Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP08_F_E24
         (876 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U80438-2|AAB37632.1|  112|Caenorhabditis elegans Dnaj domain (pr...    94   1e-19
Z36238-2|CAA85274.1|  378|Caenorhabditis elegans Hypothetical pr...    41   0.001
Z92834-5|CAB07390.1|  402|Caenorhabditis elegans Hypothetical pr...    31   0.82 
U88181-2|AAB42303.1|  491|Caenorhabditis elegans Dnaj domain (pr...    31   1.1  
U00058-4|AAD31932.3|  249|Caenorhabditis elegans Dnaj domain (pr...    30   2.5  
Z66513-5|CAA91334.1|  331|Caenorhabditis elegans Hypothetical pr...    29   4.4  
AC024811-1|AAF60776.1|  494|Caenorhabditis elegans Dnaj domain (...    29   4.4  
U40415-10|AAK39254.1|  215|Caenorhabditis elegans Dnaj domain (p...    29   5.8  

>U80438-2|AAB37632.1|  112|Caenorhabditis elegans Dnaj domain
           (prokaryotic heat shockprotein) protein 21 protein.
          Length = 112

 Score = 94.3 bits (224), Expect = 1e-19
 Identities = 48/98 (48%), Positives = 69/98 (70%)
 Frame = +1

Query: 235 MASSIILAGLGMAAVGFAGRYVLKQMPNASMKFAEAVKNLPKFDSETLANSKYYKGGFEP 414
           M   +I+AGLG+AAVGF  RYVL+    A +K  + ++ +P       A S YY+GGF+ 
Sbjct: 1   MTGGLIVAGLGLAAVGFGARYVLRNQ--ALIK--KGMEAIPVAGG---AFSNYYRGGFDQ 53

Query: 415 KMTKREAALILGVSPTASKAKIRDAHRKIMLLNHPDXG 528
           KM++ EAA ILGV+P+A  AKI++AH+K+M++NHPD G
Sbjct: 54  KMSRAEAAKILGVAPSAKPAKIKEAHKKVMIVNHPDRG 91



 Score = 31.1 bits (67), Expect = 1.1
 Identities = 14/16 (87%), Positives = 15/16 (93%)
 Frame = +2

Query: 545 AAKINEAKDLLESGKS 592
           AAKINEAKDL+ES KS
Sbjct: 97  AAKINEAKDLMESSKS 112


>Z36238-2|CAA85274.1|  378|Caenorhabditis elegans Hypothetical
           protein R74.4 protein.
          Length = 378

 Score = 40.7 bits (91), Expect = 0.001
 Identities = 20/57 (35%), Positives = 34/57 (59%)
 Frame = +1

Query: 385 SKYYKGGFEPKMTKREAALILGVSPTASKAKIRDAHRKIMLLNHPDXGWVTPHSSKD 555
           SK    G +PK+++ +   +LGV   AS+A+I+ A+RK+ L  HPD      H+ ++
Sbjct: 2   SKATTPGDQPKVSEMDFYQLLGVEKMASEAEIKSAYRKLALKYHPDRNPNDAHAQEE 58


>Z92834-5|CAB07390.1|  402|Caenorhabditis elegans Hypothetical
           protein F39B2.10 protein.
          Length = 402

 Score = 31.5 bits (68), Expect = 0.82
 Identities = 13/27 (48%), Positives = 19/27 (70%)
 Frame = +1

Query: 442 ILGVSPTASKAKIRDAHRKIMLLNHPD 522
           +LGV P AS  +++ A+RK+ L  HPD
Sbjct: 10  VLGVKPDASDNELKKAYRKMALKFHPD 36


>U88181-2|AAB42303.1|  491|Caenorhabditis elegans Dnaj domain
           (prokaryotic heat shockprotein) protein 7 protein.
          Length = 491

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 16/33 (48%), Positives = 20/33 (60%)
 Frame = +1

Query: 424 KREAALILGVSPTASKAKIRDAHRKIMLLNHPD 522
           KR+   ILGV   ASK +I  A+RK+    HPD
Sbjct: 377 KRDYYKILGVKRNASKREITKAYRKLAQKWHPD 409


>U00058-4|AAD31932.3|  249|Caenorhabditis elegans Dnaj domain
           (prokaryotic heat shockprotein) protein 24 protein.
          Length = 249

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = +1

Query: 439 LILGVSPTASKAKIRDAHRKIMLLNHPD 522
           + LG+S T+   +I+ A+RK+ L  HPD
Sbjct: 10  ITLGISSTSDDVEIKKAYRKLALKWHPD 37


>Z66513-5|CAA91334.1|  331|Caenorhabditis elegans Hypothetical
           protein F54D5.8 protein.
          Length = 331

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 12/27 (44%), Positives = 19/27 (70%)
 Frame = +1

Query: 442 ILGVSPTASKAKIRDAHRKIMLLNHPD 522
           +LG+S  A+  +I+ A+RK+ L  HPD
Sbjct: 8   VLGISKGATDDEIKKAYRKMALKYHPD 34


>AC024811-1|AAF60776.1|  494|Caenorhabditis elegans Dnaj domain
           (prokaryotic heat shockprotein) protein 28 protein.
          Length = 494

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 15/33 (45%), Positives = 20/33 (60%)
 Frame = +1

Query: 424 KREAALILGVSPTASKAKIRDAHRKIMLLNHPD 522
           KR+   ILGV   A+K +I  A+RK+    HPD
Sbjct: 378 KRDYYKILGVRRNANKREITKAYRKMAQKWHPD 410


>U40415-10|AAK39254.1|  215|Caenorhabditis elegans Dnaj domain
           (prokaryotic heat shockprotein) protein 14 protein.
          Length = 215

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = +1

Query: 442 ILGVSPTASKAKIRDAHRKIMLLNHPD 522
           +LG+   A+  +I+ A+RK+ L  HPD
Sbjct: 42  VLGIQKNATDDEIKKAYRKLALRYHPD 68


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,621,812
Number of Sequences: 27780
Number of extensions: 266608
Number of successful extensions: 528
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 514
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 525
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)