ITE*VLLIFSIFNFVFRLDLDTIYKIKVVVILF 75
I++L +I+ V+ DN+++ NH+ + + + + I+ + F + + D +I ++ + F
Sbjct: 1626 ILQLLLISIVAELLDNEEVFNHIPHEHVLKITVAIYDSWQFARKFNEDKSLRITLLNVGF 1685
>SPAC3A12.06c |||sodium/calcium exchanger |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 743
Score = 26.2 bits (55), Expect = 6.1
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = -1
Query: 591 DFPLSSRSLASLIFAAMR 538
DFPL S SL+SL+F +R
Sbjct: 452 DFPLPSPSLSSLLFPTLR 469
>SPBC405.06 |||DNAJ protein Xdj1 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 413
Score = 25.8 bits (54), Expect = 8.1
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = +1
Query: 442 ILGVSPTASKAKIRDAHRKIMLLNHPD 522
IL V AS +I+ +++++ LL+HPD
Sbjct: 10 ILEVHFEASAEEIKKSYKRLALLHHPD 36
>SPACUNK4.13c |||GTPase Ylf2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 407
Score = 25.8 bits (54), Expect = 8.1
Identities = 18/49 (36%), Positives = 24/49 (48%)
Frame = -2
Query: 455 LTPKIRAASLFVIFGSNPPL*YLEFANVSESNLGKFFTASANFIEAFGI 309
LTP+ AA G N L + A S NL +FTAS ++A+ I
Sbjct: 292 LTPE-EAAQECASLGKNSQLSEIICAGYSALNLIHYFTASEKIVQAWTI 339
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,667,456
Number of Sequences: 5004
Number of extensions: 48859
Number of successful extensions: 106
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 104
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 106
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 438479610
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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