Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP08_F_E23
         (874 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_04_0204 - 19022329-19023990                                         29   3.7  
12_02_0969 - 24936399-24936699,24936779-24936949,24937032-249378...    28   8.5  
10_08_0786 - 20540061-20542106                                         28   8.5  
06_03_0771 + 24473176-24473203,24473292-24474025,24474104-244745...    28   8.5  
06_02_0270 - 13613853-13614153,13614233-13614403,13614486-136153...    28   8.5  
06_01_1148 + 9629630-9629759,9629848-9630581,9630660-9631121,963...    28   8.5  
05_07_0218 + 28470325-28470454,28470543-28471276,28471355-284718...    28   8.5  
02_05_0268 - 27302734-27303034,27303114-27303284,27303367-273041...    28   8.5  
01_02_0132 + 11444480-11444609,11444698-11445131,11445210-114454...    28   8.5  

>05_04_0204 - 19022329-19023990
          Length = 553

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = +2

Query: 287 IEKSCDKYMNVDVVKXFMEMYKMGXLPRGETF 382
           + K CD++  + VVK F +M K G  P   TF
Sbjct: 355 MRKLCDEHRWLSVVKLFTDMAKKGIAPNSWTF 386


>12_02_0969 -
           24936399-24936699,24936779-24936949,24937032-24937852,
           24937946-24938407,24938486-24938890
          Length = 719

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = -3

Query: 131 LRLTPRPSRPVVLEPSCLKNSLSA 60
           +++TPRPSRP    PS  K S+ A
Sbjct: 372 VKMTPRPSRPTEFTPSKSKLSIEA 395


>10_08_0786 - 20540061-20542106
          Length = 681

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 16/42 (38%), Positives = 24/42 (57%)
 Frame = +2

Query: 323 VVKXFMEMYKMGXLPRGETFVHTNELQMEEAVKVFRVLYYAK 448
           V K  +EM KMG +PR E   H     +EE VK  ++ Y+++
Sbjct: 578 VAKLDLEMRKMGYIPRTEFVYH----DLEEEVKEQQLSYHSE 615


>06_03_0771 +
           24473176-24473203,24473292-24474025,24474104-24474565,
           24474647-24475479,24475562-24475732,24475812-24476112
          Length = 842

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = -3

Query: 131 LRLTPRPSRPVVLEPSCLKNSLSA 60
           +++TPRPSRP+ L P   K S+ A
Sbjct: 495 VKMTPRPSRPMELTPPKSKLSIEA 518


>06_02_0270 -
           13613853-13614153,13614233-13614403,13614486-13615318,
           13615401-13615746,13615940-13616127,13616238-13616408
          Length = 669

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = -3

Query: 131 LRLTPRPSRPVVLEPSCLKNSLSA 60
           +++TPRPSRP+ L P   K S+ A
Sbjct: 322 VKMTPRPSRPMELTPPKSKLSIEA 345


>06_01_1148 +
           9629630-9629759,9629848-9630581,9630660-9631121,
           9631203-9632035,9632118-9632288,9632368-9632668
          Length = 876

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = -3

Query: 131 LRLTPRPSRPVVLEPSCLKNSLSA 60
           +++TPRPSRP  L P   K S+ A
Sbjct: 529 VKMTPRPSRPTELTPPKCKLSIEA 552


>05_07_0218 +
           28470325-28470454,28470543-28471276,28471355-28471816,
           28471898-28472730,28472813-28472983,28473063-28473180
          Length = 815

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = -3

Query: 131 LRLTPRPSRPVVLEPSCLKNSLSA 60
           +++TPRPSRP  L P   K S+ A
Sbjct: 529 VKMTPRPSRPTELTPPKCKLSIEA 552


>02_05_0268 -
           27302734-27303034,27303114-27303284,27303367-27304199,
           27304281-27304742,27304821-27305554,27305643-27305772
          Length = 876

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = -3

Query: 131 LRLTPRPSRPVVLEPSCLKNSLSA 60
           +++TPRPSRP  L P   K S+ A
Sbjct: 529 VKMTPRPSRPTELTPPKCKLSIEA 552


>01_02_0132 +
           11444480-11444609,11444698-11445131,11445210-11445431,
           11445510-11445971,11446053-11446885,11446968-11447138,
           11447218-11447518
          Length = 850

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = -3

Query: 131 LRLTPRPSRPVVLEPSCLKNSLSA 60
           +++TPRPSRP  L P   K S+ A
Sbjct: 503 VKMTPRPSRPTELTPPKCKLSIEA 526


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,181,297
Number of Sequences: 37544
Number of extensions: 260477
Number of successful extensions: 543
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 540
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 543
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2456227356
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)